RNA–Protein interactions for RNA: YJL053W

PEP8, Transcript of Vacuolar protein component of the retromer, yeastyeast

Gene PEP8, Length 1,140 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEP8YJL053W ECO1P43605 281 aa1.75□□□□□ -2.13
PEP8YJL053W GCD14P46959 383 aaPredicted RBP1.75□□□□□ -2.13
PEP8YJL053W MRX5P47007 382 aa1.75□□□□□ -2.13
PEP8YJL053W YPT32P51996 222 aaKnown RBP1.75□□□□□ -2.13
PEP8YJL053W ACT1P60010 375 aaKnown RBP1.75□□□□□ -2.13
PEP8YJL053W DPP1Q05521 289 aa1.75□□□□□ -2.13
PEP8YJL053W YPL264CQ08980 353 aa1.75□□□□□ -2.13
PEP8YJL053W YAK1P14680 807 aa1.74□□□□□ -2.13
PEP8YJL053W DBP3P20447 523 aaKnown RBP1.74□□□□□ -2.13
PEP8YJL053W OSM1P21375 501 aaKnown RBP1.74□□□□□ -2.13
PEP8YJL053W ARO4P32449 370 aaKnown RBP1.74□□□□□ -2.13
PEP8YJL053W AEP1P32493 518 aa1.74□□□□□ -2.13
PEP8YJL053W RPS0AP32905 252 aaKnown RBP1.74□□□□□ -2.13
PEP8YJL053W YHL044WP38727 235 aa1.74□□□□□ -2.13
PEP8YJL053W RRF1P38771 230 aa1.74□□□□□ -2.13
PEP8YJL053W SPO73P40031 143 aa1.74□□□□□ -2.13
PEP8YJL053W UFD1P53044 361 aa1.74□□□□□ -2.13
PEP8YJL053W YML018CQ03730 393 aa1.74□□□□□ -2.13
PEP8YJL053W YDR222WQ04925 415 aa1.74□□□□□ -2.13
PEP8YJL053W TAF9Q05027 157 aa1.74□□□□□ -2.13
PEP8YJL053W NNT1Q05874 261 aa1.74□□□□□ -2.13
PEP8YJL053W YDL144CQ07589 356 aa1.74□□□□□ -2.13
PEP8YJL053W MRPL23Q12487 163 aaPredicted RBP1.74□□□□□ -2.13
PEP8YJL053W YOL163WP0CF20 169 aa1.73□□□□□ -2.13
PEP8YJL053W PHO80P20052 293 aa1.73□□□□□ -2.13
PEP8YJL053W SPT4P32914 102 aaPredicted RBP1.73□□□□□ -2.13
PEP8YJL053W TKL2P33315 681 aa1.73□□□□□ -2.13
PEP8YJL053W YBR062CP38239 180 aa1.73□□□□□ -2.13
PEP8YJL053W SEN34P39707 275 aa1.73□□□□□ -2.13
PEP8YJL053W SHQ1P40486 507 aaPredicted RBP1.73□□□□□ -2.13
PEP8YJL053W YFR045WP43617 309 aa1.73□□□□□ -2.13
PEP8YJL053W HSH155P49955 971 aaKnown RBP1.73□□□□□ -2.13
PEP8YJL053W RPN14P53196 417 aa1.73□□□□□ -2.13
PEP8YJL053W ERV25P54837 211 aaKnown RBP1.73□□□□□ -2.13
PEP8YJL053W ECM18Q04623 453 aa1.73□□□□□ -2.13
PEP8YJL053W TAZ1Q06510 381 aa1.73□□□□□ -2.13
PEP8YJL053W YLL007CQ07799 665 aa1.73□□□□□ -2.13
PEP8YJL053W RLP24Q07915 199 aaKnown RBP1.73□□□□□ -2.13
PEP8YJL053W RFM1Q12192 310 aa1.73□□□□□ -2.13
PEP8YJL053W MRX4Q12467 430 aa1.73□□□□□ -2.13
PEP8YJL053W YMR316C-AI2HB70 103 aa1.72□□□□□ -2.13
PEP8YJL053W RPC40P07703 335 aaKnown RBP1.72□□□□□ -2.13
PEP8YJL053W RPS23AP0CX29 145 aaKnown RBP1.72□□□□□ -2.13
PEP8YJL053W RPS23BP0CX30 145 aa1.72□□□□□ -2.13
PEP8YJL053W DAL5P15365 543 aa1.72□□□□□ -2.13
PEP8YJL053W YSR3P23501 404 aa1.72□□□□□ -2.13
PEP8YJL053W MEK1P24719 497 aaPredicted RBP1.72□□□□□ -2.13
PEP8YJL053W KRE6P32486 720 aa1.72□□□□□ -2.13
PEP8YJL053W MBA1P38300 278 aa1.72□□□□□ -2.13
PEP8YJL053W RPE1P46969 238 aa1.72□□□□□ -2.13
PEP8YJL053W YJL144WP47009 104 aa1.72□□□□□ -2.13
PEP8YJL053W EMC2P47133 292 aaKnown RBP1.72□□□□□ -2.13
PEP8YJL053W MND1P53102 219 aa1.72□□□□□ -2.13
PEP8YJL053W CPD1P53314 239 aa1.72□□□□□ -2.13
PEP8YJL053W MRS2Q01926 470 aa1.72□□□□□ -2.13
PEP8YJL053W YPL113CQ02961 396 aa1.72□□□□□ -2.13
PEP8YJL053W YOR114WQ12219 294 aa1.72□□□□□ -2.13
PEP8YJL053W YAL063C-AQ3E791 96 aa1.72□□□□□ -2.13
PEP8YJL053W SSA3P09435 649 aaKnown RBP1.71□□□□□ -2.14
PEP8YJL053W FRS2P15625 503 aaKnown RBP1.71□□□□□ -2.14
PEP8YJL053W CDC42P19073 191 aa1.71□□□□□ -2.14
PEP8YJL053W PRE7P23724 241 aaKnown RBP1.71□□□□□ -2.14
PEP8YJL053W YCR025CP25352 136 aa1.71□□□□□ -2.14
PEP8YJL053W PEX3P28795 441 aa1.71□□□□□ -2.14
PEP8YJL053W CAM1P29547 415 aaKnown RBP1.71□□□□□ -2.14
PEP8YJL053W CAT2P32796 670 aaKnown RBP1.71□□□□□ -2.14
PEP8YJL053W PHO89P38361 574 aa1.71□□□□□ -2.14
PEP8YJL053W YHI9P38765 294 aa1.71□□□□□ -2.14
PEP8YJL053W SHC1P39000 512 aa1.71□□□□□ -2.14
PEP8YJL053W SYS1P41544 203 aa1.71□□□□□ -2.14
PEP8YJL053W YGL185CP53100 379 aa1.71□□□□□ -2.14
PEP8YJL053W SWT21P53873 357 aaPredicted RBP1.71□□□□□ -2.14
PEP8YJL053W DIA1P54005 336 aa1.71□□□□□ -2.14
PEP8YJL053W SPP2Q02521 185 aa1.71□□□□□ -2.14
PEP8YJL053W VPS60Q03390 229 aa1.71□□□□□ -2.14
PEP8YJL053W GTO3Q04806 366 aa1.71□□□□□ -2.14
PEP8YJL053W DXO1Q06349 442 aa1.71□□□□□ -2.14
PEP8YJL053W PER33Q12144 273 aa1.71□□□□□ -2.14
PEP8YJL053W YPL150WQ12152 901 aa1.71□□□□□ -2.14
PEP8YJL053W FMP16Q12497 93 aa1.71□□□□□ -2.14
PEP8YJL053W NUP157P40064 1391 aaKnown RBP1.71□□□□□ -2.14
PEP8YJL053W SSK22P25390 1331 aaPredicted RBP1.7□□□□□ -2.14
PEP8YJL053W ERG2P32352 222 aa1.7□□□□□ -2.14
PEP8YJL053W YKL070WP36087 169 aa1.7□□□□□ -2.14
PEP8YJL053W SMC2P38989 1170 aaKnown RBP1.7□□□□□ -2.14
PEP8YJL053W AVT7P40501 490 aa1.7□□□□□ -2.14
PEP8YJL053W IBA57P47158 497 aa1.7□□□□□ -2.14
PEP8YJL053W TPN1P53099 579 aa1.7□□□□□ -2.14
PEP8YJL053W OSH6Q02201 448 aa1.7□□□□□ -2.14
PEP8YJL053W TRM44Q02648 567 aaKnown RBP1.7□□□□□ -2.14
PEP8YJL053W TVP15Q03860 143 aa1.7□□□□□ -2.14
PEP8YJL053W SWR1Q05471 1514 aa1.7□□□□□ -2.14
PEP8YJL053W YEL009C-AA0A023PZF2 135 aa1.69□□□□□ -2.14
PEP8YJL053W YAL064W-BO13512 126 aa1.69□□□□□ -2.14
PEP8YJL053W PET494P07390 489 aaPredicted RBP1.69□□□□□ -2.14
PEP8YJL053W MET2P08465 486 aa1.69□□□□□ -2.14
PEP8YJL053W BMH1P29311 267 aaKnown RBP1.69□□□□□ -2.14
PEP8YJL053W ALK2P32789 676 aaPredicted RBP1.69□□□□□ -2.14
PEP8YJL053W COT1P32798 439 aa1.69□□□□□ -2.14
PEP8YJL053W CAB3P36076 571 aa1.69□□□□□ -2.14
Retrieved 100 of 5,963 RNA–protein pairs in 82.6 ms