RNA–Protein interactions for RNA: YDR240C

SNU56, Transcript of Component of U1 snRNP required for mRNA splicing via spliceosome, yeastyeast

Gene SNU56, Length 1,479 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNU56YDR240C YPC1P38298 316 aa1.49□□□□□ -2.17
SNU56YDR240C DAN1P47178 298 aa1.49□□□□□ -2.17
SNU56YDR240C MND1P53102 219 aa1.49□□□□□ -2.17
SNU56YDR240C SWT21P53873 357 aaPredicted RBP1.49□□□□□ -2.17
SNU56YDR240C YMR166CQ03829 368 aa1.49□□□□□ -2.17
SNU56YDR240C FCF1Q05498 189 aaPredicted RBP1.49□□□□□ -2.17
SNU56YDR240C SUE1Q06524 206 aa1.49□□□□□ -2.17
SNU56YDR240C SAM4Q08985 325 aaKnown RBP1.49□□□□□ -2.17
SNU56YDR240C NUP157P40064 1391 aaKnown RBP1.48□□□□□ -2.17
SNU56YDR240C PAN1P32521 1480 aa1.48□□□□□ -2.17
SNU56YDR240C AEP1P32493 518 aa1.48□□□□□ -2.17
SNU56YDR240C COY1P34237 679 aa1.48□□□□□ -2.17
SNU56YDR240C YJR146WP47174 117 aa1.48□□□□□ -2.17
SNU56YDR240C MRS2Q01926 470 aa1.48□□□□□ -2.17
SNU56YDR240C RDS3Q06835 107 aaPredicted RBP1.48□□□□□ -2.17
SNU56YDR240C RRP42Q12277 265 aaPredicted RBP1.48□□□□□ -2.17
SNU56YDR240C RPL31AP0C2H8 113 aaKnown RBP1.47□□□□□ -2.17
SNU56YDR240C RPE1P46969 238 aa1.47□□□□□ -2.17
SNU56YDR240C TPN1P53099 579 aa1.47□□□□□ -2.17
SNU56YDR240C GRH1Q04410 372 aaKnown RBP1.47□□□□□ -2.17
SNU56YDR240C STE23Q06010 1027 aa1.47□□□□□ -2.17
SNU56YDR240C CTS2Q06350 511 aa1.47□□□□□ -2.17
SNU56YDR240C APC9Q12107 265 aa1.47□□□□□ -2.17
SNU56YDR240C YPR064WQ12492 139 aa1.47□□□□□ -2.17
SNU56YDR240C ISD11Q6Q560 94 aa1.47□□□□□ -2.17
SNU56YDR240C FKS1P38631 1876 aaKnown RBP1.46□□□□□ -2.18
SNU56YDR240C RAD7P06779 565 aa1.46□□□□□ -2.18
SNU56YDR240C BMH1P29311 267 aaKnown RBP1.46□□□□□ -2.18
SNU56YDR240C YHI9P38765 294 aa1.46□□□□□ -2.18
SNU56YDR240C COG3P40094 801 aa1.46□□□□□ -2.18
SNU56YDR240C SHQ1P40486 507 aaPredicted RBP1.46□□□□□ -2.18
SNU56YDR240C MRPL49P40858 161 aaPredicted RBP1.46□□□□□ -2.18
SNU56YDR240C GDS1P41913 522 aa1.46□□□□□ -2.18
SNU56YDR240C YPT32P51996 222 aaKnown RBP1.46□□□□□ -2.18
SNU56YDR240C COS6P53344 381 aa1.46□□□□□ -2.18
SNU56YDR240C EMC6Q12431 108 aa1.46□□□□□ -2.18
SNU56YDR240C YPR1Q12458 312 aa1.46□□□□□ -2.18
SNU56YDR240C TDH1P00360 332 aaKnown RBP1.45□□□□□ -2.18
SNU56YDR240C APE4P38821 490 aa1.45□□□□□ -2.18
SNU56YDR240C NAS2P40555 220 aa1.45□□□□□ -2.18
SNU56YDR240C COX16P47081 118 aa1.45□□□□□ -2.18
SNU56YDR240C COG7P53195 279 aa1.45□□□□□ -2.18
SNU56YDR240C DCR2Q05924 578 aa1.45□□□□□ -2.18
SNU56YDR240C PBP4Q07362 185 aaKnown RBP1.45□□□□□ -2.18
SNU56YDR240C YEL009C-AA0A023PZF2 135 aa1.44□□□□□ -2.18
SNU56YDR240C CDC37P06101 506 aaKnown RBP1.44□□□□□ -2.18
SNU56YDR240C KRE6P32486 720 aa1.44□□□□□ -2.18
SNU56YDR240C SWC5P38326 303 aa1.44□□□□□ -2.18
SNU56YDR240C PHO89P38361 574 aa1.44□□□□□ -2.18
SNU56YDR240C GRE3P38715 327 aaKnown RBP RIP-Chip data1.44□□□□□ -2.18not detected
SNU56YDR240C SEN34P39707 275 aa1.44□□□□□ -2.18
SNU56YDR240C YML018CQ03730 393 aa1.44□□□□□ -2.18
SNU56YDR240C YOR268CQ08734 132 aa1.44□□□□□ -2.18
SNU56YDR240C YPL150WQ12152 901 aa1.44□□□□□ -2.18
SNU56YDR240C PET18P25362 215 aa1.43□□□□□ -2.18
SNU56YDR240C RPL5P26321 297 aaKnown RBP1.43□□□□□ -2.18
SNU56YDR240C ERG2P32352 222 aa1.43□□□□□ -2.18
SNU56YDR240C SMI1P32566 505 aa1.43□□□□□ -2.18
SNU56YDR240C SUA5P32579 426 aa1.43□□□□□ -2.18
SNU56YDR240C CAT2P32796 670 aaKnown RBP1.43□□□□□ -2.18
SNU56YDR240C AVT7P40501 490 aa1.43□□□□□ -2.18
SNU56YDR240C YJL016WP47072 561 aa1.43□□□□□ -2.18
SNU56YDR240C SLM2P53955 656 aa1.43□□□□□ -2.18
SNU56YDR240C CAB5Q03941 241 aa1.43□□□□□ -2.18
SNU56YDR240C TOM40P23644 387 aaKnown RBP1.43□□□□□ -2.18
SNU56YDR240C COT1P32798 439 aa1.43□□□□□ -2.18
SNU56YDR240C POP8P38208 133 aa1.43□□□□□ -2.18
SNU56YDR240C YHL026CP38740 315 aa1.43□□□□□ -2.18
SNU56YDR240C SPT8P38915 602 aa1.43□□□□□ -2.18
SNU56YDR240C FET3P38993 636 aa1.43□□□□□ -2.18
SNU56YDR240C LOH1P47055 219 aa1.43□□□□□ -2.18
SNU56YDR240C YPL077CQ02831 240 aa1.43□□□□□ -2.18
SNU56YDR240C EBS1Q03466 884 aaKnown RBP1.43□□□□□ -2.18
SNU56YDR240C PAA1Q12447 191 aaKnown RBP1.43□□□□□ -2.18
SNU56YDR240C SWD2P36104 329 aaPredicted RBP1.42□□□□□ -2.18
SNU56YDR240C RPC37P36121 282 aa1.42□□□□□ -2.18
SNU56YDR240C AIM20P40451 204 aa1.42□□□□□ -2.18
SNU56YDR240C CDC40P40968 455 aaPredicted RBP1.42□□□□□ -2.18
SNU56YDR240C DPP1Q05521 289 aa1.42□□□□□ -2.18
SNU56YDR240C TAZ1Q06510 381 aa1.42□□□□□ -2.18
SNU56YDR240C YOR114WQ12219 294 aa1.42□□□□□ -2.18
SNU56YDR240C YKL063CP35725 167 aa1.41□□□□□ -2.18
SNU56YDR240C DRE2P36152 348 aa1.41□□□□□ -2.18
SNU56YDR240C SSO2P39926 295 aa1.41□□□□□ -2.18
SNU56YDR240C FCY21P40039 528 aa1.41□□□□□ -2.18
SNU56YDR240C YMR209CQ03648 457 aa1.41□□□□□ -2.18
SNU56YDR240C MGR3Q04472 501 aa1.41□□□□□ -2.18
SNU56YDR240C YLR297WQ05899 129 aa1.41□□□□□ -2.18
SNU56YDR240C SIA1Q12212 622 aa1.41□□□□□ -2.18
SNU56YDR240C NOT5Q12514 560 aaPredicted RBP1.41□□□□□ -2.18
SNU56YDR240C YHR086W-AQ3E746 53 aa1.41□□□□□ -2.18
SNU56YDR240C TFS1P14306 219 aa1.4□□□□□ -2.19
SNU56YDR240C ATG15P25641 520 aa1.4□□□□□ -2.19
SNU56YDR240C END3P39013 349 aa1.4□□□□□ -2.19
SNU56YDR240C TIF34P40217 347 aaKnown RBP1.4□□□□□ -2.19
SNU56YDR240C YJL027CP47063 138 aaPredicted RBP1.4□□□□□ -2.19
SNU56YDR240C GTO1P48239 356 aa1.4□□□□□ -2.19
SNU56YDR240C CAB4P53332 305 aa1.4□□□□□ -2.19
SNU56YDR240C YPL039WQ03080 316 aa1.4□□□□□ -2.19
SNU56YDR240C VPS20Q04272 221 aa1.4□□□□□ -2.19
Retrieved 100 of 5,963 RNA–protein pairs in 44.4 ms