RNA–Protein interactions for RNA: YNL330C

RPD3, Transcript of Histone deacetylase, component of both the Rpd3S and Rpd3L complexes, yeastyeast

Gene RPD3, Length 1,302 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPD3YNL330C CNB1P25296 175 aa7.83□□□□□ -1.16
RPD3YNL330C MDH3P32419 343 aaKnown RBP RIP-Chip data7.83□□□□□ -1.16not detected
RPD3YNL330C COS8P38723 381 aa7.83□□□□□ -1.16
RPD3YNL330C SYS1P41544 203 aa7.83□□□□□ -1.16
RPD3YNL330C SLS1P42900 643 aa7.83□□□□□ -1.16
RPD3YNL330C YOR385WQ08909 290 aa7.83□□□□□ -1.16
RPD3YNL330C YOS9Q99220 542 aa7.83□□□□□ -1.16
RPD3YNL330C TAO3P40468 2376 aa7.83□□□□□ -1.16
RPD3YNL330C NUP1P20676 1076 aa7.82□□□□□ -1.16
RPD3YNL330C CWH43P25618 953 aa7.82□□□□□ -1.16
RPD3YNL330C IMG2P25642 146 aaPredicted RBP7.82□□□□□ -1.16
RPD3YNL330C TRS65P32893 560 aa7.82□□□□□ -1.16
RPD3YNL330C PDC2P32896 925 aa7.82□□□□□ -1.16
RPD3YNL330C LSM12P38828 187 aaKnown RBP7.82□□□□□ -1.16
RPD3YNL330C ELO1P39540 310 aa7.82□□□□□ -1.16
RPD3YNL330C BMT5P40493 336 aa7.82□□□□□ -1.16
RPD3YNL330C LSB3P43603 459 aaKnown RBP7.82□□□□□ -1.16
RPD3YNL330C LYS20P48570 428 aaKnown RBP7.82□□□□□ -1.16
RPD3YNL330C PHB2P50085 310 aa7.82□□□□□ -1.16
RPD3YNL330C RSM27P53305 110 aa7.82□□□□□ -1.16
RPD3YNL330C ARG5,6Q01217 863 aa7.82□□□□□ -1.16
RPD3YNL330C YDR444WQ04093 687 aa7.82□□□□□ -1.16
RPD3YNL330C MRPL51Q06090 140 aaPredicted RBP7.82□□□□□ -1.16
RPD3YNL330C YLR352WQ06479 807 aa7.82□□□□□ -1.16
RPD3YNL330C LYS21Q12122 440 aaKnown RBP7.82□□□□□ -1.16
RPD3YNL330C YLR108CQ12259 485 aa7.82□□□□□ -1.16
RPD3YNL330C TDH2P00358 332 aaKnown RBP7.81□□□□□ -1.16
RPD3YNL330C PRB1P09232 635 aa7.81□□□□□ -1.16
RPD3YNL330C MRP2P10663 115 aaPredicted RBP7.81□□□□□ -1.16
RPD3YNL330C CDC34P14682 295 aa7.81□□□□□ -1.16
RPD3YNL330C SUA5P32579 426 aa7.81□□□□□ -1.16
RPD3YNL330C SLC1P33333 303 aa7.81□□□□□ -1.16
RPD3YNL330C MSN4P33749 630 aa7.81□□□□□ -1.16
RPD3YNL330C OCA5P38738 679 aa7.81□□□□□ -1.16
RPD3YNL330C ARO9P38840 513 aaPredicted RBP7.81□□□□□ -1.16
RPD3YNL330C GLR1P41921 483 aaKnown RBP7.81□□□□□ -1.16
RPD3YNL330C TAD2P47058 250 aa7.81□□□□□ -1.16
RPD3YNL330C YGR042WP53227 271 aa7.81□□□□□ -1.16
RPD3YNL330C FMP48P53233 369 aa7.81□□□□□ -1.16
RPD3YNL330C MTM1P53320 366 aa7.81□□□□□ -1.16
RPD3YNL330C LAP3Q01532 483 aaKnown RBP RIP-Chip data7.81□□□□□ -1.16not detected
RPD3YNL330C ANT1Q06497 328 aa7.81□□□□□ -1.16
RPD3YNL330C GIC2Q06648 383 aa7.81□□□□□ -1.16
RPD3YNL330C YDR262WQ12331 272 aa7.81□□□□□ -1.16
RPD3YNL330C NPC2Q12408 173 aa7.81□□□□□ -1.16
RPD3YNL330C PHO2P07269 559 aa7.8□□□□□ -1.16
RPD3YNL330C CHO1P08456 276 aa7.8□□□□□ -1.16
RPD3YNL330C SAC7P17121 654 aa7.8□□□□□ -1.16
RPD3YNL330C RNQ1P25367 405 aa7.8□□□□□ -1.16
RPD3YNL330C MRP20P32387 263 aa7.8□□□□□ -1.16
RPD3YNL330C NAB2P32505 525 aaKnown RBP RIP-Chip data7.8□□□□□ -1.16not detected
RPD3YNL330C ECM25P32525 599 aa7.8□□□□□ -1.16
RPD3YNL330C SPT10P35208 640 aa7.8□□□□□ -1.16
RPD3YNL330C NSG1P38837 291 aa7.8□□□□□ -1.16
RPD3YNL330C BAT1P38891 393 aaKnown RBP7.8□□□□□ -1.16
RPD3YNL330C TIF34P40217 347 aaKnown RBP7.8□□□□□ -1.16
RPD3YNL330C RRD1P40454 393 aaKnown RBP7.8□□□□□ -1.16
RPD3YNL330C UTP25P40498 721 aaKnown RBP7.8□□□□□ -1.16
RPD3YNL330C INN1P53901 409 aa7.8□□□□□ -1.16
RPD3YNL330C CTF19Q02732 369 aa7.8□□□□□ -1.16
RPD3YNL330C NCE101Q02820 53 aa7.8□□□□□ -1.16
RPD3YNL330C COQ10Q08058 207 aa7.8□□□□□ -1.16
RPD3YNL330C SET6Q12529 373 aa7.8□□□□□ -1.16
RPD3YNL330C VPS13Q07878 3144 aa7.8□□□□□ -1.16
RPD3YNL330C RPL20AP0CX23 172 aaKnown RBP7.79□□□□□ -1.16
RPD3YNL330C RPL20BP0CX24 172 aaPredicted RBP7.79□□□□□ -1.16
RPD3YNL330C MATALPHA1P0CY06 175 aa7.79□□□□□ -1.16
RPD3YNL330C HMLALPHA1P0CY07 175 aa7.79□□□□□ -1.16
RPD3YNL330C GAS1P22146 559 aaKnown RBP7.79□□□□□ -1.16
RPD3YNL330C GPI12P23797 304 aa7.79□□□□□ -1.16
RPD3YNL330C DCG1P32460 244 aa7.79□□□□□ -1.16
RPD3YNL330C SRB6P32570 121 aa7.79□□□□□ -1.16
RPD3YNL330C ECM31P38122 312 aa7.79□□□□□ -1.16
RPD3YNL330C VPS52P39904 641 aa7.79□□□□□ -1.16
RPD3YNL330C PAC1P39946 494 aaKnown RBP7.79□□□□□ -1.16
RPD3YNL330C MPP6P53725 186 aaPredicted RBP7.79□□□□□ -1.16
RPD3YNL330C NRK1P53915 240 aa7.79□□□□□ -1.16
RPD3YNL330C NAM8Q00539 523 aaKnown RBP7.79□□□□□ -1.16
RPD3YNL330C AVO1Q08236 1176 aa7.79□□□□□ -1.16
RPD3YNL330C HRT1Q08273 121 aa7.79□□□□□ -1.16
RPD3YNL330C STE50P25344 346 aa7.78□□□□□ -1.16
RPD3YNL330C HOG1P32485 435 aa7.78□□□□□ -1.16
RPD3YNL330C MRT4P33201 236 aaKnown RBP7.78□□□□□ -1.16
RPD3YNL330C PAD1P33751 242 aaKnown RBP RIP-Chip data7.78□□□□□ -1.16not detected
RPD3YNL330C SRY1P36007 326 aa7.78□□□□□ -1.16
RPD3YNL330C MTC4P38335 694 aaKnown RBP7.78□□□□□ -1.16
RPD3YNL330C PFS1P38872 237 aa7.78□□□□□ -1.16
RPD3YNL330C SSO2P39926 295 aa7.78□□□□□ -1.16
RPD3YNL330C YIL060WP40519 144 aa7.78□□□□□ -1.16
RPD3YNL330C YGR012WP53206 393 aa7.78□□□□□ -1.16
RPD3YNL330C CAF40P53829 373 aa7.78□□□□□ -1.16
RPD3YNL330C ERG13P54839 491 aaKnown RBP7.78□□□□□ -1.16
RPD3YNL330C MRPL1Q04599 285 aa7.78□□□□□ -1.16
RPD3YNL330C SPR28Q04921 423 aa7.78□□□□□ -1.16
RPD3YNL330C MRX8Q05473 314 aa7.78□□□□□ -1.16
RPD3YNL330C YPR174CQ06616 221 aaPredicted RBP7.78□□□□□ -1.16
RPD3YNL330C YFT2Q06676 274 aa7.78□□□□□ -1.16
RPD3YNL330C THI73Q07904 523 aa7.78□□□□□ -1.16
RPD3YNL330C RDR1Q08904 546 aa7.78□□□□□ -1.16
RPD3YNL330C TFB5Q3E7C1 72 aaPredicted RBP7.78□□□□□ -1.16
Retrieved 100 of 5,963 RNA–protein pairs in 29.1 ms