RNA–Protein interactions for RNA: YDR371W

CTS2, Transcript of Putative chitinase, yeast

Gene CTS2, Length 1,536 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CTS2	YDR371W	CHO1	P08456	276 aa		4.92	□□□□□ -1.62
CTS2	YDR371W	SEC22	P22214	214 aa		4.92	□□□□□ -1.62
CTS2	YDR371W	PRE7	P23724	241 aa	Known RBP	4.92	□□□□□ -1.62
CTS2	YDR371W	SEC14	P24280	304 aa	Known RBP	4.92	□□□□□ -1.62
CTS2	YDR371W	RNA14	P25298	677 aa	Known RBP	4.92	□□□□□ -1.62
CTS2	YDR371W	ELO2	P25358	347 aa		4.92	□□□□□ -1.62
CTS2	YDR371W	SUA7	P29055	345 aa	Predicted RBP	4.92	□□□□□ -1.62
CTS2	YDR371W	VMA5	P31412	392 aa	Known RBP	4.92	□□□□□ -1.62
CTS2	YDR371W	DCG1	P32460	244 aa		4.92	□□□□□ -1.62
CTS2	YDR371W	CAT2	P32796	670 aa	Known RBP	4.92	□□□□□ -1.62
CTS2	YDR371W	TVP38	P36164	337 aa		4.92	□□□□□ -1.62
CTS2	YDR371W	BNA4	P38169	460 aa		4.92	□□□□□ -1.62
CTS2	YDR371W	VPS52	P39904	641 aa		4.92	□□□□□ -1.62
CTS2	YDR371W	LYS12	P40495	371 aa	Known RBP	4.92	□□□□□ -1.62
CTS2	YDR371W	POP1	P41812	875 aa		4.92	□□□□□ -1.62
CTS2	YDR371W	PTR3	P43606	678 aa		4.92	□□□□□ -1.62
CTS2	YDR371W	ATG27	P46989	271 aa		4.92	□□□□□ -1.62
CTS2	YDR371W	VPS73	P53142	486 aa	Known RBP	4.92	□□□□□ -1.62
CTS2	YDR371W	RIM8	P53179	542 aa		4.92	□□□□□ -1.62
CTS2	YDR371W	TRM13	Q12383	476 aa		4.92	□□□□□ -1.62
CTS2	YDR371W	GAL10	P04397	699 aa		4.91	□□□□□ -1.62
CTS2	YDR371W	NSP1	P14907	823 aa	Known RBP	4.91	□□□□□ -1.62
CTS2	YDR371W	SCL1	P21243	252 aa	Known RBP	4.91	□□□□□ -1.62
CTS2	YDR371W	SLY1	P22213	666 aa		4.91	□□□□□ -1.62
CTS2	YDR371W	YEF1	P32622	495 aa		4.91	□□□□□ -1.62
CTS2	YDR371W	SOF1	P33750	489 aa	Known RBP	4.91	□□□□□ -1.62
CTS2	YDR371W	TOD6	P34219	525 aa		4.91	□□□□□ -1.62
CTS2	YDR371W	MYO3	P36006	1272 aa		4.91	□□□□□ -1.62
CTS2	YDR371W	JEN1	P36035	616 aa		4.91	□□□□□ -1.62
CTS2	YDR371W	SWD2	P36104	329 aa	Predicted RBP	4.91	□□□□□ -1.62
CTS2	YDR371W	SCO2	P38072	301 aa		4.91	□□□□□ -1.62
CTS2	YDR371W	CUE1	P38428	203 aa		4.91	□□□□□ -1.62
CTS2	YDR371W	TDA11	P38854	504 aa		4.91	□□□□□ -1.62
CTS2	YDR371W	RBG1	P39729	369 aa		4.91	□□□□□ -1.62
CTS2	YDR371W	COG3	P40094	801 aa		4.91	□□□□□ -1.62
CTS2	YDR371W	PRE6	P40303	254 aa	Known RBP	4.91	□□□□□ -1.62
CTS2	YDR371W	PDS1	P40316	373 aa	Predicted RBP	4.91	□□□□□ -1.62
CTS2	YDR371W	TAD2	P47058	250 aa		4.91	□□□□□ -1.62
CTS2	YDR371W	GPI14	P47088	403 aa	Known RBP	4.91	□□□□□ -1.62
CTS2	YDR371W	BRR6	P53062	197 aa		4.91	□□□□□ -1.62
CTS2	YDR371W	SAE3	P89114	91 aa		4.91	□□□□□ -1.62
CTS2	YDR371W	YDR132C	Q03900	495 aa		4.91	□□□□□ -1.62
CTS2	YDR371W	TMN2	Q04562	672 aa		4.91	□□□□□ -1.62
CTS2	YDR371W	HNT3	Q08702	217 aa		4.91	□□□□□ -1.62
CTS2	YDR371W	VTS1	Q08831	523 aa	Known RBP RIP-Chip data	4.91	□□□□□ -1.62	not detected
CTS2	YDR371W	APC9	Q12107	265 aa		4.91	□□□□□ -1.62
CTS2	YDR371W	YPR022C	Q12139	1133 aa		4.91	□□□□□ -1.62
CTS2	YDR371W	YLR050C	Q12155	161 aa	Known RBP	4.91	□□□□□ -1.62
CTS2	YDR371W	LCB4	Q12246	624 aa		4.91	□□□□□ -1.62
CTS2	YDR371W	PET9	P18239	318 aa	Known RBP	4.9	□□□□□ -1.63
CTS2	YDR371W	YCR102C	P25608	368 aa		4.9	□□□□□ -1.63
CTS2	YDR371W	SRL3	P36167	246 aa		4.9	□□□□□ -1.63
CTS2	YDR371W	CIN4	P39110	191 aa		4.9	□□□□□ -1.63
CTS2	YDR371W	PHO90	P39535	881 aa		4.9	□□□□□ -1.63
CTS2	YDR371W	PFA3	P42836	336 aa		4.9	□□□□□ -1.63
CTS2	YDR371W	YJL016W	P47072	561 aa		4.9	□□□□□ -1.63
CTS2	YDR371W	UFD1	P53044	361 aa		4.9	□□□□□ -1.63
CTS2	YDR371W	USE1	P53146	245 aa		4.9	□□□□□ -1.63
CTS2	YDR371W	YMR178W	Q03219	274 aa	Known RBP	4.9	□□□□□ -1.63
CTS2	YDR371W	SIZ1	Q04195	904 aa		4.9	□□□□□ -1.63
CTS2	YDR371W	DLT1	Q04216	342 aa		4.9	□□□□□ -1.63
CTS2	YDR371W	SDH7	Q04401	133 aa		4.9	□□□□□ -1.63
CTS2	YDR371W	SEC13	Q04491	297 aa	Known RBP	4.9	□□□□□ -1.63
CTS2	YDR371W	HRD3	Q05787	833 aa		4.9	□□□□□ -1.63
CTS2	YDR371W	SGT1	Q08446	395 aa		4.9	□□□□□ -1.63
CTS2	YDR371W	YDR018C	Q12185	396 aa		4.9	□□□□□ -1.63
CTS2	YDR371W	YOR214C	Q12282	236 aa		4.9	□□□□□ -1.63
CTS2	YDR371W	YIR021W-A	Q3E739	70 aa		4.9	□□□□□ -1.63
CTS2	YDR371W	ECM3	Q99252	613 aa		4.9	□□□□□ -1.63
CTS2	YDR371W	IRA1	P18963	3092 aa		4.89	□□□□□ -1.63
CTS2	YDR371W	COR1	P07256	457 aa		4.89	□□□□□ -1.63
CTS2	YDR371W	CYS4	P32582	507 aa	Known RBP	4.89	□□□□□ -1.63
CTS2	YDR371W	BCS1	P32839	456 aa		4.89	□□□□□ -1.63
CTS2	YDR371W	PPZ2	P33329	710 aa		4.89	□□□□□ -1.63
CTS2	YDR371W	SOR1	P35497	357 aa	Known RBP	4.89	□□□□□ -1.63
CTS2	YDR371W	SPC34	P36131	295 aa		4.89	□□□□□ -1.63
CTS2	YDR371W	SDH8	P38345	138 aa		4.89	□□□□□ -1.63
CTS2	YDR371W	SPL2	P38839	148 aa		4.89	□□□□□ -1.63
CTS2	YDR371W	BDH2	P39713	417 aa		4.89	□□□□□ -1.63
CTS2	YDR371W	KTR5	P53966	522 aa	Predicted RBP	4.89	□□□□□ -1.63
CTS2	YDR371W	SLG1	P54867	378 aa		4.89	□□□□□ -1.63
CTS2	YDR371W	UBC7	Q02159	165 aa		4.89	□□□□□ -1.63
CTS2	YDR371W	YPL068C	Q02749	293 aa		4.89	□□□□□ -1.63
CTS2	YDR371W	MAK3	Q03503	176 aa		4.89	□□□□□ -1.63
CTS2	YDR371W	GRX8	Q05926	109 aa		4.89	□□□□□ -1.63
CTS2	YDR371W	ARC18	Q05933	178 aa	Known RBP	4.89	□□□□□ -1.63
CTS2	YDR371W	NOC4	Q06512	552 aa	Predicted RBP	4.89	□□□□□ -1.63
CTS2	YDR371W	SSK1	Q07084	712 aa		4.89	□□□□□ -1.63
CTS2	YDR371W	SOR2	Q07786	357 aa		4.89	□□□□□ -1.63
CTS2	YDR371W	LDS2	Q08218	356 aa		4.89	□□□□□ -1.63
CTS2	YDR371W	MLH3	Q12083	715 aa		4.89	□□□□□ -1.63
CTS2	YDR371W	RDI1	Q12434	202 aa		4.89	□□□□□ -1.63
CTS2	YDR371W	YDR524C-B	Q3E6R4	66 aa		4.89	□□□□□ -1.63
CTS2	YDR371W	PDR18	P53756	1333 aa		4.88	□□□□□ -1.63
CTS2	YDR371W	YPK1	P12688	680 aa	Known RBP	4.88	□□□□□ -1.63
CTS2	YDR371W	RSA4	P25382	515 aa	Known RBP	4.88	□□□□□ -1.63
CTS2	YDR371W	MXR2	P25566	168 aa		4.88	□□□□□ -1.63
CTS2	YDR371W	OCH1	P31755	480 aa		4.88	□□□□□ -1.63
CTS2	YDR371W	GRE3	P38715	327 aa	Known RBP RIP-Chip data	4.88	□□□□□ -1.63	not detected
CTS2	YDR371W	CTF8	P38877	133 aa		4.88	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 24.5 ms