RNA–Protein interactions for RNA: YNR007C

ATG3, Transcript of E2-like enzyme, yeast

Gene ATG3, Length 933 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ATG3	YNR007C	GPI15	P53961	229 aa		2.62	□□□□□ -1.99
ATG3	YNR007C	YLR460C	P54007	376 aa		2.62	□□□□□ -1.99
ATG3	YNR007C	YDR541C	Q03049	344 aa		2.62	□□□□□ -1.99
ATG3	YNR007C	MMT1	Q03218	510 aa		2.62	□□□□□ -1.99
ATG3	YNR007C	YMR181C	Q03231	154 aa		2.62	□□□□□ -1.99
ATG3	YNR007C	RSN1	Q03516	953 aa		2.62	□□□□□ -1.99
ATG3	YNR007C	CSN9	Q03981	162 aa		2.62	□□□□□ -1.99
ATG3	YNR007C	RRP40	Q08285	240 aa	Known RBP	2.62	□□□□□ -1.99
ATG3	YNR007C	YOR376W	Q08900	122 aa		2.62	□□□□□ -1.99
ATG3	YNR007C	YLR053C	Q12026	108 aa		2.62	□□□□□ -1.99
ATG3	YNR007C	RPN5	Q12250	445 aa	Known RBP	2.62	□□□□□ -1.99
ATG3	YNR007C	COS2	P0CX12	379 aa		2.61	□□□□□ -1.99
ATG3	YNR007C	COS3	P0CX13	379 aa		2.61	□□□□□ -1.99
ATG3	YNR007C	RNA1	P11745	407 aa	Known RBP	2.61	□□□□□ -1.99
ATG3	YNR007C	CPR1	P14832	162 aa	Known RBP	2.61	□□□□□ -1.99
ATG3	YNR007C	RPB5	P20434	215 aa		2.61	□□□□□ -1.99
ATG3	YNR007C	SEC14	P24280	304 aa	Known RBP	2.61	□□□□□ -1.99
ATG3	YNR007C	SSE1	P32589	693 aa	Known RBP	2.61	□□□□□ -1.99
ATG3	YNR007C	SPO23	P33757	523 aa		2.61	□□□□□ -1.99
ATG3	YNR007C	RPS27A	P35997	82 aa	Known RBP	2.61	□□□□□ -1.99
ATG3	YNR007C	NAT2	P37293	288 aa		2.61	□□□□□ -1.99
ATG3	YNR007C	MIX23	P38162	196 aa		2.61	□□□□□ -1.99
ATG3	YNR007C	RPS27B	P38711	82 aa		2.61	□□□□□ -1.99
ATG3	YNR007C	GDI1	P39958	451 aa	Known RBP	2.61	□□□□□ -1.99
ATG3	YNR007C	SMX2	P40204	77 aa	Known RBP	2.61	□□□□□ -1.99
ATG3	YNR007C	COA1	P40452	197 aa		2.61	□□□□□ -1.99
ATG3	YNR007C	RPL10	P41805	221 aa	Known RBP	2.61	□□□□□ -1.99
ATG3	YNR007C	YFL067W	P43537	175 aa		2.61	□□□□□ -1.99
ATG3	YNR007C	COS4	P43542	379 aa		2.61	□□□□□ -1.99
ATG3	YNR007C	MNN5	P46982	586 aa		2.61	□□□□□ -1.99
ATG3	YNR007C	BIO3	P50277	480 aa		2.61	□□□□□ -1.99
ATG3	YNR007C	TAF6	P53040	516 aa		2.61	□□□□□ -1.99
ATG3	YNR007C	RPN14	P53196	417 aa		2.61	□□□□□ -1.99
ATG3	YNR007C	OCA2	P53949	197 aa		2.61	□□□□□ -1.99
ATG3	YNR007C	OAZ1	Q02803	292 aa		2.61	□□□□□ -1.99
ATG3	YNR007C	YMR209C	Q03648	457 aa		2.61	□□□□□ -1.99
ATG3	YNR007C	CGI121	Q03705	181 aa	Known RBP	2.61	□□□□□ -1.99
ATG3	YNR007C	URC2	Q04411	772 aa		2.61	□□□□□ -1.99
ATG3	YNR007C	PAL1	Q05518	499 aa	Known RBP	2.61	□□□□□ -1.99
ATG3	YNR007C	MMT2	Q08970	484 aa		2.61	□□□□□ -1.99
ATG3	YNR007C	YPR022C	Q12139	1133 aa		2.61	□□□□□ -1.99
ATG3	YNR007C	YPL245W	Q12179	454 aa	Known RBP	2.61	□□□□□ -1.99
ATG3	YNR007C	YOR214C	Q12282	236 aa		2.61	□□□□□ -1.99
ATG3	YNR007C	ORT1	Q12375	292 aa		2.61	□□□□□ -1.99
ATG3	YNR007C	YMR030W-A	Q3E760	96 aa		2.61	□□□□□ -1.99
ATG3	YNR007C	SAS5	Q99314	248 aa		2.61	□□□□□ -1.99
ATG3	YNR007C	MET2	P08465	486 aa		2.6	□□□□□ -1.99
ATG3	YNR007C	YSF3	P0C074	85 aa	Predicted RBP	2.6	□□□□□ -1.99
ATG3	YNR007C	DBP3	P20447	523 aa	Known RBP	2.6	□□□□□ -1.99
ATG3	YNR007C	TRX3	P25372	127 aa		2.6	□□□□□ -1.99
ATG3	YNR007C	CHA1	P25379	360 aa	Known RBP	2.6	□□□□□ -1.99
ATG3	YNR007C	ATG15	P25641	520 aa		2.6	□□□□□ -1.99
ATG3	YNR007C	MDL1	P33310	695 aa		2.6	□□□□□ -1.99
ATG3	YNR007C	YOR062C	P36025	268 aa		2.6	□□□□□ -1.99
ATG3	YNR007C	ZTA1	P38230	334 aa	Known RBP	2.6	□□□□□ -1.99
ATG3	YNR007C	PHO89	P38361	574 aa		2.6	□□□□□ -1.99
ATG3	YNR007C	RRP4	P38792	359 aa	Known RBP	2.6	□□□□□ -1.99
ATG3	YNR007C	MTC6	P38849	526 aa		2.6	□□□□□ -1.99
ATG3	YNR007C	GAT2	P40209	560 aa		2.6	□□□□□ -1.99
ATG3	YNR007C	PMT4	P46971	762 aa		2.6	□□□□□ -1.99
ATG3	YNR007C	ALB1	P47019	175 aa	Predicted RBP	2.6	□□□□□ -1.99
ATG3	YNR007C	EMC2	P47133	292 aa	Known RBP	2.6	□□□□□ -1.99
ATG3	YNR007C	JHD2	P47156	728 aa	Predicted RBP	2.6	□□□□□ -1.99
ATG3	YNR007C	ATP22	P50273	684 aa	Predicted RBP	2.6	□□□□□ -1.99
ATG3	YNR007C	BIO4	P53630	237 aa		2.6	□□□□□ -1.99
ATG3	YNR007C	YDR476C	Q03362	224 aa		2.6	□□□□□ -1.99
ATG3	YNR007C	YDR209C	Q03480	137 aa		2.6	□□□□□ -1.99
ATG3	YNR007C	BET5	Q03630	159 aa		2.6	□□□□□ -1.99
ATG3	YNR007C	YDR249C	Q03787	373 aa		2.6	□□□□□ -1.99
ATG3	YNR007C	DCR2	Q05924	578 aa		2.6	□□□□□ -1.99
ATG3	YNR007C	YPR174C	Q06616	221 aa	Predicted RBP	2.6	□□□□□ -1.99
ATG3	YNR007C	YLL007C	Q07799	665 aa		2.6	□□□□□ -1.99
ATG3	YNR007C	YLR108C	Q12259	485 aa		2.6	□□□□□ -1.99
ATG3	YNR007C	YPR064W	Q12492	139 aa		2.6	□□□□□ -1.99
ATG3	YNR007C	SPO24	Q3E752	67 aa		2.6	□□□□□ -1.99
ATG3	YNR007C	CAR2	P07991	424 aa	Known RBP	2.59	□□□□□ -1.99
ATG3	YNR007C	YFR010W-A	P0C5N0	62 aa		2.59	□□□□□ -1.99
ATG3	YNR007C	DBR1	P24309	405 aa	Known RBP	2.59	□□□□□ -1.99
ATG3	YNR007C	YCL042W	P25572	119 aa		2.59	□□□□□ -1.99
ATG3	YNR007C	BUB2	P26448	306 aa	Predicted RBP	2.59	□□□□□ -1.99
ATG3	YNR007C	TPO5	P36029	618 aa		2.59	□□□□□ -1.99
ATG3	YNR007C	CAF4	P36130	643 aa		2.59	□□□□□ -1.99
ATG3	YNR007C	RIB5	P38145	238 aa		2.59	□□□□□ -1.99
ATG3	YNR007C	GDT1	P38301	280 aa	Predicted RBP	2.59	□□□□□ -1.99
ATG3	YNR007C	PTH1	P38876	190 aa	Known RBP	2.59	□□□□□ -1.99
ATG3	YNR007C	AYR1	P40471	297 aa		2.59	□□□□□ -1.99
ATG3	YNR007C	CUS2	P53830	285 aa	Predicted RBP	2.59	□□□□□ -1.99
ATG3	YNR007C	WSC2	P53832	503 aa		2.59	□□□□□ -1.99
ATG3	YNR007C	MET31	Q03081	177 aa		2.59	□□□□□ -1.99
ATG3	YNR007C	GAS3	Q03655	524 aa		2.59	□□□□□ -1.99
ATG3	YNR007C	TVP15	Q03860	143 aa		2.59	□□□□□ -1.99
ATG3	YNR007C	RRB1	Q04225	511 aa	Known RBP	2.59	□□□□□ -1.99
ATG3	YNR007C	FAR8	Q05040	523 aa		2.59	□□□□□ -1.99
ATG3	YNR007C	FAR10	Q06001	478 aa		2.59	□□□□□ -1.99
ATG3	YNR007C	RIF2	Q06208	395 aa		2.59	□□□□□ -1.99
ATG3	YNR007C	NDL1	Q06568	189 aa		2.59	□□□□□ -1.99
ATG3	YNR007C	THP3	Q12049	470 aa	Known RBP	2.59	□□□□□ -1.99
ATG3	YNR007C	NCA2	Q12374	616 aa		2.59	□□□□□ -1.99
ATG3	YNR007C	YPL247C	Q12523	523 aa		2.59	□□□□□ -1.99
ATG3	YNR007C	MHT1	Q12525	324 aa		2.59	□□□□□ -1.99

Retrieved 100 of 5,963 RNA–protein pairs in 54.2 ms