RNA–Protein interactions for RNA: YDR077W

SED1, Transcript of Major stress-induced structural GPI-cell wall glycoprotein, yeastyeast

Gene SED1, Length 1,017 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SED1YDR077W RTC5Q12108 567 aaKnown RBP8.52□□□□□ -1.05
SED1YDR077W HSP42Q12329 375 aa8.52□□□□□ -1.05
SED1YDR077W SWM1Q12379 170 aa8.52□□□□□ -1.05
SED1YDR077W GLT1Q12680 2145 aaKnown RBP8.52□□□□□ -1.05
SED1YDR077W MTR10Q99189 972 aa8.52□□□□□ -1.05
SED1YDR077W IRA2P19158 3079 aa8.51□□□□□ -1.05
SED1YDR077W SOD2P00447 233 aa8.51□□□□□ -1.05
SED1YDR077W MSW1P04803 379 aa8.51□□□□□ -1.05
SED1YDR077W RPS13P05756 151 aaKnown RBP8.51□□□□□ -1.05
SED1YDR077W RIP1P08067 215 aa8.51□□□□□ -1.05
SED1YDR077W PDX1P16451 410 aa8.51□□□□□ -1.05
SED1YDR077W ERG8P24521 451 aa8.51□□□□□ -1.05
SED1YDR077W NAM9P27929 486 aa8.51□□□□□ -1.05
SED1YDR077W SPT10P35208 640 aa8.51□□□□□ -1.05
SED1YDR077W OM14P38325 134 aa8.51□□□□□ -1.05
SED1YDR077W MID1P41821 548 aa8.51□□□□□ -1.05
SED1YDR077W NIT2P47016 307 aa8.51□□□□□ -1.05
SED1YDR077W RSM28Q03430 361 aa8.51□□□□□ -1.05
SED1YDR077W YMR130WQ04223 302 aa8.51□□□□□ -1.05
SED1YDR077W SYC1Q08553 188 aaPredicted RBP8.51□□□□□ -1.05
SED1YDR077W YAL064W-BO13512 126 aa8.5□□□□□ -1.05
SED1YDR077W HIS3P06633 220 aa8.5□□□□□ -1.05
SED1YDR077W PHO4P07270 312 aaKnown RBP8.5□□□□□ -1.05
SED1YDR077W RPL40AP0CH08 128 aaKnown RBP8.5□□□□□ -1.05
SED1YDR077W RPL40BP0CH09 128 aaKnown RBP8.5□□□□□ -1.05
SED1YDR077W PDA1P16387 420 aaKnown RBP8.5□□□□□ -1.05
SED1YDR077W DBF2P22204 572 aa8.5□□□□□ -1.05
SED1YDR077W LDB16P25587 256 aa8.5□□□□□ -1.05
SED1YDR077W YCR102CP25608 368 aa8.5□□□□□ -1.05
SED1YDR077W RPC34P32910 317 aa8.5□□□□□ -1.05
SED1YDR077W MSS4P38994 779 aa8.5□□□□□ -1.05
SED1YDR077W HPA3P39979 161 aa8.5□□□□□ -1.05
SED1YDR077W SHO1P40073 367 aa8.5□□□□□ -1.05
SED1YDR077W SLS1P42900 643 aa8.5□□□□□ -1.05
SED1YDR077W BNA6P43619 295 aa8.5□□□□□ -1.05
SED1YDR077W DPB11P47027 764 aaPredicted RBP8.5□□□□□ -1.05
SED1YDR077W YGL204CP53089 101 aa8.5□□□□□ -1.05
SED1YDR077W YGR066CP53242 292 aa8.5□□□□□ -1.05
SED1YDR077W PLB2Q03674 706 aa8.5□□□□□ -1.05
SED1YDR077W GIS1Q03833 894 aa8.5□□□□□ -1.05
SED1YDR077W RAX1Q08760 435 aa8.5□□□□□ -1.05
SED1YDR077W NIP7Q08962 181 aaKnown RBP8.5□□□□□ -1.05
SED1YDR077W MDM32Q12171 622 aa8.5□□□□□ -1.05
SED1YDR077W HMS1Q12398 434 aa8.5□□□□□ -1.05
SED1YDR077W OPI3P05375 206 aa8.49□□□□□ -1.05
SED1YDR077W YFR010W-AP0C5N0 62 aa8.49□□□□□ -1.05
SED1YDR077W SPO7P18410 259 aa8.49□□□□□ -1.05
SED1YDR077W STE18P18852 110 aa8.49□□□□□ -1.05
SED1YDR077W KRR1P25586 316 aaPredicted RBP8.49□□□□□ -1.05
SED1YDR077W CPR3P25719 182 aa8.49□□□□□ -1.05
SED1YDR077W NUD1P32336 851 aa8.49□□□□□ -1.05
SED1YDR077W HYM1P32464 399 aa8.49□□□□□ -1.05
SED1YDR077W KRE6P32486 720 aa8.49□□□□□ -1.05
SED1YDR077W APD1P38281 316 aa8.49□□□□□ -1.05
SED1YDR077W PTH1P38876 190 aaKnown RBP8.49□□□□□ -1.05
SED1YDR077W YER158CP40095 573 aa8.49□□□□□ -1.05
SED1YDR077W YKE4P40544 346 aa8.49□□□□□ -1.05
SED1YDR077W ECO1P43605 281 aa8.49□□□□□ -1.05
SED1YDR077W YJR120WP47157 116 aa8.49□□□□□ -1.05
SED1YDR077W LSM7P53905 115 aaKnown RBP8.49□□□□□ -1.05
SED1YDR077W SDC1Q03323 175 aa8.49□□□□□ -1.05
SED1YDR077W VBA4Q04602 768 aaKnown RBP8.49□□□□□ -1.05
SED1YDR077W MIM1Q08176 113 aa8.49□□□□□ -1.05
SED1YDR077W NOP56Q12460 504 aaKnown RBP RIP-Chip data8.49□□□□□ -1.05not detected
SED1YDR077W CYC1P00044 109 aaPredicted RBP8.48□□□□□ -1.05
SED1YDR077W GPM1P00950 247 aaKnown RBP8.48□□□□□ -1.05
SED1YDR077W CAM1P29547 415 aaKnown RBP8.48□□□□□ -1.05
SED1YDR077W ERG9P29704 444 aa8.48□□□□□ -1.05
SED1YDR077W PRE4P30657 266 aa8.48□□□□□ -1.05
SED1YDR077W THI4P32318 326 aa8.48□□□□□ -1.05
SED1YDR077W MCM10P32354 571 aa8.48□□□□□ -1.05
SED1YDR077W PDR3P33200 976 aa8.48□□□□□ -1.05
SED1YDR077W SRL3P36167 246 aa8.48□□□□□ -1.05
SED1YDR077W SDS24P38314 527 aa8.48□□□□□ -1.05
SED1YDR077W HTD2P38790 280 aaKnown RBP8.48□□□□□ -1.05
SED1YDR077W LYS5P50113 272 aa8.48□□□□□ -1.05
SED1YDR077W MTM1P53320 366 aa8.48□□□□□ -1.05
SED1YDR077W PET191Q02772 108 aa8.48□□□□□ -1.05
SED1YDR077W YDR209CQ03480 137 aa8.48□□□□□ -1.05
SED1YDR077W NNT1Q05874 261 aa8.48□□□□□ -1.05
SED1YDR077W PEX30Q06169 523 aa8.48□□□□□ -1.05
SED1YDR077W SSK1Q07084 712 aa8.48□□□□□ -1.05
SED1YDR077W SCM3Q12334 223 aa8.48□□□□□ -1.05
SED1YDR077W UTR1P21373 530 aa8.47□□□□□ -1.05
SED1YDR077W MEK1P24719 497 aaPredicted RBP8.47□□□□□ -1.05
SED1YDR077W RCN1P36054 211 aa8.47□□□□□ -1.05
SED1YDR077W SER3P40054 469 aa8.47□□□□□ -1.05
SED1YDR077W RFC4P40339 323 aaKnown RBP8.47□□□□□ -1.05
SED1YDR077W LYS20P48570 428 aaKnown RBP8.47□□□□□ -1.05
SED1YDR077W BSC5P53755 489 aa8.47□□□□□ -1.05
SED1YDR077W ASI3P53983 676 aa8.47□□□□□ -1.05
SED1YDR077W MRPL13Q02204 264 aa8.47□□□□□ -1.05
SED1YDR077W NMA1Q06178 401 aaKnown RBP8.47□□□□□ -1.05
SED1YDR077W CTS2Q06350 511 aa8.47□□□□□ -1.05
SED1YDR077W PHO92Q06390 306 aa8.47□□□□□ -1.05
SED1YDR077W LYS21Q12122 440 aaKnown RBP8.47□□□□□ -1.05
SED1YDR077W PUP1P25043 261 aa8.46□□□□□ -1.06
SED1YDR077W ERG24P32462 438 aaKnown RBP8.46□□□□□ -1.06
SED1YDR077W COS9P36034 407 aa8.46□□□□□ -1.06
SED1YDR077W YBR242WP38331 238 aa8.46□□□□□ -1.06
Retrieved 100 of 5,963 RNA–protein pairs in 17.1 ms