RNA–Protein interactions for RNA: YKL042W

SPC42, Transcript of Central plaque component of spindle pole body (SPB), yeast

Gene SPC42, Length 1,092 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPC42	YKL042W	DDI1	P40087	428 aa		4.15	□□□□□ -1.75
SPC42	YKL042W	CDC14	Q00684	551 aa		4.15	□□□□□ -1.75
SPC42	YKL042W	TRM44	Q02648	567 aa	Known RBP	4.15	□□□□□ -1.75
SPC42	YKL042W	PET117	Q02771	107 aa		4.15	□□□□□ -1.75
SPC42	YKL042W	SRL4	Q03085	281 aa		4.15	□□□□□ -1.75
SPC42	YKL042W	YML018C	Q03730	393 aa		4.15	□□□□□ -1.75
SPC42	YKL042W	YMR244W	Q04018	355 aa		4.15	□□□□□ -1.75
SPC42	YKL042W	CTR3	Q06686	241 aa		4.15	□□□□□ -1.75
SPC42	YKL042W	PER33	Q12144	273 aa		4.15	□□□□□ -1.75
SPC42	YKL042W	YAL067W-A	Q8TGK6	75 aa		4.15	□□□□□ -1.75
SPC42	YKL042W	PET494	P07390	489 aa	Predicted RBP	4.14	□□□□□ -1.75
SPC42	YKL042W	DAL81	P21657	970 aa		4.14	□□□□□ -1.75
SPC42	YKL042W	RRG9	P40156	214 aa		4.14	□□□□□ -1.75
SPC42	YKL042W	IBA57	P47158	497 aa		4.14	□□□□□ -1.75
SPC42	YKL042W	YGR018C	P53211	109 aa		4.14	□□□□□ -1.75
SPC42	YKL042W	BOP2	Q06150	570 aa		4.14	□□□□□ -1.75
SPC42	YKL042W	YPL278C	Q08990	100 aa		4.14	□□□□□ -1.75
SPC42	YKL042W	TRM10	Q12400	293 aa		4.14	□□□□□ -1.75
SPC42	YKL042W	ADH1	P00330	348 aa	Known RBP	4.13	□□□□□ -1.75
SPC42	YKL042W	RPS3	P05750	240 aa	Known RBP	4.13	□□□□□ -1.75
SPC42	YKL042W	FRM2	P37261	193 aa		4.13	□□□□□ -1.75
SPC42	YKL042W	MBA1	P38300	278 aa		4.13	□□□□□ -1.75
SPC42	YKL042W	SHC1	P39000	512 aa		4.13	□□□□□ -1.75
SPC42	YKL042W	SDO1	Q07953	250 aa	Known RBP	4.13	□□□□□ -1.75
SPC42	YKL042W	YOR029W	Q12243	111 aa		4.13	□□□□□ -1.75
SPC42	YKL042W	ZRT3	P34240	503 aa		4.12	□□□□□ -1.75
SPC42	YKL042W	AIM29	P36154	155 aa		4.12	□□□□□ -1.75
SPC42	YKL042W	PRS4	P38063	326 aa	Predicted RBP	4.12	□□□□□ -1.75
SPC42	YKL042W	ATG12	P38316	186 aa		4.12	□□□□□ -1.75
SPC42	YKL042W	FMC1	P40491	155 aa		4.12	□□□□□ -1.75
SPC42	YKL042W	MIC19	P43594	170 aa		4.12	□□□□□ -1.75
SPC42	YKL042W	COG7	P53195	279 aa		4.12	□□□□□ -1.75
SPC42	YKL042W	MNT4	P53745	580 aa		4.12	□□□□□ -1.75
SPC42	YKL042W	RNY1	Q02933	434 aa	Known RBP	4.12	□□□□□ -1.75
SPC42	YKL042W	VPS60	Q03390	229 aa		4.12	□□□□□ -1.75
SPC42	YKL042W	RUD3	Q12234	484 aa	Known RBP	4.12	□□□□□ -1.75
SPC42	YKL042W	FLO11	P08640	1367 aa		4.12	□□□□□ -1.75
SPC42	YKL042W	TPI1	P00942	248 aa	Known RBP	4.11	□□□□□ -1.75
SPC42	YKL042W	RPP0	P05317	312 aa	Known RBP	4.11	□□□□□ -1.75
SPC42	YKL042W	ARO4	P32449	370 aa	Known RBP	4.11	□□□□□ -1.75
SPC42	YKL042W	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	4.11	□□□□□ -1.75	not detected
SPC42	YKL042W	MRPL3	P36516	390 aa		4.11	□□□□□ -1.75
SPC42	YKL042W	KRE29	P40026	464 aa		4.11	□□□□□ -1.75
SPC42	YKL042W	YFL064C	P43540	174 aa		4.11	□□□□□ -1.75
SPC42	YKL042W	ASG7	P46993	209 aa		4.11	□□□□□ -1.75
SPC42	YKL042W	SEC10	Q06245	871 aa		4.11	□□□□□ -1.75
SPC42	YKL042W	ATG31	Q12421	196 aa		4.11	□□□□□ -1.75
SPC42	YKL042W	YOL085C	Q99345	113 aa		4.11	□□□□□ -1.75
SPC42	YKL042W	CDC42	P19073	191 aa		4.1	□□□□□ -1.75
SPC42	YKL042W	YCR025C	P25352	136 aa		4.1	□□□□□ -1.75
SPC42	YKL042W	IMP1	P28627	190 aa		4.1	□□□□□ -1.75
SPC42	YKL042W	PEX3	P28795	441 aa		4.1	□□□□□ -1.75
SPC42	YKL042W	VPH2	P32341	215 aa		4.1	□□□□□ -1.75
SPC42	YKL042W	PRS1	P32895	427 aa	Known RBP	4.1	□□□□□ -1.75
SPC42	YKL042W	DBP7	P36120	742 aa	Known RBP	4.1	□□□□□ -1.75
SPC42	YKL042W	PRS2	P38620	318 aa	Known RBP	4.1	□□□□□ -1.75
SPC42	YKL042W	DED81	P38707	554 aa	Known RBP	4.1	□□□□□ -1.75
SPC42	YKL042W	YIL054W	P40524	105 aa		4.1	□□□□□ -1.75
SPC42	YKL042W	YIL012W	P40551	113 aa		4.1	□□□□□ -1.75
SPC42	YKL042W	YJR012C	P47087	207 aa		4.1	□□□□□ -1.75
SPC42	YKL042W	PRP24	P49960	444 aa	Known RBP	4.1	□□□□□ -1.75
SPC42	YKL042W	NBP1	P52919	319 aa	Predicted RBP	4.1	□□□□□ -1.75
SPC42	YKL042W	YGL118C	P53132	145 aa		4.1	□□□□□ -1.75
SPC42	YKL042W	TIM21	P53220	239 aa		4.1	□□□□□ -1.75
SPC42	YKL042W	ARC18	Q05933	178 aa	Known RBP	4.1	□□□□□ -1.75
SPC42	YKL042W	TIR4	Q12218	487 aa	Predicted RBP	4.1	□□□□□ -1.75
SPC42	YKL042W	DFM1	Q12743	341 aa	Known RBP	4.1	□□□□□ -1.75
SPC42	YKL042W	YOS9	Q99220	542 aa		4.1	□□□□□ -1.75
SPC42	YKL042W	CFT1	Q06632	1357 aa	Known RBP	4.1	□□□□□ -1.75
SPC42	YKL042W	YAL064W-B	O13512	126 aa		4.09	□□□□□ -1.75
SPC42	YKL042W	YCR016W	P25617	290 aa	Known RBP	4.09	□□□□□ -1.75
SPC42	YKL042W	SEN34	P39707	275 aa		4.09	□□□□□ -1.75
SPC42	YKL042W	AVT7	P40501	490 aa		4.09	□□□□□ -1.75
SPC42	YKL042W	RPL10	P41805	221 aa	Known RBP	4.09	□□□□□ -1.75
SPC42	YKL042W	LIF1	P53150	421 aa		4.09	□□□□□ -1.75
SPC42	YKL042W	MRPL50	P53724	139 aa		4.09	□□□□□ -1.75
SPC42	YKL042W	YDR209C	Q03480	137 aa		4.09	□□□□□ -1.75
SPC42	YKL042W	PAM18	Q07914	168 aa		4.09	□□□□□ -1.75
SPC42	YKL042W	SME1	Q12330	94 aa	Predicted RBP	4.09	□□□□□ -1.75
SPC42	YKL042W	RPS19A	P07280	144 aa	Known RBP	4.08	□□□□□ -1.76
SPC42	YKL042W	RPS19B	P07281	144 aa	Predicted RBP	4.08	□□□□□ -1.76
SPC42	YKL042W	ATG15	P25641	520 aa		4.08	□□□□□ -1.76
SPC42	YKL042W	ZIP1	P31111	875 aa		4.08	□□□□□ -1.76
SPC42	YKL042W	STH1	P32597	1359 aa		4.08	□□□□□ -1.76
SPC42	YKL042W	MSN4	P33749	630 aa		4.08	□□□□□ -1.76
SPC42	YKL042W	MRPS9	P38120	278 aa		4.08	□□□□□ -1.76
SPC42	YKL042W	MRP21	P38175	177 aa		4.08	□□□□□ -1.76
SPC42	YKL042W	SEO1	P39709	593 aa		4.08	□□□□□ -1.76
SPC42	YKL042W	EDC2	P40023	145 aa	Predicted RBP	4.08	□□□□□ -1.76
SPC42	YKL042W	UFE1	P41834	346 aa		4.08	□□□□□ -1.76
SPC42	YKL042W	YPL113C	Q02961	396 aa		4.08	□□□□□ -1.76
SPC42	YKL042W	ECM19	Q06011	112 aa		4.08	□□□□□ -1.76
SPC42	YKL042W	MSH5	Q12175	901 aa		4.08	□□□□□ -1.76
SPC42	YKL042W	YMR316C-A	I2HB70	103 aa		4.07	□□□□□ -1.76
SPC42	YKL042W	TPS2	P31688	896 aa	Known RBP	4.07	□□□□□ -1.76
SPC42	YKL042W	SER33	P40510	469 aa		4.07	□□□□□ -1.76
SPC42	YKL042W	YFL012W	P43580	148 aa		4.07	□□□□□ -1.76
SPC42	YKL042W	MAL13	P53338	473 aa		4.07	□□□□□ -1.76
SPC42	YKL042W	YAL063C-A	Q3E791	96 aa		4.07	□□□□□ -1.76
SPC42	YKL042W	AUS1	Q08409	1394 aa		4.06	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 42.9 ms