RNA–Protein interactions for RNA: YNL223W

ATG4, Transcript of Conserved cysteine protease required for autophagy, yeastyeast

Gene ATG4, Length 1,485 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG4YNL223W SWM1Q12379 170 aa5.32□□□□□ -1.56
ATG4YNL223W HFA1P32874 2273 aa5.31□□□□□ -1.56
ATG4YNL223W GCN4P03069 281 aa5.31□□□□□ -1.56
ATG4YNL223W RPS13P05756 151 aaKnown RBP5.31□□□□□ -1.56
ATG4YNL223W PHO4P07270 312 aaKnown RBP5.31□□□□□ -1.56
ATG4YNL223W RIP1P08067 215 aa5.31□□□□□ -1.56
ATG4YNL223W STE50P25344 346 aa5.31□□□□□ -1.56
ATG4YNL223W RCN1P36054 211 aa5.31□□□□□ -1.56
ATG4YNL223W GRE3P38715 327 aaKnown RBP RIP-Chip data5.31□□□□□ -1.56not detected
ATG4YNL223W YER010CP40011 234 aa5.31□□□□□ -1.56
ATG4YNL223W YKE4P40544 346 aa5.31□□□□□ -1.56
ATG4YNL223W RPE1P46969 238 aa5.31□□□□□ -1.56
ATG4YNL223W CCC1P47818 322 aa5.31□□□□□ -1.56
ATG4YNL223W DOC1P53068 250 aa5.31□□□□□ -1.56
ATG4YNL223W YGR126WP53274 230 aa5.31□□□□□ -1.56
ATG4YNL223W APM1Q00776 475 aaPredicted RBP5.31□□□□□ -1.56
ATG4YNL223W SSY1Q03770 852 aa5.31□□□□□ -1.56
ATG4YNL223W GIS1Q03833 894 aa5.31□□□□□ -1.56
ATG4YNL223W BNA7Q04066 261 aa5.31□□□□□ -1.56
ATG4YNL223W NMA1Q06178 401 aaKnown RBP5.31□□□□□ -1.56
ATG4YNL223W PHO92Q06390 306 aa5.31□□□□□ -1.56
ATG4YNL223W YPR147CQ06522 304 aaKnown RBP5.31□□□□□ -1.56
ATG4YNL223W RDL2Q08742 149 aaKnown RBP5.31□□□□□ -1.56
ATG4YNL223W YOR283WQ12040 230 aaKnown RBP5.31□□□□□ -1.56
ATG4YNL223W YOR032W-AQ8TGS1 66 aa5.31□□□□□ -1.56
ATG4YNL223W CYC1P00044 109 aaPredicted RBP5.3□□□□□ -1.56
ATG4YNL223W SOD2P00447 233 aa5.3□□□□□ -1.56
ATG4YNL223W ADK1P07170 222 aaKnown RBP5.3□□□□□ -1.56
ATG4YNL223W ACH1P32316 526 aa5.3□□□□□ -1.56
ATG4YNL223W SFK1P35735 353 aa5.3□□□□□ -1.56
ATG4YNL223W MSS4P38994 779 aa5.3□□□□□ -1.56
ATG4YNL223W SLS1P42900 643 aa5.3□□□□□ -1.56
ATG4YNL223W YJR120WP47157 116 aa5.3□□□□□ -1.56
ATG4YNL223W YGL204CP53089 101 aa5.3□□□□□ -1.56
ATG4YNL223W NUP53Q03790 475 aa5.3□□□□□ -1.56
ATG4YNL223W MRX8Q05473 314 aa5.3□□□□□ -1.56
ATG4YNL223W TSR2Q06672 205 aaKnown RBP5.3□□□□□ -1.56
ATG4YNL223W SSK1Q07084 712 aa5.3□□□□□ -1.56
ATG4YNL223W MIM1Q08176 113 aa5.3□□□□□ -1.56
ATG4YNL223W RAX1Q08760 435 aa5.3□□□□□ -1.56
ATG4YNL223W TOR2P32600 2474 aaKnown RBP5.29□□□□□ -1.56
ATG4YNL223W YAL064W-BO13512 126 aa5.29□□□□□ -1.56
ATG4YNL223W RPP2BP02400 110 aaKnown RBP5.29□□□□□ -1.56
ATG4YNL223W RPL40AP0CH08 128 aaKnown RBP5.29□□□□□ -1.56
ATG4YNL223W RPL40BP0CH09 128 aaKnown RBP5.29□□□□□ -1.56
ATG4YNL223W YHR214C-DP0CX93 97 aa5.29□□□□□ -1.56
ATG4YNL223W GCN3P14741 305 aa5.29□□□□□ -1.56
ATG4YNL223W CTA1P15202 515 aa5.29□□□□□ -1.56
ATG4YNL223W DBF2P22204 572 aa5.29□□□□□ -1.56
ATG4YNL223W ERG4P25340 473 aa5.29□□□□□ -1.56
ATG4YNL223W PRE4P30657 266 aa5.29□□□□□ -1.56
ATG4YNL223W THI4P32318 326 aa5.29□□□□□ -1.56
ATG4YNL223W ERG24P32462 438 aaKnown RBP5.29□□□□□ -1.56
ATG4YNL223W PDR3P33200 976 aa5.29□□□□□ -1.56
ATG4YNL223W MRT4P33201 236 aaKnown RBP5.29□□□□□ -1.56
ATG4YNL223W SRP102P36057 244 aaPredicted RBP5.29□□□□□ -1.56
ATG4YNL223W SDS24P38314 527 aa5.29□□□□□ -1.56
ATG4YNL223W HPA3P39979 161 aa5.29□□□□□ -1.56
ATG4YNL223W BNA6P43619 295 aa5.29□□□□□ -1.56
ATG4YNL223W LYS20P48570 428 aaKnown RBP5.29□□□□□ -1.56
ATG4YNL223W LSM7P53905 115 aaKnown RBP5.29□□□□□ -1.56
ATG4YNL223W YPL039WQ03080 316 aa5.29□□□□□ -1.56
ATG4YNL223W VBA4Q04602 768 aaKnown RBP5.29□□□□□ -1.56
ATG4YNL223W LUC7Q07508 261 aaPredicted RBP5.29□□□□□ -1.56
ATG4YNL223W GRE1Q08969 168 aa5.29□□□□□ -1.56
ATG4YNL223W LYS21Q12122 440 aaKnown RBP5.29□□□□□ -1.56
ATG4YNL223W TY1A-BLQ12266 440 aa5.29□□□□□ -1.56
ATG4YNL223W HMS1Q12398 434 aa5.29□□□□□ -1.56
ATG4YNL223W PET54P10834 293 aa5.28□□□□□ -1.56
ATG4YNL223W STE18P18852 110 aa5.28□□□□□ -1.56
ATG4YNL223W ERG8P24521 451 aa5.28□□□□□ -1.56
ATG4YNL223W YCR102CP25608 368 aa5.28□□□□□ -1.56
ATG4YNL223W ATS1P31386 333 aa5.28□□□□□ -1.56
ATG4YNL223W MCM10P32354 571 aa5.28□□□□□ -1.56
ATG4YNL223W RPC34P32910 317 aa5.28□□□□□ -1.56
ATG4YNL223W COS9P36034 407 aa5.28□□□□□ -1.56
ATG4YNL223W HTD2P38790 280 aaKnown RBP5.28□□□□□ -1.56
ATG4YNL223W SHO1P40073 367 aa5.28□□□□□ -1.56
ATG4YNL223W RFC4P40339 323 aaKnown RBP5.28□□□□□ -1.56
ATG4YNL223W REE1P40893 198 aa5.28□□□□□ -1.56
ATG4YNL223W NIT2P47016 307 aa5.28□□□□□ -1.56
ATG4YNL223W DPB11P47027 764 aaPredicted RBP5.28□□□□□ -1.56
ATG4YNL223W ASI3P53983 676 aa5.28□□□□□ -1.56
ATG4YNL223W PET191Q02772 108 aa5.28□□□□□ -1.56
ATG4YNL223W YDR209CQ03480 137 aa5.28□□□□□ -1.56
ATG4YNL223W MIX14Q04341 121 aa5.28□□□□□ -1.56
ATG4YNL223W ASR1Q06834 288 aa5.28□□□□□ -1.56
ATG4YNL223W NIP7Q08962 181 aaKnown RBP5.28□□□□□ -1.56
ATG4YNL223W BRR2P32639 2163 aaKnown RBP5.28□□□□□ -1.56
ATG4YNL223W GPM1P00950 247 aaKnown RBP5.27□□□□□ -1.57
ATG4YNL223W PDA1P16387 420 aaKnown RBP5.27□□□□□ -1.57
ATG4YNL223W PUP1P25043 261 aa5.27□□□□□ -1.57
ATG4YNL223W LDB16P25587 256 aa5.27□□□□□ -1.57
ATG4YNL223W CPR3P25719 182 aa5.27□□□□□ -1.57
ATG4YNL223W NAM9P27929 486 aa5.27□□□□□ -1.57
ATG4YNL223W CAM1P29547 415 aaKnown RBP5.27□□□□□ -1.57
ATG4YNL223W ERG9P29704 444 aa5.27□□□□□ -1.57
ATG4YNL223W HYM1P32464 399 aa5.27□□□□□ -1.57
ATG4YNL223W KRE6P32486 720 aa5.27□□□□□ -1.57
ATG4YNL223W SPT10P35208 640 aa5.27□□□□□ -1.57
Retrieved 100 of 5,963 RNA–protein pairs in 16.2 ms