RNA–Protein interactions for RNA: YNL025C

SSN8, Transcript of Cyclin-like component of the RNA polymerase II holoenzyme, yeast

Gene SSN8, Length 972 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SSN8	YNL025C	INM2	Q05533	292 aa		2.75	□□□□□ -1.97
SSN8	YNL025C	SFH1	Q06168	426 aa		2.75	□□□□□ -1.97
SSN8	YNL025C	DXO1	Q06349	442 aa		2.75	□□□□□ -1.97
SSN8	YNL025C	BSP1	Q06604	576 aa		2.75	□□□□□ -1.97
SSN8	YNL025C	MCH4	Q08268	501 aa		2.75	□□□□□ -1.97
SSN8	YNL025C	SRL2	Q12020	392 aa		2.75	□□□□□ -1.97
SSN8	YNL025C	ORT1	Q12375	292 aa		2.75	□□□□□ -1.97
SSN8	YNL025C	YPR064W	Q12492	139 aa		2.75	□□□□□ -1.97
SSN8	YNL025C	TAF2	P23255	1407 aa		2.75	□□□□□ -1.97
SSN8	YNL025C	SSN2	P38931	1420 aa		2.75	□□□□□ -1.97
SSN8	YNL025C	POM152	P39685	1337 aa		2.74	□□□□□ -1.97
SSN8	YNL025C	TPI1	P00942	248 aa	Known RBP	2.74	□□□□□ -1.97
SSN8	YNL025C	AQY1	P0CD91	305 aa		2.74	□□□□□ -1.97
SSN8	YNL025C	RPL20A	P0CX23	172 aa	Known RBP	2.74	□□□□□ -1.97
SSN8	YNL025C	RPL20B	P0CX24	172 aa	Predicted RBP	2.74	□□□□□ -1.97
SSN8	YNL025C	CTA1	P15202	515 aa		2.74	□□□□□ -1.97
SSN8	YNL025C	SEC22	P22214	214 aa		2.74	□□□□□ -1.97
SSN8	YNL025C	AIM17	P23180	465 aa	Known RBP	2.74	□□□□□ -1.97
SSN8	YNL025C	EXG1	P23776	448 aa	Known RBP	2.74	□□□□□ -1.97
SSN8	YNL025C	POF1	P25576	258 aa		2.74	□□□□□ -1.97
SSN8	YNL025C	CAM1	P29547	415 aa	Known RBP	2.74	□□□□□ -1.97
SSN8	YNL025C	SEC1	P30619	724 aa	Known RBP	2.74	□□□□□ -1.97
SSN8	YNL025C	KAR9	P32526	644 aa		2.74	□□□□□ -1.97
SSN8	YNL025C	YEF1	P32622	495 aa		2.74	□□□□□ -1.97
SSN8	YNL025C	SPC34	P36131	295 aa		2.74	□□□□□ -1.97
SSN8	YNL025C	SDS24	P38314	527 aa		2.74	□□□□□ -1.97
SSN8	YNL025C	GRE3	P38715	327 aa	Known RBP RIP-Chip data	2.74	□□□□□ -1.97	not detected
SSN8	YNL025C	YHK8	P38776	514 aa		2.74	□□□□□ -1.97
SSN8	YNL025C	YPT35	P38815	214 aa	Known RBP	2.74	□□□□□ -1.97
SSN8	YNL025C	KRE29	P40026	464 aa		2.74	□□□□□ -1.97
SSN8	YNL025C	YIL060W	P40519	144 aa		2.74	□□□□□ -1.97
SSN8	YNL025C	DFG10	P40526	253 aa		2.74	□□□□□ -1.97
SSN8	YNL025C	YNL320W	P42840	284 aa		2.74	□□□□□ -1.97
SSN8	YNL025C	TDA10	P42938	290 aa		2.74	□□□□□ -1.97
SSN8	YNL025C	COS4	P43542	379 aa		2.74	□□□□□ -1.97
SSN8	YNL025C	YFL015C	P43578	164 aa		2.74	□□□□□ -1.97
SSN8	YNL025C	MDV1	P47025	714 aa		2.74	□□□□□ -1.97
SSN8	YNL025C	JHD2	P47156	728 aa	Predicted RBP	2.74	□□□□□ -1.97
SSN8	YNL025C	YGL082W	P53155	381 aa		2.74	□□□□□ -1.97
SSN8	YNL025C	JAC1	P53193	184 aa		2.74	□□□□□ -1.97
SSN8	YNL025C	SOL4	P53315	255 aa		2.74	□□□□□ -1.97
SSN8	YNL025C	MAL13	P53338	473 aa		2.74	□□□□□ -1.97
SSN8	YNL025C	YNR048W	P53740	393 aa		2.74	□□□□□ -1.97
SSN8	YNL025C	YPL014W	Q02606	381 aa		2.74	□□□□□ -1.97
SSN8	YNL025C	TRM44	Q02648	567 aa	Known RBP	2.74	□□□□□ -1.97
SSN8	YNL025C	RSC9	Q03124	581 aa		2.74	□□□□□ -1.97
SSN8	YNL025C	TDA1	Q03533	586 aa		2.74	□□□□□ -1.97
SSN8	YNL025C	YMR010W	Q03687	405 aa		2.74	□□□□□ -1.97
SSN8	YNL025C	YPR098C	Q06089	161 aa		2.74	□□□□□ -1.97
SSN8	YNL025C	YPR127W	Q06494	345 aa		2.74	□□□□□ -1.97
SSN8	YNL025C	NOC4	Q06512	552 aa	Predicted RBP	2.74	□□□□□ -1.97
SSN8	YNL025C	YLR012C	Q07927	99 aa		2.74	□□□□□ -1.97
SSN8	YNL025C	YLR036C	Q07986	203 aa		2.74	□□□□□ -1.97
SSN8	YNL025C	FCY22	Q12119	530 aa		2.74	□□□□□ -1.97
SSN8	YNL025C	ERV2	Q12284	196 aa		2.74	□□□□□ -1.97
SSN8	YNL025C	RDL1	Q12305	139 aa	Known RBP	2.74	□□□□□ -1.97
SSN8	YNL025C	RDI1	Q12434	202 aa		2.74	□□□□□ -1.97
SSN8	YNL025C	YDL085C-A	Q3E7B7	68 aa	Known RBP	2.74	□□□□□ -1.97
SSN8	YNL025C	ERD1	P16151	362 aa		2.73	□□□□□ -1.97
SSN8	YNL025C	CPT1	P17898	393 aa		2.73	□□□□□ -1.97
SSN8	YNL025C	IFM1	P25038	676 aa		2.73	□□□□□ -1.97
SSN8	YNL025C	PMT2	P31382	759 aa		2.73	□□□□□ -1.97
SSN8	YNL025C	MDH3	P32419	343 aa	Known RBP RIP-Chip data	2.73	□□□□□ -1.97	not detected
SSN8	YNL025C	NTF2	P33331	125 aa	Known RBP	2.73	□□□□□ -1.97
SSN8	YNL025C	TIR2	P33890	251 aa		2.73	□□□□□ -1.97
SSN8	YNL025C	MRPL28	P36527	147 aa		2.73	□□□□□ -1.97
SSN8	YNL025C	YBP1	P38315	674 aa		2.73	□□□□□ -1.97
SSN8	YNL025C	ARC40	P38328	384 aa	Known RBP	2.73	□□□□□ -1.97
SSN8	YNL025C	YIL169C	P40442	995 aa		2.73	□□□□□ -1.97
SSN8	YNL025C	CSM2	P40465	213 aa		2.73	□□□□□ -1.97
SSN8	YNL025C	CDC1	P40986	491 aa		2.73	□□□□□ -1.97
SSN8	YNL025C	AZF1	P41696	914 aa		2.73	□□□□□ -1.97
SSN8	YNL025C	YCH1	P42937	148 aa		2.73	□□□□□ -1.97
SSN8	YNL025C	ALB1	P47019	175 aa	Predicted RBP	2.73	□□□□□ -1.97
SSN8	YNL025C	CPR7	P47103	393 aa		2.73	□□□□□ -1.97
SSN8	YNL025C	PHB2	P50085	310 aa		2.73	□□□□□ -1.97
SSN8	YNL025C	ALG13	P53178	202 aa		2.73	□□□□□ -1.97
SSN8	YNL025C	YGL039W	P53183	348 aa	Known RBP	2.73	□□□□□ -1.97
SSN8	YNL025C	SCW4	P53334	386 aa	Known RBP	2.73	□□□□□ -1.97
SSN8	YNL025C	GOR1	P53839	350 aa		2.73	□□□□□ -1.97
SSN8	YNL025C	PDR17	P53844	350 aa		2.73	□□□□□ -1.97
SSN8	YNL025C	COG5	P53951	403 aa		2.73	□□□□□ -1.97
SSN8	YNL025C	YLR152C	P54072	576 aa		2.73	□□□□□ -1.97
SSN8	YNL025C	ASI1	P54074	624 aa		2.73	□□□□□ -1.97
SSN8	YNL025C	YMR279C	Q03263	540 aa		2.73	□□□□□ -1.97
SSN8	YNL025C	PKR1	Q03880	122 aa	Known RBP	2.73	□□□□□ -1.97
SSN8	YNL025C	YET2	Q04210	160 aa		2.73	□□□□□ -1.97
SSN8	YNL025C	YMR027W	Q04371	470 aa		2.73	□□□□□ -1.97
SSN8	YNL025C	TAF9	Q05027	157 aa		2.73	□□□□□ -1.97
SSN8	YNL025C	YMR034C	Q05131	434 aa	Predicted RBP	2.73	□□□□□ -1.97
SSN8	YNL025C	MRPL51	Q06090	140 aa	Predicted RBP	2.73	□□□□□ -1.97
SSN8	YNL025C	YPR091C	Q06833	770 aa		2.73	□□□□□ -1.97
SSN8	YNL025C	DTD1	Q07648	150 aa	Known RBP	2.73	□□□□□ -1.97
SSN8	YNL025C	TPO4	Q12256	659 aa		2.73	□□□□□ -1.97
SSN8	YNL025C	TFC7	Q12415	435 aa		2.73	□□□□□ -1.97
SSN8	YNL025C	ARP6	Q12509	438 aa		2.73	□□□□□ -1.97
SSN8	YNL025C	DET1	Q99288	334 aa	Known RBP	2.73	□□□□□ -1.97
SSN8	YNL025C	RAD50	P12753	1312 aa		2.72	□□□□□ -1.97
SSN8	YNL025C	YER145C-A	A0A023PYF4	145 aa		2.72	□□□□□ -1.97
SSN8	YNL025C	CMD1	P06787	147 aa	Known RBP	2.72	□□□□□ -1.97

Retrieved 100 of 5,963 RNA–protein pairs in 21.4 ms