RNA–Protein interactions for RNA: YFL004W

VTC2, Transcript of Subunit of vacuolar transporter chaperone (VTC) complex, yeast

Gene VTC2, Length 2,487 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VTC2	YFL004W	YSA1	Q01976	231 aa		5.04	□□□□□ -1.6
VTC2	YFL004W	YDC1	Q02896	317 aa		5.04	□□□□□ -1.6
VTC2	YFL004W	MRP51	Q02950	344 aa		5.04	□□□□□ -1.6
VTC2	YFL004W	ATC1	Q04005	294 aa		5.04	□□□□□ -1.6
VTC2	YFL004W	ARG7	Q04728	441 aa		5.04	□□□□□ -1.6
VTC2	YFL004W	FRQ1	Q06389	190 aa		5.04	□□□□□ -1.6
VTC2	YFL004W	FDH1	Q08911	376 aa		5.04	□□□□□ -1.6
VTC2	YFL004W	DDC1	Q08949	612 aa		5.04	□□□□□ -1.6
VTC2	YFL004W	YDL085C-A	Q3E7B7	68 aa	Known RBP	5.04	□□□□□ -1.6
VTC2	YFL004W	YNR034W-A	Q3E841	98 aa		5.04	□□□□□ -1.6
VTC2	YFL004W	STT4	P37297	1900 aa		5.04	□□□□□ -1.6
VTC2	YFL004W	AI3	P03877	415 aa		5.03	□□□□□ -1.6
VTC2	YFL004W	MRPL4	P36517	319 aa		5.03	□□□□□ -1.6
VTC2	YFL004W	LDH1	P38139	375 aa		5.03	□□□□□ -1.6
VTC2	YFL004W	PAU15	P40585	124 aa		5.03	□□□□□ -1.6
VTC2	YFL004W	IBA57	P47158	497 aa		5.03	□□□□□ -1.6
VTC2	YFL004W	COG7	P53195	279 aa		5.03	□□□□□ -1.6
VTC2	YFL004W	RNH70	P53331	553 aa		5.03	□□□□□ -1.6
VTC2	YFL004W	APM1	Q00776	475 aa	Predicted RBP	5.03	□□□□□ -1.6
VTC2	YFL004W	MET31	Q03081	177 aa		5.03	□□□□□ -1.6
VTC2	YFL004W	UTP15	Q04305	513 aa	Known RBP	5.03	□□□□□ -1.6
VTC2	YFL004W	YDR056C	Q12025	205 aa		5.03	□□□□□ -1.6
VTC2	YFL004W	BTS1	Q12051	335 aa		5.03	□□□□□ -1.6
VTC2	YFL004W	PRM4	Q12498	284 aa		5.03	□□□□□ -1.6
VTC2	YFL004W	FSH3	Q99369	266 aa		5.03	□□□□□ -1.6
VTC2	YFL004W	QCR7	P00128	127 aa		5.03	□□□□□ -1.6
VTC2	YFL004W	SGA1	P08019	549 aa		5.03	□□□□□ -1.6
VTC2	YFL004W	PET18	P25362	215 aa		5.03	□□□□□ -1.6
VTC2	YFL004W	MF(ALPHA)2	P32435	120 aa		5.03	□□□□□ -1.6
VTC2	YFL004W	PUB1	P32588	453 aa	Known RBP RIP-Chip data	5.03	□□□□□ -1.6	not detected
VTC2	YFL004W	YEF1	P32622	495 aa		5.03	□□□□□ -1.6
VTC2	YFL004W	NTF2	P33331	125 aa	Known RBP	5.03	□□□□□ -1.6
VTC2	YFL004W	ADD66	P36040	267 aa		5.03	□□□□□ -1.6
VTC2	YFL004W	PAU24	P38155	120 aa		5.03	□□□□□ -1.6
VTC2	YFL004W	CHS7	P38843	316 aa		5.03	□□□□□ -1.6
VTC2	YFL004W	HXT14	P42833	540 aa		5.03	□□□□□ -1.6
VTC2	YFL004W	CCC1	P47818	322 aa		5.03	□□□□□ -1.6
VTC2	YFL004W	MEP3	P53390	489 aa		5.03	□□□□□ -1.6
VTC2	YFL004W	YNL034W	P53963	612 aa		5.03	□□□□□ -1.6
VTC2	YFL004W	STD1	Q02794	444 aa		5.03	□□□□□ -1.6
VTC2	YFL004W	SEC13	Q04491	297 aa	Known RBP	5.03	□□□□□ -1.6
VTC2	YFL004W	ELP6	Q04868	273 aa		5.03	□□□□□ -1.6
VTC2	YFL004W	RRP45	Q05636	305 aa	Known RBP	5.03	□□□□□ -1.6
VTC2	YFL004W	CDD1	Q06549	142 aa		5.03	□□□□□ -1.6
VTC2	YFL004W	SRO7	Q12038	1033 aa		5.03	□□□□□ -1.6
VTC2	YFL004W	RTK1	Q12100	620 aa	Predicted RBP	5.03	□□□□□ -1.6
VTC2	YFL004W	TFC7	Q12415	435 aa		5.03	□□□□□ -1.6
VTC2	YFL004W	FRE6	Q12473	712 aa		5.03	□□□□□ -1.6
VTC2	YFL004W	PHO2	P07269	559 aa		5.02	□□□□□ -1.61
VTC2	YFL004W	RFA1	P22336	621 aa	Known RBP	5.02	□□□□□ -1.61
VTC2	YFL004W	PPH21	P23594	369 aa		5.02	□□□□□ -1.61
VTC2	YFL004W	VMA3	P25515	160 aa		5.02	□□□□□ -1.61
VTC2	YFL004W	PBN1	P25580	416 aa		5.02	□□□□□ -1.61
VTC2	YFL004W	YCR087C-A	P37263	153 aa		5.02	□□□□□ -1.61
VTC2	YFL004W	POP8	P38208	133 aa		5.02	□□□□□ -1.61
VTC2	YFL004W	TAT2	P38967	592 aa		5.02	□□□□□ -1.61
VTC2	YFL004W	HMF1	P40037	129 aa	Known RBP	5.02	□□□□□ -1.61
VTC2	YFL004W	YIL165C	P40446	119 aa		5.02	□□□□□ -1.61
VTC2	YFL004W	TES1	P41903	349 aa	Known RBP	5.02	□□□□□ -1.61
VTC2	YFL004W	YJR012C	P47087	207 aa		5.02	□□□□□ -1.61
VTC2	YFL004W	SAE3	P89114	91 aa		5.02	□□□□□ -1.61
VTC2	YFL004W	YPL062W	Q02781	134 aa		5.02	□□□□□ -1.61
VTC2	YFL004W	RSM10	Q03201	203 aa		5.02	□□□□□ -1.61
VTC2	YFL004W	GSF2	Q04697	403 aa	Known RBP	5.02	□□□□□ -1.61
VTC2	YFL004W	PER33	Q12144	273 aa		5.02	□□□□□ -1.61
VTC2	YFL004W	COX3	P00420	269 aa		5.02	□□□□□ -1.61
VTC2	YFL004W	PDX1	P16451	410 aa		5.02	□□□□□ -1.61
VTC2	YFL004W	TIP1	P27654	210 aa	Predicted RBP	5.02	□□□□□ -1.61
VTC2	YFL004W	ATS1	P31386	333 aa		5.02	□□□□□ -1.61
VTC2	YFL004W	PNT1	P38969	423 aa		5.02	□□□□□ -1.61
VTC2	YFL004W	PET130	P47065	347 aa		5.02	□□□□□ -1.61
VTC2	YFL004W	FAA4	P47912	694 aa	Known RBP	5.02	□□□□□ -1.61
VTC2	YFL004W	GIM3	P53900	129 aa		5.02	□□□□□ -1.61
VTC2	YFL004W	YDR415C	Q04033	374 aa	Predicted RBP	5.02	□□□□□ -1.61
VTC2	YFL004W	GRX8	Q05926	109 aa		5.02	□□□□□ -1.61
VTC2	YFL004W	RFU1	Q08003	200 aa		5.02	□□□□□ -1.61
VTC2	YFL004W	YPL272C	Q08984	517 aa		5.02	□□□□□ -1.61
VTC2	YFL004W	ADH2	P00331	348 aa	Known RBP	5.01	□□□□□ -1.61
VTC2	YFL004W	SNF5	P18480	905 aa		5.01	□□□□□ -1.61
VTC2	YFL004W	PRE1	P22141	198 aa	Known RBP	5.01	□□□□□ -1.61
VTC2	YFL004W	GSP1	P32835	219 aa	Known RBP	5.01	□□□□□ -1.61
VTC2	YFL004W	GSP2	P32836	220 aa	Known RBP	5.01	□□□□□ -1.61
VTC2	YFL004W	MCR1	P36060	302 aa	Known RBP	5.01	□□□□□ -1.61
VTC2	YFL004W	REG2	P38232	338 aa		5.01	□□□□□ -1.61
VTC2	YFL004W	MDM34	P53083	459 aa		5.01	□□□□□ -1.61
VTC2	YFL004W	YGL101W	P53144	215 aa		5.01	□□□□□ -1.61
VTC2	YFL004W	PAU12	P53343	120 aa		5.01	□□□□□ -1.61
VTC2	YFL004W	EFM6	P53970	246 aa		5.01	□□□□□ -1.61
VTC2	YFL004W	EST3	Q03096	181 aa		5.01	□□□□□ -1.61
VTC2	YFL004W	CTL1	Q03220	320 aa	Known RBP	5.01	□□□□□ -1.61
VTC2	YFL004W	HLR1	Q04429	423 aa		5.01	□□□□□ -1.61
VTC2	YFL004W	YMR252C	Q04814	134 aa		5.01	□□□□□ -1.61
VTC2	YFL004W	BER1	Q06688	274 aa	Known RBP	5.01	□□□□□ -1.61
VTC2	YFL004W	AIM6	Q07716	390 aa		5.01	□□□□□ -1.61
VTC2	YFL004W	PCL9	Q12477	304 aa		5.01	□□□□□ -1.61
VTC2	YFL004W	PNO1	Q99216	274 aa	Known RBP	5.01	□□□□□ -1.61
VTC2	YFL004W	ATG15	P25641	520 aa		5.01	□□□□□ -1.61
VTC2	YFL004W	MOT2	P34909	587 aa	Known RBP	5.01	□□□□□ -1.61
VTC2	YFL004W	IRS4	P36115	615 aa	Known RBP	5.01	□□□□□ -1.61
VTC2	YFL004W	MRPL11	P36521	249 aa	Predicted RBP	5.01	□□□□□ -1.61

Retrieved 100 of 5,963 RNA–protein pairs in 15.8 ms