RNA–Protein interactions for RNA: YFL002C

SPB4, Transcript of Putative ATP-dependent RNA helicase, yeastyeast

Gene SPB4, Length 1,821 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPB4YFL002C SCS7Q03529 384 aa3.42□□□□□ -1.86
SPB4YFL002C YOR114WQ12219 294 aa3.42□□□□□ -1.86
SPB4YFL002C LAG2Q92325 660 aa3.42□□□□□ -1.86
SPB4YFL002C BI3Q9ZZW7 517 aa3.42□□□□□ -1.86
SPB4YFL002C HHF1P02309 103 aaKnown RBP3.42□□□□□ -1.86
SPB4YFL002C RPS3P05750 240 aaKnown RBP3.42□□□□□ -1.86
SPB4YFL002C MRPL20P22354 195 aaPredicted RBP3.42□□□□□ -1.86
SPB4YFL002C AEP1P32493 518 aa3.42□□□□□ -1.86
SPB4YFL002C CBT1P36038 271 aaPredicted RBP3.42□□□□□ -1.86
SPB4YFL002C ATG12P38316 186 aa3.42□□□□□ -1.86
SPB4YFL002C PTH1P38876 190 aaKnown RBP3.42□□□□□ -1.86
SPB4YFL002C VAB2P40003 282 aa3.42□□□□□ -1.86
SPB4YFL002C ZRG17P53735 605 aa3.42□□□□□ -1.86
SPB4YFL002C PRP38Q00723 242 aaPredicted RBP3.42□□□□□ -1.86
SPB4YFL002C RNY1Q02933 434 aaKnown RBP3.42□□□□□ -1.86
SPB4YFL002C YPL245WQ12179 454 aaKnown RBP3.42□□□□□ -1.86
SPB4YFL002C PET494P07390 489 aaPredicted RBP3.41□□□□□ -1.86
SPB4YFL002C YBR121C-AP0C5L4 52 aa3.41□□□□□ -1.86
SPB4YFL002C YMR31P19955 123 aa3.41□□□□□ -1.86
SPB4YFL002C HOM6P31116 359 aaKnown RBP3.41□□□□□ -1.86
SPB4YFL002C ARC19P33204 171 aaKnown RBP3.41□□□□□ -1.86
SPB4YFL002C YBR241CP38142 488 aa3.41□□□□□ -1.86
SPB4YFL002C URA8P38627 578 aaPredicted RBP3.41□□□□□ -1.86
SPB4YFL002C ERG28P40030 148 aa3.41□□□□□ -1.86
SPB4YFL002C YER186CP40101 306 aa3.41□□□□□ -1.86
SPB4YFL002C DSN1P40568 576 aa3.41□□□□□ -1.86
SPB4YFL002C BIR1P47134 954 aa3.41□□□□□ -1.86
SPB4YFL002C JHD2P47156 728 aaPredicted RBP3.41□□□□□ -1.86
SPB4YFL002C YPS5P53057 165 aa3.41□□□□□ -1.86
SPB4YFL002C YNL095CP53932 642 aa3.41□□□□□ -1.86
SPB4YFL002C ELP3Q02908 557 aaKnown RBP3.41□□□□□ -1.86
SPB4YFL002C MHR1Q06630 226 aa3.41□□□□□ -1.86
SPB4YFL002C IZH2Q12442 317 aa3.41□□□□□ -1.86
SPB4YFL002C OSM1P21375 501 aaKnown RBP3.4□□□□□ -1.86
SPB4YFL002C TPS2P31688 896 aaKnown RBP3.4□□□□□ -1.86
SPB4YFL002C PAN6P40459 309 aa3.4□□□□□ -1.86
SPB4YFL002C REE1P40893 198 aa3.4□□□□□ -1.86
SPB4YFL002C YJR079WP47126 109 aa3.4□□□□□ -1.86
SPB4YFL002C HSH155P49955 971 aaKnown RBP3.4□□□□□ -1.86
SPB4YFL002C USE1P53146 245 aa3.4□□□□□ -1.86
SPB4YFL002C SKI8Q02793 397 aaPredicted RBP3.4□□□□□ -1.86
SPB4YFL002C HRI1Q05905 244 aaKnown RBP3.4□□□□□ -1.86
SPB4YFL002C SEC10Q06245 871 aa3.4□□□□□ -1.86
SPB4YFL002C FDH1Q08911 376 aa3.4□□□□□ -1.86
SPB4YFL002C YCT1Q12235 531 aa3.4□□□□□ -1.86
SPB4YFL002C YAL064W-BO13512 126 aa3.4□□□□□ -1.87
SPB4YFL002C YPT53P36019 220 aa3.4□□□□□ -1.87
SPB4YFL002C YBR062CP38239 180 aa3.4□□□□□ -1.87
SPB4YFL002C YJR054WP47114 497 aa3.4□□□□□ -1.87
SPB4YFL002C NBP35P52920 328 aa3.4□□□□□ -1.87
SPB4YFL002C YNR066CP53752 436 aa3.4□□□□□ -1.87
SPB4YFL002C SWS2P53937 143 aa3.4□□□□□ -1.87
SPB4YFL002C ADD37Q03233 198 aa3.4□□□□□ -1.87
SPB4YFL002C YML018CQ03730 393 aa3.4□□□□□ -1.87
SPB4YFL002C IRC25Q07951 179 aa3.4□□□□□ -1.87
SPB4YFL002C MIM1Q08176 113 aa3.4□□□□□ -1.87
SPB4YFL002C FOL3Q12676 427 aaPredicted RBP3.4□□□□□ -1.87
SPB4YFL002C YKL183C-AQ3E765 70 aa3.4□□□□□ -1.87
SPB4YFL002C YBR298C-AQ8TGK4 73 aa3.4□□□□□ -1.87
SPB4YFL002C MATALPHA2P0CY08 210 aa3.39□□□□□ -1.87
SPB4YFL002C HMLALPHA2P0CY09 210 aa3.39□□□□□ -1.87
SPB4YFL002C SPT15P13393 240 aaKnown RBP3.39□□□□□ -1.87
SPB4YFL002C POX1P13711 748 aa3.39□□□□□ -1.87
SPB4YFL002C YBL059WP34224 193 aa3.39□□□□□ -1.87
SPB4YFL002C JEN1P36035 616 aa3.39□□□□□ -1.87
SPB4YFL002C BMT2P38278 337 aa3.39□□□□□ -1.87
SPB4YFL002C COX15P40086 486 aa3.39□□□□□ -1.87
SPB4YFL002C SDS23P53172 527 aa3.39□□□□□ -1.87
SPB4YFL002C YGR015CP53208 328 aa3.39□□□□□ -1.87
SPB4YFL002C ASI3P53983 676 aa3.39□□□□□ -1.87
SPB4YFL002C SMD2Q06217 110 aaKnown RBP3.39□□□□□ -1.87
SPB4YFL002C YLR177WQ06251 628 aa3.39□□□□□ -1.87
SPB4YFL002C YRA1Q12159 226 aaKnown RBP3.39□□□□□ -1.87
SPB4YFL002C STH1P32597 1359 aa3.38□□□□□ -1.87
SPB4YFL002C STE7P06784 515 aa3.38□□□□□ -1.87
SPB4YFL002C APA2P22108 325 aa3.38□□□□□ -1.87
SPB4YFL002C CMK2P22517 447 aa3.38□□□□□ -1.87
SPB4YFL002C NAM9P27929 486 aa3.38□□□□□ -1.87
SPB4YFL002C ARO2P28777 376 aaKnown RBP3.38□□□□□ -1.87
SPB4YFL002C PEX3P28795 441 aa3.38□□□□□ -1.87
SPB4YFL002C ALK2P32789 676 aaPredicted RBP3.38□□□□□ -1.87
SPB4YFL002C GPX1P36014 167 aa3.38□□□□□ -1.87
SPB4YFL002C SER33P40510 469 aa3.38□□□□□ -1.87
SPB4YFL002C TPS1Q00764 495 aaKnown RBP3.38□□□□□ -1.87
SPB4YFL002C VPS60Q03390 229 aa3.38□□□□□ -1.87
SPB4YFL002C YOR292CQ08743 309 aa3.38□□□□□ -1.87
SPB4YFL002C TIP41Q12199 356 aa3.38□□□□□ -1.87
SPB4YFL002C SNU23Q12368 194 aaPredicted RBP3.38□□□□□ -1.87
SPB4YFL002C AI5_BETAQ9ZZX0 354 aa3.38□□□□□ -1.87
SPB4YFL002C YCR102CP25608 368 aa3.37□□□□□ -1.87
SPB4YFL002C SHE1P38200 338 aa3.37□□□□□ -1.87
SPB4YFL002C CUE1P38428 203 aa3.37□□□□□ -1.87
SPB4YFL002C YNL194CP40169 301 aa3.37□□□□□ -1.87
SPB4YFL002C CWC23P52868 283 aaPredicted RBP3.37□□□□□ -1.87
SPB4YFL002C NRM1P53718 249 aa3.37□□□□□ -1.87
SPB4YFL002C YMR317WQ04893 1140 aa3.37□□□□□ -1.87
SPB4YFL002C YPL119C-AQ3E751 87 aa3.37□□□□□ -1.87
SPB4YFL002C TPI1P00942 248 aaKnown RBP3.37□□□□□ -1.87
SPB4YFL002C RPL27AP0C2H6 136 aaKnown RBP3.37□□□□□ -1.87
SPB4YFL002C RPL27BP0C2H7 136 aaKnown RBP3.37□□□□□ -1.87
Retrieved 100 of 5,963 RNA–protein pairs in 11.9 ms