RNA–Protein interactions for RNA: YDR007W

TRP1, Transcript of Phosphoribosylanthranilate isomerase, yeast

Gene TRP1, Length 675 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TRP1	YDR007W	HPR1	P17629	752 aa	Known RBP	5.23	□□□□□ -1.57
TRP1	YDR007W	GRX2	P17695	143 aa	Known RBP	5.23	□□□□□ -1.57
TRP1	YDR007W	ATP7	P30902	174 aa		5.23	□□□□□ -1.57
TRP1	YDR007W	JEN1	P36035	616 aa		5.23	□□□□□ -1.57
TRP1	YDR007W	POP4	P38336	279 aa		5.23	□□□□□ -1.57
TRP1	YDR007W	HIS2	P38635	335 aa		5.23	□□□□□ -1.57
TRP1	YDR007W	ALP1	P38971	573 aa		5.23	□□□□□ -1.57
TRP1	YDR007W	END3	P39013	349 aa		5.23	□□□□□ -1.57
TRP1	YDR007W	SPG5	P42933	373 aa		5.23	□□□□□ -1.57
TRP1	YDR007W	AGP3	P43548	558 aa		5.23	□□□□□ -1.57
TRP1	YDR007W	YJR030C	P47101	745 aa		5.23	□□□□□ -1.57
TRP1	YDR007W	HSH155	P49955	971 aa	Known RBP	5.23	□□□□□ -1.57
TRP1	YDR007W	YGL114W	P53134	725 aa		5.23	□□□□□ -1.57
TRP1	YDR007W	YGR117C	P53270	476 aa		5.23	□□□□□ -1.57
TRP1	YDR007W	YNL146W	P53906	100 aa		5.23	□□□□□ -1.57
TRP1	YDR007W	ARL3	Q02804	198 aa		5.23	□□□□□ -1.57
TRP1	YDR007W	YOL075C	Q08234	1294 aa		5.23	□□□□□ -1.57
TRP1	YDR007W	RPN6	Q12377	434 aa		5.23	□□□□□ -1.57
TRP1	YDR007W	FSH3	Q99369	266 aa		5.23	□□□□□ -1.57
TRP1	YDR007W	DBR1	P24309	405 aa	Known RBP	5.22	□□□□□ -1.57
TRP1	YDR007W	YCL068C	P25593	260 aa		5.22	□□□□□ -1.57
TRP1	YDR007W	NAM9	P27929	486 aa		5.22	□□□□□ -1.57
TRP1	YDR007W	KRE6	P32486	720 aa		5.22	□□□□□ -1.57
TRP1	YDR007W	SIM1	P40472	476 aa		5.22	□□□□□ -1.57
TRP1	YDR007W	LYS12	P40495	371 aa	Known RBP	5.22	□□□□□ -1.57
TRP1	YDR007W	OST1	P41543	476 aa	Known RBP	5.22	□□□□□ -1.57
TRP1	YDR007W	YJL016W	P47072	561 aa		5.22	□□□□□ -1.57
TRP1	YDR007W	TOS2	P50078	622 aa		5.22	□□□□□ -1.57
TRP1	YDR007W	GET1	P53192	235 aa		5.22	□□□□□ -1.57
TRP1	YDR007W	FMP48	P53233	369 aa		5.22	□□□□□ -1.57
TRP1	YDR007W	HHO1	P53551	258 aa		5.22	□□□□□ -1.57
TRP1	YDR007W	RCF2	P53721	224 aa		5.22	□□□□□ -1.57
TRP1	YDR007W	CCE1	Q03702	353 aa		5.22	□□□□□ -1.57
TRP1	YDR007W	SNX41	Q04053	625 aa		5.22	□□□□□ -1.57
TRP1	YDR007W	AIM33	Q04516	312 aa		5.22	□□□□□ -1.57
TRP1	YDR007W	APC4	Q04601	652 aa		5.22	□□□□□ -1.57
TRP1	YDR007W	BCH1	Q05029	724 aa		5.22	□□□□□ -1.57
TRP1	YDR007W	YLR297W	Q05899	129 aa		5.22	□□□□□ -1.57
TRP1	YDR007W	MHR1	Q06630	226 aa		5.22	□□□□□ -1.57
TRP1	YDR007W	RGT2	Q12300	763 aa		5.22	□□□□□ -1.57
TRP1	YDR007W	DGK1	Q12382	290 aa		5.22	□□□□□ -1.57
TRP1	YDR007W	YOP1	Q12402	180 aa		5.22	□□□□□ -1.57
TRP1	YDR007W	CBF1	P17106	351 aa		5.21	□□□□□ -1.58
TRP1	YDR007W	GIT1	P25346	518 aa		5.21	□□□□□ -1.58
TRP1	YDR007W	PET18	P25362	215 aa		5.21	□□□□□ -1.58
TRP1	YDR007W	VMA5	P31412	392 aa	Known RBP	5.21	□□□□□ -1.58
TRP1	YDR007W	SKG1	P36169	355 aa		5.21	□□□□□ -1.58
TRP1	YDR007W	MRPL3	P36516	390 aa		5.21	□□□□□ -1.58
TRP1	YDR007W	EGD2	P38879	174 aa	Known RBP	5.21	□□□□□ -1.58
TRP1	YDR007W	YER184C	P39961	794 aa		5.21	□□□□□ -1.58
TRP1	YDR007W	YHC3	P47040	408 aa		5.21	□□□□□ -1.58
TRP1	YDR007W	IRC18	P47056	224 aa		5.21	□□□□□ -1.58
TRP1	YDR007W	IBD2	P53892	351 aa		5.21	□□□□□ -1.58
TRP1	YDR007W	ENT5	Q03769	411 aa	Known RBP	5.21	□□□□□ -1.58
TRP1	YDR007W	MSC3	Q05812	728 aa		5.21	□□□□□ -1.58
TRP1	YDR007W	FKS3	Q04952	1785 aa		5.2	□□□□□ -1.58
TRP1	YDR007W	RHO1	P06780	209 aa	Known RBP	5.2	□□□□□ -1.58
TRP1	YDR007W	YCR101C	P25607	182 aa		5.2	□□□□□ -1.58
TRP1	YDR007W	MRPL37	P36532	105 aa		5.2	□□□□□ -1.58
TRP1	YDR007W	CHK1	P38147	527 aa		5.2	□□□□□ -1.58
TRP1	YDR007W	MIX23	P38162	196 aa		5.2	□□□□□ -1.58
TRP1	YDR007W	IPI1	P38803	334 aa	Predicted RBP	5.2	□□□□□ -1.58
TRP1	YDR007W	BIG1	P38813	335 aa		5.2	□□□□□ -1.58
TRP1	YDR007W	YHR122W	P38829	231 aa		5.2	□□□□□ -1.58
TRP1	YDR007W	FHL1	P39521	936 aa		5.2	□□□□□ -1.58
TRP1	YDR007W	PRP39	P39682	629 aa	Known RBP	5.2	□□□□□ -1.58
TRP1	YDR007W	ERG10	P41338	398 aa	Known RBP	5.2	□□□□□ -1.58
TRP1	YDR007W	TPN1	P53099	579 aa		5.2	□□□□□ -1.58
TRP1	YDR007W	LAP3	Q01532	483 aa	Known RBP RIP-Chip data	5.2	□□□□□ -1.58	not detected
TRP1	YDR007W	CWC27	Q02770	301 aa		5.2	□□□□□ -1.58
TRP1	YDR007W	GMC2	Q06201	188 aa		5.2	□□□□□ -1.58
TRP1	YDR007W	AKR2	Q12013	749 aa		5.2	□□□□□ -1.58
TRP1	YDR007W	ATP14	Q12349	124 aa		5.2	□□□□□ -1.58
TRP1	YDR007W	BCY1	P07278	416 aa	Known RBP	5.19	□□□□□ -1.58
TRP1	YDR007W	YLL053C	P0CD98	152 aa		5.19	□□□□□ -1.58
TRP1	YDR007W	ZWF1	P11412	505 aa	Known RBP	5.19	□□□□□ -1.58
TRP1	YDR007W	MAS2	P11914	482 aa		5.19	□□□□□ -1.58
TRP1	YDR007W	CPR1	P14832	162 aa	Known RBP	5.19	□□□□□ -1.58
TRP1	YDR007W	APA2	P22108	325 aa		5.19	□□□□□ -1.58
TRP1	YDR007W	EXG1	P23776	448 aa	Known RBP	5.19	□□□□□ -1.58
TRP1	YDR007W	YEF1	P32622	495 aa		5.19	□□□□□ -1.58
TRP1	YDR007W	TOA2	P32774	122 aa		5.19	□□□□□ -1.58
TRP1	YDR007W	CDC13	P32797	924 aa	Known RBP	5.19	□□□□□ -1.58
TRP1	YDR007W	MRP4	P32902	394 aa		5.19	□□□□□ -1.58
TRP1	YDR007W	DED81	P38707	554 aa	Known RBP	5.19	□□□□□ -1.58
TRP1	YDR007W	COS8	P38723	381 aa		5.19	□□□□□ -1.58
TRP1	YDR007W	PTI1	P39927	425 aa	Predicted RBP	5.19	□□□□□ -1.58
TRP1	YDR007W	BUD13	P46947	266 aa	Predicted RBP	5.19	□□□□□ -1.58
TRP1	YDR007W	CPR7	P47103	393 aa		5.19	□□□□□ -1.58
TRP1	YDR007W	ABM1	P47146	123 aa		5.19	□□□□□ -1.58
TRP1	YDR007W	YGR026W	P53217	278 aa		5.19	□□□□□ -1.58
TRP1	YDR007W	MNT4	P53745	580 aa		5.19	□□□□□ -1.58
TRP1	YDR007W	HXT11	P54862	567 aa		5.19	□□□□□ -1.58
TRP1	YDR007W	TDA1	Q03533	586 aa		5.19	□□□□□ -1.58
TRP1	YDR007W	TVP15	Q03860	143 aa		5.19	□□□□□ -1.58
TRP1	YDR007W	CSN9	Q03981	162 aa		5.19	□□□□□ -1.58
TRP1	YDR007W	NEJ1	Q06148	342 aa		5.19	□□□□□ -1.58
TRP1	YDR007W	GRS2	Q06817	618 aa		5.19	□□□□□ -1.58
TRP1	YDR007W	AIM45	Q12480	344 aa	Known RBP	5.19	□□□□□ -1.58
TRP1	YDR007W	YIL177C	P40434	1758 aa		5.19	□□□□□ -1.58

Retrieved 100 of 5,963 RNA–protein pairs in 20.2 ms