RNA–Protein interactions for RNA: YIL123W

SIM1, Transcript of Protein of the SUN family (Sim1p, Uth1p, Nca3p, Sun4p), yeastyeast

Gene SIM1, Length 1,431 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SIM1YIL123W SLS1P42900 643 aa10.07□□□□□ -0.8
SIM1YIL123W RPL17BP46990 184 aaKnown RBP10.07□□□□□ -0.8
SIM1YIL123W FRE7Q12333 620 aa10.07□□□□□ -0.8
SIM1YIL123W MTR10Q99189 972 aa10.07□□□□□ -0.8
SIM1YIL123W RPS13P05756 151 aaKnown RBP10.07□□□□□ -0.8
SIM1YIL123W SAR1P20606 190 aaKnown RBP10.07□□□□□ -0.8
SIM1YIL123W CPR2P23285 205 aa10.07□□□□□ -0.8
SIM1YIL123W SRP102P36057 244 aaPredicted RBP10.07□□□□□ -0.8
SIM1YIL123W YKR073CP36153 106 aa10.07□□□□□ -0.8
SIM1YIL123W VMA22P38784 181 aa10.07□□□□□ -0.8
SIM1YIL123W ECL1P48235 211 aa10.07□□□□□ -0.8
SIM1YIL123W LYS20P48570 428 aaKnown RBP10.07□□□□□ -0.8
SIM1YIL123W BRR6P53062 197 aa10.07□□□□□ -0.8
SIM1YIL123W TRS23Q03784 219 aa10.07□□□□□ -0.8
SIM1YIL123W BNA7Q04066 261 aa10.07□□□□□ -0.8
SIM1YIL123W COX20Q04935 205 aa10.07□□□□□ -0.8
SIM1YIL123W MRX8Q05473 314 aa10.07□□□□□ -0.8
SIM1YIL123W ORM2Q06144 216 aa10.07□□□□□ -0.8
SIM1YIL123W KEI1Q06346 221 aa10.07□□□□□ -0.8
SIM1YIL123W YPR147CQ06522 304 aaKnown RBP10.07□□□□□ -0.8
SIM1YIL123W RTC5Q12108 567 aaKnown RBP10.07□□□□□ -0.8
SIM1YIL123W LYS21Q12122 440 aaKnown RBP10.07□□□□□ -0.8
SIM1YIL123W INP53Q12271 1107 aa10.07□□□□□ -0.8
SIM1YIL123W CNE1P27825 502 aa10.06□□□□□ -0.8
SIM1YIL123W PPA2P28239 310 aa10.06□□□□□ -0.8
SIM1YIL123W RNP1P32385 249 aa10.06□□□□□ -0.8
SIM1YIL123W UME6P39001 836 aa10.06□□□□□ -0.8
SIM1YIL123W MNN5P46982 586 aa10.06□□□□□ -0.8
SIM1YIL123W ASR1Q06834 288 aa10.06□□□□□ -0.8
SIM1YIL123W HTZ1Q12692 134 aaKnown RBP10.06□□□□□ -0.8
SIM1YIL123W RPP2BP02400 110 aaKnown RBP10.05□□□□□ -0.8
SIM1YIL123W DIT1P21623 536 aa10.05□□□□□ -0.8
SIM1YIL123W SPT10P35208 640 aa10.05□□□□□ -0.8
SIM1YIL123W MRPL3P36516 390 aa10.05□□□□□ -0.8
SIM1YIL123W MIM1Q08176 113 aa10.05□□□□□ -0.8
SIM1YIL123W YOR376WQ08900 122 aa10.05□□□□□ -0.8
SIM1YIL123W GRX2P17695 143 aaKnown RBP10.04□□□□□ -0.8
SIM1YIL123W SIT1P39980 628 aa10.04□□□□□ -0.8
SIM1YIL123W SMB1P40018 196 aaKnown RBP10.04□□□□□ -0.8
SIM1YIL123W AIM25P47140 327 aa10.04□□□□□ -0.8
SIM1YIL123W OCA1P50946 238 aaPredicted RBP10.04□□□□□ -0.8
SIM1YIL123W MTM1P53320 366 aa10.04□□□□□ -0.8
SIM1YIL123W CGI121Q03705 181 aaKnown RBP10.04□□□□□ -0.8
SIM1YIL123W AKR2Q12013 749 aa10.04□□□□□ -0.8
SIM1YIL123W TY1A-BLQ12266 440 aa10.04□□□□□ -0.8
SIM1YIL123W RAD52P06778 471 aaKnown RBP10.03□□□□□ -0.8
SIM1YIL123W MATALPHA1P0CY06 175 aa10.03□□□□□ -0.8
SIM1YIL123W HMLALPHA1P0CY07 175 aa10.03□□□□□ -0.8
SIM1YIL123W NHP6BP11633 99 aaKnown RBP10.03□□□□□ -0.8
SIM1YIL123W TAT1P38085 619 aa10.03□□□□□ -0.8
SIM1YIL123W YHR122WP38829 231 aa10.03□□□□□ -0.8
SIM1YIL123W YER010CP40011 234 aa10.03□□□□□ -0.8
SIM1YIL123W CAT5P41735 233 aa10.03□□□□□ -0.8
SIM1YIL123W MTL1P53214 551 aa10.03□□□□□ -0.8
SIM1YIL123W VHT1P53241 593 aa10.03□□□□□ -0.8
SIM1YIL123W YGR126WP53274 230 aa10.03□□□□□ -0.8
SIM1YIL123W RDL2Q08742 149 aaKnown RBP10.03□□□□□ -0.8
SIM1YIL123W MDM32Q12171 622 aa10.03□□□□□ -0.8
SIM1YIL123W SWM1Q12379 170 aa10.03□□□□□ -0.8
SIM1YIL123W BRR2P32639 2163 aaKnown RBP10.03□□□□□ -0.8
SIM1YIL123W YPT1P01123 206 aaKnown RBP10.02□□□□□ -0.81
SIM1YIL123W RPC34P32910 317 aa10.02□□□□□ -0.81
SIM1YIL123W PGU1P47180 361 aa10.02□□□□□ -0.81
SIM1YIL123W ATG21Q02887 496 aa10.02□□□□□ -0.81
SIM1YIL123W PEX25Q02969 394 aa10.02□□□□□ -0.81
SIM1YIL123W AGE1Q04412 482 aa10.02□□□□□ -0.81
SIM1YIL123W YOR032W-AQ8TGS1 66 aa10.02□□□□□ -0.81
SIM1YIL123W PET122P10355 254 aa10.01□□□□□ -0.81
SIM1YIL123W STE18P18852 110 aa10.01□□□□□ -0.81
SIM1YIL123W ERG4P25340 473 aa10.01□□□□□ -0.81
SIM1YIL123W PPG1P32838 368 aa10.01□□□□□ -0.81
SIM1YIL123W SYG1P40528 902 aa10.01□□□□□ -0.81
SIM1YIL123W SYS1P41544 203 aa10.01□□□□□ -0.81
SIM1YIL123W RMD9P53140 646 aaKnown RBP10.01□□□□□ -0.81
SIM1YIL123W YLR152CP54072 576 aa10.01□□□□□ -0.81
SIM1YIL123W SYC1Q08553 188 aaPredicted RBP10.01□□□□□ -0.81
SIM1YIL123W GRE1Q08969 168 aa10.01□□□□□ -0.81
SIM1YIL123W YAL064W-BO13512 126 aa10□□□□□ -0.81
SIM1YIL123W MSW1P04803 379 aa10□□□□□ -0.81
SIM1YIL123W YHR214C-DP0CX93 97 aa10□□□□□ -0.81
SIM1YIL123W CDC23P16522 626 aa10□□□□□ -0.81
SIM1YIL123W MEK1P24719 497 aaPredicted RBP10□□□□□ -0.81
SIM1YIL123W PDR3P33200 976 aa10□□□□□ -0.81
SIM1YIL123W UBS1P38290 277 aa10□□□□□ -0.81
SIM1YIL123W PMT3P47190 753 aa10□□□□□ -0.81
SIM1YIL123W MRPL50P53724 139 aa10□□□□□ -0.81
SIM1YIL123W PET191Q02772 108 aa10□□□□□ -0.81
SIM1YIL123W YPL039WQ03080 316 aa10□□□□□ -0.81
SIM1YIL123W NGL2Q03264 515 aaKnown RBP10□□□□□ -0.81
SIM1YIL123W NNT1Q05874 261 aa10□□□□□ -0.81
SIM1YIL123W MDM30Q05930 598 aa10□□□□□ -0.81
SIM1YIL123W GAS2Q06135 555 aa10□□□□□ -0.81
SIM1YIL123W MCH4Q08268 501 aa10□□□□□ -0.81
SIM1YIL123W NIP7Q08962 181 aaKnown RBP10□□□□□ -0.81
SIM1YIL123W PIN2Q12057 282 aa10□□□□□ -0.81
SIM1YIL123W ORT1Q12375 292 aa10□□□□□ -0.81
SIM1YIL123W HMS1Q12398 434 aa10□□□□□ -0.81
SIM1YIL123W NOP56Q12460 504 aaKnown RBP RIP-Chip data10□□□□□ -0.81 RIP-Chip
SIM1YIL123W RNA14P25298 677 aaKnown RBP9.99□□□□□ -0.81
SIM1YIL123W MKS1P34072 584 aa9.99□□□□□ -0.81
Retrieved 100 of 5,963 RNA–protein pairs in 12.2 ms