RNA–Protein interactions for RNA: YDL128W

VCX1, Transcript of Vacuolar membrane antiporter with Ca2+/H+ and K+/H+ exchange activity, yeast

Gene VCX1, Length 1,236 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VCX1	YDL128W	COG7	P53195	279 aa		5.09	□□□□□ -1.59
VCX1	YDL128W	PBP1	P53297	722 aa	Known RBP	5.09	□□□□□ -1.59
VCX1	YDL128W	RSM27	P53305	110 aa		5.09	□□□□□ -1.59
VCX1	YDL128W	TRM112	P53738	135 aa	Predicted RBP	5.09	□□□□□ -1.59
VCX1	YDL128W	FRE4	P53746	719 aa		5.09	□□□□□ -1.59
VCX1	YDL128W	YNL134C	P53912	376 aa	Known RBP	5.09	□□□□□ -1.59
VCX1	YDL128W	LAP3	Q01532	483 aa	Known RBP RIP-Chip data	5.09	□□□□□ -1.59	not detected
VCX1	YDL128W	MRPS17	Q03246	237 aa	Predicted RBP	5.09	□□□□□ -1.59
VCX1	YDL128W	RCR2	Q03446	210 aa	Known RBP	5.09	□□□□□ -1.59
VCX1	YDL128W	YDR387C	Q04162	555 aa		5.09	□□□□□ -1.59
VCX1	YDL128W	YMR252C	Q04814	134 aa		5.09	□□□□□ -1.59
VCX1	YDL128W	NOC4	Q06512	552 aa	Predicted RBP	5.09	□□□□□ -1.59
VCX1	YDL128W	DCI1	Q08558	271 aa		5.09	□□□□□ -1.59
VCX1	YDL128W	NDD1	Q08887	554 aa		5.09	□□□□□ -1.59
VCX1	YDL128W	RAD28	Q12021	506 aa		5.09	□□□□□ -1.59
VCX1	YDL128W	YPR011C	Q12251	326 aa		5.09	□□□□□ -1.59
VCX1	YDL128W	NDJ1	Q12366	352 aa		5.09	□□□□□ -1.59
VCX1	YDL128W	FRE6	Q12473	712 aa		5.09	□□□□□ -1.59
VCX1	YDL128W	LEU4	P06208	619 aa	Known RBP	5.08	□□□□□ -1.6
VCX1	YDL128W	PHO2	P07269	559 aa		5.08	□□□□□ -1.6
VCX1	YDL128W	RPB3	P16370	318 aa	Known RBP	5.08	□□□□□ -1.6
VCX1	YDL128W	SEC59	P20048	519 aa		5.08	□□□□□ -1.6
VCX1	YDL128W	MIH1	P23748	554 aa		5.08	□□□□□ -1.6
VCX1	YDL128W	VMA16	P23968	213 aa		5.08	□□□□□ -1.6
VCX1	YDL128W	SLM5	P25345	492 aa	Known RBP	5.08	□□□□□ -1.6
VCX1	YDL128W	RPD3	P32561	433 aa		5.08	□□□□□ -1.6
VCX1	YDL128W	PAU2	P32612	120 aa		5.08	□□□□□ -1.6
VCX1	YDL128W	SOL2	P37262	315 aa		5.08	□□□□□ -1.6
VCX1	YDL128W	THI2	P38141	450 aa		5.08	□□□□□ -1.6
VCX1	YDL128W	YBR184W	P38299	523 aa		5.08	□□□□□ -1.6
VCX1	YDL128W	PTH1	P38876	190 aa	Known RBP	5.08	□□□□□ -1.6
VCX1	YDL128W	PNT1	P38969	423 aa		5.08	□□□□□ -1.6
VCX1	YDL128W	EMC5	P40540	141 aa		5.08	□□□□□ -1.6
VCX1	YDL128W	VMA21	P41806	77 aa		5.08	□□□□□ -1.6
VCX1	YDL128W	SIP4	P46954	829 aa		5.08	□□□□□ -1.6
VCX1	YDL128W	YHC3	P47040	408 aa		5.08	□□□□□ -1.6
VCX1	YDL128W	IBA57	P47158	497 aa		5.08	□□□□□ -1.6
VCX1	YDL128W	DAN1	P47178	298 aa		5.08	□□□□□ -1.6
VCX1	YDL128W	SCS3	P53012	380 aa		5.08	□□□□□ -1.6
VCX1	YDL128W	YGR015C	P53208	328 aa		5.08	□□□□□ -1.6
VCX1	YDL128W	YGR079W	P53249	370 aa		5.08	□□□□□ -1.6
VCX1	YDL128W	HLR1	Q04429	423 aa		5.08	□□□□□ -1.6
VCX1	YDL128W	SMA2	Q04658	369 aa		5.08	□□□□□ -1.6
VCX1	YDL128W	YMR315W	Q04869	349 aa	Known RBP	5.08	□□□□□ -1.6
VCX1	YDL128W	BOP2	Q06150	570 aa		5.08	□□□□□ -1.6
VCX1	YDL128W	PEX30	Q06169	523 aa		5.08	□□□□□ -1.6
VCX1	YDL128W	CYK3	Q07533	885 aa		5.08	□□□□□ -1.6
VCX1	YDL128W	VTS1	Q08831	523 aa	Known RBP RIP-Chip data	5.08	□□□□□ -1.6	not detected
VCX1	YDL128W	YJR112W-A	Q3E743	109 aa		5.08	□□□□□ -1.6
VCX1	YDL128W	YGR161W-C	Q3E744	92 aa		5.08	□□□□□ -1.6
VCX1	YDL128W	HAP2	P06774	265 aa		5.07	□□□□□ -1.6
VCX1	YDL128W	UBI4	P0CG63	381 aa	Known RBP	5.07	□□□□□ -1.6
VCX1	YDL128W	RPL40A	P0CH08	128 aa	Known RBP	5.07	□□□□□ -1.6
VCX1	YDL128W	RPL40B	P0CH09	128 aa	Known RBP	5.07	□□□□□ -1.6
VCX1	YDL128W	MRP1	P10662	321 aa	Known RBP	5.07	□□□□□ -1.6
VCX1	YDL128W	POX1	P13711	748 aa		5.07	□□□□□ -1.6
VCX1	YDL128W	YPK2	P18961	677 aa		5.07	□□□□□ -1.6
VCX1	YDL128W	MRPL8	P22353	238 aa		5.07	□□□□□ -1.6
VCX1	YDL128W	POF1	P25576	258 aa		5.07	□□□□□ -1.6
VCX1	YDL128W	CDC50	P25656	391 aa		5.07	□□□□□ -1.6
VCX1	YDL128W	IDH2	P28241	369 aa	Known RBP	5.07	□□□□□ -1.6
VCX1	YDL128W	HXT4	P32467	576 aa		5.07	□□□□□ -1.6
VCX1	YDL128W	MKK1	P32490	508 aa		5.07	□□□□□ -1.6
VCX1	YDL128W	EMC3	P36039	253 aa		5.07	□□□□□ -1.6
VCX1	YDL128W	SDH4	P37298	181 aa		5.07	□□□□□ -1.6
VCX1	YDL128W	AXL2	P38928	823 aa		5.07	□□□□□ -1.6
VCX1	YDL128W	NIT2	P47016	307 aa		5.07	□□□□□ -1.6
VCX1	YDL128W	UBX6	P47049	396 aa		5.07	□□□□□ -1.6
VCX1	YDL128W	LYS20	P48570	428 aa	Known RBP	5.07	□□□□□ -1.6
VCX1	YDL128W	MNN10	P50108	393 aa	Known RBP	5.07	□□□□□ -1.6
VCX1	YDL128W	MDM34	P53083	459 aa		5.07	□□□□□ -1.6
VCX1	YDL128W	YGL117W	P53133	265 aa		5.07	□□□□□ -1.6
VCX1	YDL128W	TIM21	P53220	239 aa		5.07	□□□□□ -1.6
VCX1	YDL128W	MEP3	P53390	489 aa		5.07	□□□□□ -1.6
VCX1	YDL128W	HCH1	P53834	153 aa		5.07	□□□□□ -1.6
VCX1	YDL128W	PGA1	P53896	198 aa		5.07	□□□□□ -1.6
VCX1	YDL128W	GPI15	P53961	229 aa		5.07	□□□□□ -1.6
VCX1	YDL128W	PIR3	Q03180	325 aa		5.07	□□□□□ -1.6
VCX1	YDL128W	FIT1	Q04433	528 aa		5.07	□□□□□ -1.6
VCX1	YDL128W	SWF1	Q04629	336 aa		5.07	□□□□□ -1.6
VCX1	YDL128W	ECM22	Q05958	814 aa	Predicted RBP	5.07	□□□□□ -1.6
VCX1	YDL128W	CRT10	Q08226	957 aa		5.07	□□□□□ -1.6
VCX1	YDL128W	SKS1	Q12505	502 aa		5.07	□□□□□ -1.6
VCX1	YDL128W	SET6	Q12529	373 aa		5.07	□□□□□ -1.6
VCX1	YDL128W	YDL007C-A	Q2V2Q0	85 aa		5.07	□□□□□ -1.6
VCX1	YDL128W	TFB5	Q3E7C1	72 aa	Predicted RBP	5.07	□□□□□ -1.6
VCX1	YDL128W	YML003W	P0CF16	290 aa		5.06	□□□□□ -1.6
VCX1	YDL128W	SST2	P11972	698 aa	Known RBP	5.06	□□□□□ -1.6
VCX1	YDL128W	EPT1	P22140	391 aa		5.06	□□□□□ -1.6
VCX1	YDL128W	FAA1	P30624	700 aa	Known RBP	5.06	□□□□□ -1.6
VCX1	YDL128W	NTH1	P32356	751 aa		5.06	□□□□□ -1.6
VCX1	YDL128W	CSE2	P33308	149 aa		5.06	□□□□□ -1.6
VCX1	YDL128W	PHO11	P35842	467 aa		5.06	□□□□□ -1.6
VCX1	YDL128W	MRPL4	P36517	319 aa		5.06	□□□□□ -1.6
VCX1	YDL128W	SRO77	P38163	1010 aa		5.06	□□□□□ -1.6
VCX1	YDL128W	PHO12	P38693	467 aa		5.06	□□□□□ -1.6
VCX1	YDL128W	YEL073C	P39974	107 aa		5.06	□□□□□ -1.6
VCX1	YDL128W	MXR1	P40029	184 aa		5.06	□□□□□ -1.6
VCX1	YDL128W	FAU1	P40099	211 aa		5.06	□□□□□ -1.6
VCX1	YDL128W	SDP1	P40479	209 aa		5.06	□□□□□ -1.6

Retrieved 100 of 5,963 RNA–protein pairs in 9.1 ms