RNA–Protein interactions for RNA: YNL132W

KRE33, Transcript of Protein required for biogenesis of the small ribosomal subunit, yeast

Gene KRE33, Length 3,171 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
KRE33	YNL132W	NRK1	P53915	240 aa		2.21	□□□□□ -2.06
KRE33	YNL132W	MAK3	Q03503	176 aa		2.21	□□□□□ -2.06
KRE33	YNL132W	TDA1	Q03533	586 aa		2.21	□□□□□ -2.06
KRE33	YNL132W	SDH7	Q04401	133 aa		2.21	□□□□□ -2.06
KRE33	YNL132W	BNA5	Q05979	453 aa		2.21	□□□□□ -2.06
KRE33	YNL132W	HEM25	Q07534	307 aa		2.21	□□□□□ -2.06
KRE33	YNL132W	IMA2	Q08295	589 aa		2.21	□□□□□ -2.06
KRE33	YNL132W	PSF1	Q12488	208 aa		2.21	□□□□□ -2.06
KRE33	YNL132W	MRP10	O75012	95 aa		2.2	□□□□□ -2.06
KRE33	YNL132W	COR1	P07256	457 aa		2.2	□□□□□ -2.06
KRE33	YNL132W	RPL20A	P0CX23	172 aa	Known RBP	2.2	□□□□□ -2.06
KRE33	YNL132W	RPL20B	P0CX24	172 aa	Predicted RBP	2.2	□□□□□ -2.06
KRE33	YNL132W	EPT1	P22140	391 aa		2.2	□□□□□ -2.06
KRE33	YNL132W	TKL1	P23254	680 aa	Known RBP	2.2	□□□□□ -2.06
KRE33	YNL132W	MBR1	P23493	339 aa		2.2	□□□□□ -2.06
KRE33	YNL132W	ELO2	P25358	347 aa		2.2	□□□□□ -2.06
KRE33	YNL132W	SPS18	P32572	300 aa		2.2	□□□□□ -2.06
KRE33	YNL132W	SOR1	P35497	357 aa	Known RBP	2.2	□□□□□ -2.06
KRE33	YNL132W	JEN1	P36035	616 aa		2.2	□□□□□ -2.06
KRE33	YNL132W	FRM2	P37261	193 aa		2.2	□□□□□ -2.06
KRE33	YNL132W	BNA4	P38169	460 aa		2.2	□□□□□ -2.06
KRE33	YNL132W	ISC1	P40015	477 aa	Known RBP	2.2	□□□□□ -2.06
KRE33	YNL132W	YER076C	P40049	302 aa		2.2	□□□□□ -2.06
KRE33	YNL132W	YER079W	P40052	210 aa	Known RBP	2.2	□□□□□ -2.06
KRE33	YNL132W	COG3	P40094	801 aa		2.2	□□□□□ -2.06
KRE33	YNL132W	ATG27	P46989	271 aa		2.2	□□□□□ -2.06
KRE33	YNL132W	GPI14	P47088	403 aa	Known RBP	2.2	□□□□□ -2.06
KRE33	YNL132W	ILM1	P47155	203 aa		2.2	□□□□□ -2.06
KRE33	YNL132W	SCS3	P53012	380 aa		2.2	□□□□□ -2.06
KRE33	YNL132W	BOR1	P53838	576 aa		2.2	□□□□□ -2.06
KRE33	YNL132W	KTR5	P53966	522 aa	Predicted RBP	2.2	□□□□□ -2.06
KRE33	YNL132W	SAE3	P89114	91 aa		2.2	□□□□□ -2.06
KRE33	YNL132W	SEC13	Q04491	297 aa	Known RBP	2.2	□□□□□ -2.06
KRE33	YNL132W	PRM6	Q04705	352 aa		2.2	□□□□□ -2.06
KRE33	YNL132W	MHR1	Q06630	226 aa		2.2	□□□□□ -2.06
KRE33	YNL132W	SOR2	Q07786	357 aa		2.2	□□□□□ -2.06
KRE33	YNL132W	TEN1	Q07921	160 aa		2.2	□□□□□ -2.06
KRE33	YNL132W	ICT1	Q12385	394 aa		2.2	□□□□□ -2.06
KRE33	YNL132W	DCN1	Q12395	269 aa		2.2	□□□□□ -2.06
KRE33	YNL132W	YDL199C	Q12407	687 aa		2.2	□□□□□ -2.06
KRE33	YNL132W	IPP1	P00817	287 aa	Known RBP	2.2	□□□□□ -2.06
KRE33	YNL132W	ILV1	P00927	576 aa	Known RBP	2.2	□□□□□ -2.06
KRE33	YNL132W	ADE4	P04046	510 aa	Known RBP	2.2	□□□□□ -2.06
KRE33	YNL132W	CNB1	P25296	175 aa		2.2	□□□□□ -2.06
KRE33	YNL132W	DCG1	P32460	244 aa		2.2	□□□□□ -2.06
KRE33	YNL132W	NUP2	P32499	720 aa		2.2	□□□□□ -2.06
KRE33	YNL132W	YSC84	P32793	468 aa		2.2	□□□□□ -2.06
KRE33	YNL132W	TRM7	P38238	310 aa	Known RBP	2.2	□□□□□ -2.06
KRE33	YNL132W	DDI1	P40087	428 aa		2.2	□□□□□ -2.06
KRE33	YNL132W	GAT2	P40209	560 aa		2.2	□□□□□ -2.06
KRE33	YNL132W	PRE6	P40303	254 aa	Known RBP	2.2	□□□□□ -2.06
KRE33	YNL132W	RPL10	P41805	221 aa	Known RBP	2.2	□□□□□ -2.06
KRE33	YNL132W	PFA3	P42836	336 aa		2.2	□□□□□ -2.06
KRE33	YNL132W	LYS20	P48570	428 aa	Known RBP	2.2	□□□□□ -2.06
KRE33	YNL132W	YGR017W	P53210	297 aa		2.2	□□□□□ -2.06
KRE33	YNL132W	SOK2	P53438	785 aa	Predicted RBP	2.2	□□□□□ -2.06
KRE33	YNL132W	UBC7	Q02159	165 aa		2.2	□□□□□ -2.06
KRE33	YNL132W	YPL068C	Q02749	293 aa		2.2	□□□□□ -2.06
KRE33	YNL132W	PFA5	Q03289	374 aa		2.2	□□□□□ -2.06
KRE33	YNL132W	YMR034C	Q05131	434 aa	Predicted RBP	2.2	□□□□□ -2.06
KRE33	YNL132W	INM2	Q05533	292 aa		2.2	□□□□□ -2.06
KRE33	YNL132W	ASR1	Q06834	288 aa		2.2	□□□□□ -2.06
KRE33	YNL132W	PRP11	Q07350	266 aa	Predicted RBP	2.2	□□□□□ -2.06
KRE33	YNL132W	MLH3	Q12083	715 aa		2.2	□□□□□ -2.06
KRE33	YNL132W	RIB3	Q99258	208 aa		2.2	□□□□□ -2.06
KRE33	YNL132W	DUR1,2	P32528	1835 aa	Known RBP	2.2	□□□□□ -2.06
KRE33	YNL132W	YOR304C-A	O14468	76 aa		2.2	□□□□□ -2.06
KRE33	YNL132W	CBP6	P07253	162 aa	Predicted RBP	2.2	□□□□□ -2.06
KRE33	YNL132W	RIP1	P08067	215 aa		2.2	□□□□□ -2.06
KRE33	YNL132W	DDI2	P0CH63	225 aa		2.2	□□□□□ -2.06
KRE33	YNL132W	DDI3	P0CH64	225 aa		2.2	□□□□□ -2.06
KRE33	YNL132W	YPK1	P12688	680 aa	Known RBP	2.2	□□□□□ -2.06
KRE33	YNL132W	MXR2	P25566	168 aa		2.2	□□□□□ -2.06
KRE33	YNL132W	ATO2	P32907	282 aa		2.2	□□□□□ -2.06
KRE33	YNL132W	TRM2	P33753	639 aa		2.2	□□□□□ -2.06
KRE33	YNL132W	SPC34	P36131	295 aa		2.2	□□□□□ -2.06
KRE33	YNL132W	TVP38	P36164	337 aa		2.2	□□□□□ -2.06
KRE33	YNL132W	RPL32	P38061	130 aa	Known RBP	2.2	□□□□□ -2.06
KRE33	YNL132W	MRX3	P38172	270 aa		2.2	□□□□□ -2.06
KRE33	YNL132W	UBC11	P52492	156 aa		2.2	□□□□□ -2.06
KRE33	YNL132W	VPS73	P53142	486 aa	Known RBP	2.2	□□□□□ -2.06
KRE33	YNL132W	YGR035C	P53222	116 aa		2.2	□□□□□ -2.06
KRE33	YNL132W	CPD1	P53314	239 aa		2.2	□□□□□ -2.06
KRE33	YNL132W	MPA43	P53583	542 aa	Predicted RBP	2.2	□□□□□ -2.06
KRE33	YNL132W	YMR178W	Q03219	274 aa	Known RBP	2.2	□□□□□ -2.06
KRE33	YNL132W	YDR124W	Q04608	324 aa		2.2	□□□□□ -2.06
KRE33	YNL132W	TAF10	Q12030	206 aa		2.2	□□□□□ -2.06
KRE33	YNL132W	YOR214C	Q12282	236 aa		2.2	□□□□□ -2.06
KRE33	YNL132W	RIB2	Q12362	591 aa	Known RBP	2.2	□□□□□ -2.06
KRE33	YNL132W	NCA2	Q12374	616 aa		2.2	□□□□□ -2.06
KRE33	YNL132W	TRM13	Q12383	476 aa		2.2	□□□□□ -2.06
KRE33	YNL132W	GEP5	Q12393	293 aa		2.2	□□□□□ -2.06
KRE33	YNL132W	MRX4	Q12467	430 aa		2.2	□□□□□ -2.06
KRE33	YNL132W	YER175W-A	Q8TGU4	54 aa		2.2	□□□□□ -2.06
KRE33	YNL132W	PDR18	P53756	1333 aa		2.19	□□□□□ -2.06
KRE33	YNL132W	TPK3	P05986	398 aa		2.19	□□□□□ -2.06
KRE33	YNL132W	ADE5,7	P07244	802 aa	Known RBP	2.19	□□□□□ -2.06
KRE33	YNL132W	ERD1	P16151	362 aa		2.19	□□□□□ -2.06
KRE33	YNL132W	MCK1	P21965	375 aa	Known RBP	2.19	□□□□□ -2.06
KRE33	YNL132W	RPS1B	P23248	255 aa	Known RBP	2.19	□□□□□ -2.06

Retrieved 100 of 5,963 RNA–protein pairs in 64.9 ms