RNA–Protein interactions for RNA: YHR003C

TCD1, Transcript of tRNA threonylcarbamoyladenosine dehydratase, yeastyeast

Gene TCD1, Length 1,290 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TCD1YHR003C GGA1Q06336 557 aa2.53□□□□□ -2
TCD1YHR003C PBP4Q07362 185 aaKnown RBP2.53□□□□□ -2
TCD1YHR003C YDL144CQ07589 356 aa2.53□□□□□ -2
TCD1YHR003C BRX1Q08235 291 aaKnown RBP2.53□□□□□ -2
TCD1YHR003C APC9Q12107 265 aa2.53□□□□□ -2
TCD1YHR003C TPT1Q12272 230 aaKnown RBP2.53□□□□□ -2
TCD1YHR003C ERP3Q12403 225 aa2.53□□□□□ -2
TCD1YHR003C YCL012CQ8J0M4 134 aa2.53□□□□□ -2
TCD1YHR003C RPL20AP0CX23 172 aaKnown RBP2.52□□□□□ -2.01
TCD1YHR003C RPL20BP0CX24 172 aaPredicted RBP2.52□□□□□ -2.01
TCD1YHR003C NAM2P11325 894 aa2.52□□□□□ -2.01
TCD1YHR003C NOP1P15646 327 aaKnown RBP2.52□□□□□ -2.01
TCD1YHR003C SNF6P18888 332 aa2.52□□□□□ -2.01
TCD1YHR003C EXO70P19658 623 aa2.52□□□□□ -2.01
TCD1YHR003C AGA1P32323 725 aa2.52□□□□□ -2.01
TCD1YHR003C SPS19P32573 292 aaKnown RBP2.52□□□□□ -2.01
TCD1YHR003C IES6P32617 166 aa2.52□□□□□ -2.01
TCD1YHR003C YEF1P32622 495 aa2.52□□□□□ -2.01
TCD1YHR003C SSO1P32867 290 aa2.52□□□□□ -2.01
TCD1YHR003C MRPL6P32904 214 aa2.52□□□□□ -2.01
TCD1YHR003C YKL097CP34245 136 aa2.52□□□□□ -2.01
TCD1YHR003C YKL063CP35725 167 aa2.52□□□□□ -2.01
TCD1YHR003C YBR056WP38081 501 aa2.52□□□□□ -2.01
TCD1YHR003C FES1P38260 290 aa2.52□□□□□ -2.01
TCD1YHR003C MTC4P38335 694 aaKnown RBP2.52□□□□□ -2.01
TCD1YHR003C MIC12P38341 106 aa2.52□□□□□ -2.01
TCD1YHR003C TDA11P38854 504 aa2.52□□□□□ -2.01
TCD1YHR003C RPL10P41805 221 aaKnown RBP2.52□□□□□ -2.01
TCD1YHR003C IDP2P41939 412 aa2.52□□□□□ -2.01
TCD1YHR003C YCH1P42937 148 aa2.52□□□□□ -2.01
TCD1YHR003C YGR210CP42942 411 aa2.52□□□□□ -2.01
TCD1YHR003C TAD2P47058 250 aa2.52□□□□□ -2.01
TCD1YHR003C GET1P53192 235 aa2.52□□□□□ -2.01
TCD1YHR003C NOP19P53317 196 aaPredicted RBP2.52□□□□□ -2.01
TCD1YHR003C MTQ1P53944 314 aa2.52□□□□□ -2.01
TCD1YHR003C SPR6Q01684 191 aa2.52□□□□□ -2.01
TCD1YHR003C IRC4Q03036 179 aa2.52□□□□□ -2.01
TCD1YHR003C EBS1Q03466 884 aaKnown RBP2.52□□□□□ -2.01
TCD1YHR003C OST6Q03723 332 aa2.52□□□□□ -2.01
TCD1YHR003C VBA1Q04301 562 aa2.52□□□□□ -2.01
TCD1YHR003C CSM3Q04659 317 aa2.52□□□□□ -2.01
TCD1YHR003C CDD1Q06549 142 aa2.52□□□□□ -2.01
TCD1YHR003C ASR1Q06834 288 aa2.52□□□□□ -2.01
TCD1YHR003C NDE2Q07500 545 aa2.52□□□□□ -2.01
TCD1YHR003C YOR387CQ08910 206 aa2.52□□□□□ -2.01
TCD1YHR003C YPQ1Q12010 308 aa2.52□□□□□ -2.01
TCD1YHR003C YDL009CQ12210 107 aa2.52□□□□□ -2.01
TCD1YHR003C AYT1Q12226 474 aa2.52□□□□□ -2.01
TCD1YHR003C NCA2Q12374 616 aa2.52□□□□□ -2.01
TCD1YHR003C SIR4P11978 1358 aa2.51□□□□□ -2.01
TCD1YHR003C HTB1P02293 131 aaKnown RBP2.51□□□□□ -2.01
TCD1YHR003C HTB2P02294 131 aa2.51□□□□□ -2.01
TCD1YHR003C RPL31AP0C2H8 113 aaKnown RBP2.51□□□□□ -2.01
TCD1YHR003C ATR1P13090 542 aa2.51□□□□□ -2.01
TCD1YHR003C POX1P13711 748 aa2.51□□□□□ -2.01
TCD1YHR003C RNA15P25299 296 aaPredicted RBP2.51□□□□□ -2.01
TCD1YHR003C YCR100CP25606 316 aa2.51□□□□□ -2.01
TCD1YHR003C MUD1P32605 298 aaKnown RBP2.51□□□□□ -2.01
TCD1YHR003C ZRT1P32804 376 aa2.51□□□□□ -2.01
TCD1YHR003C SPO23P33757 523 aa2.51□□□□□ -2.01
TCD1YHR003C TIR2P33890 251 aa2.51□□□□□ -2.01
TCD1YHR003C AST1P35183 429 aa2.51□□□□□ -2.01
TCD1YHR003C YCR041WP37265 110 aa2.51□□□□□ -2.01
TCD1YHR003C ECM8P38246 354 aa2.51□□□□□ -2.01
TCD1YHR003C YNL194CP40169 301 aa2.51□□□□□ -2.01
TCD1YHR003C PRE6P40303 254 aaKnown RBP2.51□□□□□ -2.01
TCD1YHR003C YPI1P43587 155 aa2.51□□□□□ -2.01
TCD1YHR003C ASG7P46993 209 aa2.51□□□□□ -2.01
TCD1YHR003C PHB2P50085 310 aa2.51□□□□□ -2.01
TCD1YHR003C YPT32P51996 222 aaKnown RBP2.51□□□□□ -2.01
TCD1YHR003C CPD1P53314 239 aa2.51□□□□□ -2.01
TCD1YHR003C ZRG17P53735 605 aa2.51□□□□□ -2.01
TCD1YHR003C CAF40P53829 373 aa2.51□□□□□ -2.01
TCD1YHR003C YPL080CQ02826 108 aa2.51□□□□□ -2.01
TCD1YHR003C ODC1Q03028 310 aa2.51□□□□□ -2.01
TCD1YHR003C MRPL51Q06090 140 aaPredicted RBP2.51□□□□□ -2.01
TCD1YHR003C GAT3Q07928 141 aa2.51□□□□□ -2.01
TCD1YHR003C DET1Q99288 334 aaKnown RBP2.51□□□□□ -2.01
TCD1YHR003C FLO1P32768 1537 aa2.51□□□□□ -2.01
TCD1YHR003C YDR157WA0A023PZE8 133 aa2.5□□□□□ -2.01
TCD1YHR003C TEF1P02994 458 aaKnown RBP2.5□□□□□ -2.01
TCD1YHR003C SSC1P0CS90 654 aaKnown RBP2.5□□□□□ -2.01
TCD1YHR003C YAR066WP0CX18 203 aa2.5□□□□□ -2.01
TCD1YHR003C YHR214WP0CX19 203 aa2.5□□□□□ -2.01
TCD1YHR003C RPS24AP0CX31 135 aaKnown RBP2.5□□□□□ -2.01
TCD1YHR003C RPS24BP0CX32 135 aaKnown RBP2.5□□□□□ -2.01
TCD1YHR003C SLY1P22213 666 aa2.5□□□□□ -2.01
TCD1YHR003C RFA3P26755 122 aaKnown RBP2.5□□□□□ -2.01
TCD1YHR003C TIP1P27654 210 aaPredicted RBP2.5□□□□□ -2.01
TCD1YHR003C NAM9P27929 486 aa2.5□□□□□ -2.01
TCD1YHR003C PRX1P34227 261 aaKnown RBP2.5□□□□□ -2.01
TCD1YHR003C PMU1P36069 295 aa2.5□□□□□ -2.01
TCD1YHR003C DTR1P38125 572 aa2.5□□□□□ -2.01
TCD1YHR003C GPX2P38143 162 aa2.5□□□□□ -2.01
TCD1YHR003C YHK8P38776 514 aa2.5□□□□□ -2.01
TCD1YHR003C GEP4P38812 185 aa2.5□□□□□ -2.01
TCD1YHR003C IKI1P38874 309 aa2.5□□□□□ -2.01
TCD1YHR003C YER184CP39961 794 aa2.5□□□□□ -2.01
TCD1YHR003C COX15P40086 486 aa2.5□□□□□ -2.01
TCD1YHR003C POG1P40473 351 aa2.5□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 26.2 ms