RNA–Protein interactions for RNA: YDR335W

MSN5, Transcript of Karyopherin, yeastyeast

Gene MSN5, Length 3,675 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSN5YDR335W YLR036CQ07986 203 aa1.18□□□□□ -2.22
MSN5YDR335W YPL199CQ08954 240 aa1.18□□□□□ -2.22
MSN5YDR335W ORT1Q12375 292 aa1.18□□□□□ -2.22
MSN5YDR335W YPR064WQ12492 139 aa1.18□□□□□ -2.22
MSN5YDR335W COX2P00410 251 aa1.18□□□□□ -2.22
MSN5YDR335W PET54P10834 293 aa1.18□□□□□ -2.22
MSN5YDR335W CPT1P17898 393 aa1.18□□□□□ -2.22
MSN5YDR335W SCO1P23833 295 aa1.18□□□□□ -2.22
MSN5YDR335W RFA3P26755 122 aaKnown RBP1.18□□□□□ -2.22
MSN5YDR335W RAD5P32849 1169 aaPredicted RBP1.18□□□□□ -2.22
MSN5YDR335W SSO1P32867 290 aa1.18□□□□□ -2.22
MSN5YDR335W NDT80P38830 627 aa1.18□□□□□ -2.22
MSN5YDR335W YER121WP40076 114 aa1.18□□□□□ -2.22
MSN5YDR335W YFL040WP43562 540 aa1.18□□□□□ -2.22
MSN5YDR335W KEG1P43614 200 aa1.18□□□□□ -2.22
MSN5YDR335W MMS2P53152 137 aa1.18□□□□□ -2.22
MSN5YDR335W POP6P53218 158 aa1.18□□□□□ -2.22
MSN5YDR335W BIO4P53630 237 aa1.18□□□□□ -2.22
MSN5YDR335W NUP116Q02630 1113 aa1.18□□□□□ -2.22
MSN5YDR335W CSM3Q04659 317 aa1.18□□□□□ -2.22
MSN5YDR335W ORM2Q06144 216 aa1.18□□□□□ -2.22
MSN5YDR335W ATG17Q06410 417 aa1.18□□□□□ -2.22
MSN5YDR335W YPR147CQ06522 304 aaKnown RBP1.18□□□□□ -2.22
MSN5YDR335W BSP1Q06604 576 aa1.18□□□□□ -2.22
MSN5YDR335W YDL114WQ07530 308 aa1.18□□□□□ -2.22
MSN5YDR335W PEX11Q12462 236 aa1.18□□□□□ -2.22
MSN5YDR335W RAX2Q12465 1220 aa1.18□□□□□ -2.22
MSN5YDR335W GCY1P14065 312 aaKnown RBP RIP-Chip data1.18□□□□□ -2.22not detected
MSN5YDR335W SNT1P25357 1226 aa1.18□□□□□ -2.22
MSN5YDR335W EHD3P28817 500 aa1.18□□□□□ -2.22
MSN5YDR335W KAR9P32526 644 aa1.18□□□□□ -2.22
MSN5YDR335W PDC2P32896 925 aa1.18□□□□□ -2.22
MSN5YDR335W MRPL6P32904 214 aa1.18□□□□□ -2.22
MSN5YDR335W DER1P38307 211 aa1.18□□□□□ -2.22
MSN5YDR335W EGD2P38879 174 aaKnown RBP1.18□□□□□ -2.22
MSN5YDR335W SHO1P40073 367 aa1.18□□□□□ -2.22
MSN5YDR335W RRG9P40156 214 aa1.18□□□□□ -2.22
MSN5YDR335W YIL012WP40551 113 aa1.18□□□□□ -2.22
MSN5YDR335W AZF1P41696 914 aa1.18□□□□□ -2.22
MSN5YDR335W SLG1P54867 378 aa1.18□□□□□ -2.22
MSN5YDR335W YMR279CQ03263 540 aa1.18□□□□□ -2.22
MSN5YDR335W SPO77Q06134 477 aa1.18□□□□□ -2.22
MSN5YDR335W SFH1Q06168 426 aa1.18□□□□□ -2.22
MSN5YDR335W YAP7Q08182 245 aa1.18□□□□□ -2.22
MSN5YDR335W ATG34Q12292 412 aa1.18□□□□□ -2.22
MSN5YDR335W CSR2Q12734 1121 aa1.18□□□□□ -2.22
MSN5YDR335W TRP4P07285 380 aaPredicted RBP1.17□□□□□ -2.22
MSN5YDR335W SSC1P0CS90 654 aaKnown RBP1.17□□□□□ -2.22
MSN5YDR335W RPL12AP0CX53 165 aaKnown RBP1.17□□□□□ -2.22
MSN5YDR335W RPL12BP0CX54 165 aa1.17□□□□□ -2.22
MSN5YDR335W CAP2P13517 287 aa1.17□□□□□ -2.22
MSN5YDR335W CTA1P15202 515 aa1.17□□□□□ -2.22
MSN5YDR335W HEM15P16622 393 aa1.17□□□□□ -2.22
MSN5YDR335W DBF2P22204 572 aa1.17□□□□□ -2.22
MSN5YDR335W TAH1P25638 111 aaPredicted RBP1.17□□□□□ -2.22
MSN5YDR335W BUB3P26449 341 aa1.17□□□□□ -2.22
MSN5YDR335W CSE1P33307 960 aa1.17□□□□□ -2.22
MSN5YDR335W VPS21P36017 210 aaKnown RBP1.17□□□□□ -2.22
MSN5YDR335W JEN1P36035 616 aa1.17□□□□□ -2.22
MSN5YDR335W BMT2P38278 337 aa1.17□□□□□ -2.22
MSN5YDR335W SSH1P38353 490 aaKnown RBP1.17□□□□□ -2.22
MSN5YDR335W SBE22P38814 852 aa1.17□□□□□ -2.22
MSN5YDR335W YFL067WP43537 175 aa1.17□□□□□ -2.22
MSN5YDR335W YGR042WP53227 271 aa1.17□□□□□ -2.22
MSN5YDR335W SHY1P53266 389 aa1.17□□□□□ -2.22
MSN5YDR335W ATP23P53722 227 aa1.17□□□□□ -2.22
MSN5YDR335W CWC25P53854 179 aaKnown RBP1.17□□□□□ -2.22
MSN5YDR335W TDA7P53882 636 aaPredicted RBP1.17□□□□□ -2.22
MSN5YDR335W PIR3Q03180 325 aa1.17□□□□□ -2.22
MSN5YDR335W NUP53Q03790 475 aa1.17□□□□□ -2.22
MSN5YDR335W YET2Q04210 160 aa1.17□□□□□ -2.22
MSN5YDR335W YMR034CQ05131 434 aaPredicted RBP1.17□□□□□ -2.22
MSN5YDR335W NNT1Q05874 261 aa1.17□□□□□ -2.22
MSN5YDR335W YPR098CQ06089 161 aa1.17□□□□□ -2.22
MSN5YDR335W TAZ1Q06510 381 aa1.17□□□□□ -2.22
MSN5YDR335W NOC4Q06512 552 aaPredicted RBP1.17□□□□□ -2.22
MSN5YDR335W ENB1Q08299 606 aa1.17□□□□□ -2.22
MSN5YDR335W ABP140Q08641 628 aaKnown RBP1.17□□□□□ -2.22
MSN5YDR335W ESA1Q08649 445 aa1.17□□□□□ -2.22
MSN5YDR335W AKR2Q12013 749 aa1.17□□□□□ -2.22
MSN5YDR335W Q0010Q9ZZX9 128 aa1.17□□□□□ -2.22
MSN5YDR335W YMR316C-AI2HB70 103 aa1.17□□□□□ -2.22
MSN5YDR335W RPL7AP05737 244 aaKnown RBP1.17□□□□□ -2.22
MSN5YDR335W ADE5,7P07244 802 aaKnown RBP1.17□□□□□ -2.22
MSN5YDR335W ASP3-2P0CX77 362 aa1.17□□□□□ -2.22
MSN5YDR335W ASP3-3P0CX78 362 aa1.17□□□□□ -2.22
MSN5YDR335W ASP3-4P0CX79 362 aa1.17□□□□□ -2.22
MSN5YDR335W ASP3-1P0CZ17 362 aa1.17□□□□□ -2.22
MSN5YDR335W EXO70P19658 623 aa1.17□□□□□ -2.22
MSN5YDR335W MRPL20P22354 195 aaPredicted RBP1.17□□□□□ -2.22
MSN5YDR335W RPS2P25443 254 aaKnown RBP1.17□□□□□ -2.22
MSN5YDR335W BUB2P26448 306 aaPredicted RBP1.17□□□□□ -2.22
MSN5YDR335W MEI4P29467 408 aa1.17□□□□□ -2.22
MSN5YDR335W ACP1P32463 125 aa1.17□□□□□ -2.22
MSN5YDR335W UTR4P32626 227 aa1.17□□□□□ -2.22
MSN5YDR335W TRS65P32893 560 aa1.17□□□□□ -2.22
MSN5YDR335W TIR2P33890 251 aa1.17□□□□□ -2.22
MSN5YDR335W IKI1P38874 309 aa1.17□□□□□ -2.22
MSN5YDR335W PET100P38958 111 aa1.17□□□□□ -2.22
MSN5YDR335W CCT4P39078 528 aaKnown RBP1.17□□□□□ -2.22
Retrieved 100 of 5,963 RNA–protein pairs in 130.5 ms