RNA–Protein interactions for RNA: YOL038W

PRE6, Transcript of Alpha 4 subunit of the 20S proteasome, yeastyeast

Gene PRE6, Length 765 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE6YOL038W AIR1P40507 360 aaKnown RBP9.11□□□□□ -0.95
PRE6YOL038W SLS1P42900 643 aa9.11□□□□□ -0.95
PRE6YOL038W IRC5P43610 853 aa9.11□□□□□ -0.95
PRE6YOL038W SBH2P52871 88 aa9.11□□□□□ -0.95
PRE6YOL038W HOT1Q03213 719 aa9.11□□□□□ -0.95
PRE6YOL038W RSA3Q05942 220 aaKnown RBP9.11□□□□□ -0.95
PRE6YOL038W RDL1Q12305 139 aaKnown RBP9.11□□□□□ -0.95
PRE6YOL038W SPO24Q3E752 67 aa9.11□□□□□ -0.95
PRE6YOL038W RIB3Q99258 208 aa9.11□□□□□ -0.95
PRE6YOL038W COX5BP00425 151 aa9.1□□□□□ -0.95
PRE6YOL038W RPS13P05756 151 aaKnown RBP9.1□□□□□ -0.95
PRE6YOL038W RPS23AP0CX29 145 aaKnown RBP9.1□□□□□ -0.95
PRE6YOL038W RPS23BP0CX30 145 aa9.1□□□□□ -0.95
PRE6YOL038W APL3P38065 1025 aa9.1□□□□□ -0.95
PRE6YOL038W FLX1P40464 311 aa9.1□□□□□ -0.95
PRE6YOL038W GLR1P41921 483 aaKnown RBP9.1□□□□□ -0.95
PRE6YOL038W SMP3Q04174 516 aa9.1□□□□□ -0.95
PRE6YOL038W MRPL51Q06090 140 aaPredicted RBP9.1□□□□□ -0.95
PRE6YOL038W YLR040CQ07988 224 aa9.1□□□□□ -0.95
PRE6YOL038W YPL119C-AQ3E751 87 aa9.1□□□□□ -0.95
PRE6YOL038W CLB2P24869 491 aa9.09□□□□□ -0.95
PRE6YOL038W VBA2P38358 474 aaKnown RBP9.09□□□□□ -0.95
PRE6YOL038W SLZ1P40167 298 aa9.09□□□□□ -0.95
PRE6YOL038W YRB2P40517 327 aa9.09□□□□□ -0.95
PRE6YOL038W SAM37P50110 327 aa9.09□□□□□ -0.95
PRE6YOL038W SYC1Q08553 188 aaPredicted RBP9.09□□□□□ -0.95
PRE6YOL038W YER121WP40076 114 aa9.08□□□□□ -0.96
PRE6YOL038W PDS1P40316 373 aaPredicted RBP9.08□□□□□ -0.96
PRE6YOL038W YMR099CQ03161 297 aaKnown RBP9.08□□□□□ -0.96
PRE6YOL038W AIM36Q03798 255 aa9.08□□□□□ -0.96
PRE6YOL038W YDR391CQ04170 232 aa9.08□□□□□ -0.96
PRE6YOL038W TPK3P05986 398 aa9.07□□□□□ -0.96
PRE6YOL038W SAM35P14693 329 aa9.07□□□□□ -0.96
PRE6YOL038W KRR1P25586 316 aaPredicted RBP9.07□□□□□ -0.96
PRE6YOL038W YME2P32843 850 aa9.07□□□□□ -0.96
PRE6YOL038W ECM8P38246 354 aa9.07□□□□□ -0.96
PRE6YOL038W GVP36P40531 326 aaKnown RBP9.07□□□□□ -0.96
PRE6YOL038W OST1P41543 476 aaKnown RBP9.07□□□□□ -0.96
PRE6YOL038W TPO3Q06451 622 aa9.07□□□□□ -0.96
PRE6YOL038W YGR161W-CQ3E744 92 aa9.07□□□□□ -0.96
PRE6YOL038W FSH3Q99369 266 aa9.07□□□□□ -0.96
PRE6YOL038W KIN28P06242 306 aa9.06□□□□□ -0.96
PRE6YOL038W OAC1P32332 324 aa9.06□□□□□ -0.96
PRE6YOL038W PHO90P39535 881 aa9.06□□□□□ -0.96
PRE6YOL038W YCK3P39962 524 aa9.06□□□□□ -0.96
PRE6YOL038W HIS6P40545 261 aa9.06□□□□□ -0.96
PRE6YOL038W SFH5P47008 294 aa9.06□□□□□ -0.96
PRE6YOL038W YJL055WP47044 245 aa9.06□□□□□ -0.96
PRE6YOL038W BRE4Q07660 1125 aa9.06□□□□□ -0.96
PRE6YOL038W RRS1Q08746 203 aaKnown RBP9.06□□□□□ -0.96
PRE6YOL038W ACF2Q12168 779 aa9.06□□□□□ -0.96
PRE6YOL038W FRE8Q12209 686 aa9.06□□□□□ -0.96
PRE6YOL038W MSW1P04803 379 aa9.05□□□□□ -0.96
PRE6YOL038W PDE2P06776 526 aa9.05□□□□□ -0.96
PRE6YOL038W MEK1P24719 497 aaPredicted RBP9.05□□□□□ -0.96
PRE6YOL038W RPC34P32910 317 aa9.05□□□□□ -0.96
PRE6YOL038W TAT1P38085 619 aa9.05□□□□□ -0.96
PRE6YOL038W YBR096WP38256 230 aa9.05□□□□□ -0.96
PRE6YOL038W YBR138CP38277 524 aa9.05□□□□□ -0.96
PRE6YOL038W ATF1P40353 525 aa9.05□□□□□ -0.96
PRE6YOL038W LOH1P47055 219 aa9.05□□□□□ -0.96
PRE6YOL038W NQM1P53228 333 aaPredicted RBP9.05□□□□□ -0.96
PRE6YOL038W MSS11Q03825 758 aa9.05□□□□□ -0.96
PRE6YOL038W SPC19Q03954 165 aa9.05□□□□□ -0.96
PRE6YOL038W RNH1Q04740 348 aa9.05□□□□□ -0.96
PRE6YOL038W NNT1Q05874 261 aa9.05□□□□□ -0.96
PRE6YOL038W YLR108CQ12259 485 aa9.05□□□□□ -0.96
PRE6YOL038W YCL048W-AQ2V2Q2 79 aa9.05□□□□□ -0.96
PRE6YOL038W CCW14O13547 238 aa9.04□□□□□ -0.96
PRE6YOL038W REP1P03871 373 aa9.04□□□□□ -0.96
PRE6YOL038W RPL39P04650 51 aa9.04□□□□□ -0.96
PRE6YOL038W DSF1P0CX08 502 aa9.04□□□□□ -0.96
PRE6YOL038W YNR073CP0CX09 502 aa9.04□□□□□ -0.96
PRE6YOL038W PHO80P20052 293 aa9.04□□□□□ -0.96
PRE6YOL038W DBF2P22204 572 aa9.04□□□□□ -0.96
PRE6YOL038W CLG1P35190 452 aa9.04□□□□□ -0.96
PRE6YOL038W CTR2P38865 189 aa9.04□□□□□ -0.96
PRE6YOL038W LAP3Q01532 483 aaKnown RBP RIP-Chip data9.04□□□□□ -0.96not detected
PRE6YOL038W GRX5Q02784 150 aa9.04□□□□□ -0.96
PRE6YOL038W MLC2Q06580 163 aa9.04□□□□□ -0.96
PRE6YOL038W MES1P00958 751 aaKnown RBP9.03□□□□□ -0.96
PRE6YOL038W RPS5P26783 225 aaKnown RBP9.03□□□□□ -0.96
PRE6YOL038W PRP21P32524 280 aaPredicted RBP9.03□□□□□ -0.96
PRE6YOL038W SRP102P36057 244 aaPredicted RBP9.03□□□□□ -0.96
PRE6YOL038W DTR1P38125 572 aa9.03□□□□□ -0.96
PRE6YOL038W SSZ1P38788 538 aaKnown RBP9.03□□□□□ -0.96
PRE6YOL038W SWP82P43554 623 aa9.03□□□□□ -0.96
PRE6YOL038W SAY1P53324 424 aa9.03□□□□□ -0.96
PRE6YOL038W COG5P53951 403 aa9.03□□□□□ -0.96
PRE6YOL038W SNZ1Q03148 297 aa9.03□□□□□ -0.96
PRE6YOL038W YMD8Q03697 442 aa9.03□□□□□ -0.96
PRE6YOL038W RPL6BP05739 176 aaKnown RBP9.02□□□□□ -0.97
PRE6YOL038W RPB9P27999 122 aa9.02□□□□□ -0.97
PRE6YOL038W BAP2P38084 609 aa9.02□□□□□ -0.97
PRE6YOL038W YHL044WP38727 235 aa9.02□□□□□ -0.97
PRE6YOL038W MSS4P38994 779 aa9.02□□□□□ -0.97
PRE6YOL038W TYW3P53177 273 aa9.02□□□□□ -0.97
PRE6YOL038W VOA1P53262 265 aa9.02□□□□□ -0.97
PRE6YOL038W APJ1P53940 528 aa9.02□□□□□ -0.97
PRE6YOL038W YNL046WP53956 172 aa9.02□□□□□ -0.97
Retrieved 100 of 5,963 RNA–protein pairs in 11.3 ms