RNA–Protein interactions for RNA: YCL051W

LRE1, Transcript of Protein involved in control of cell wall structure and stress response, yeast

Gene LRE1, Length 1,752 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LRE1	YCL051W	APE1	P14904	514 aa		1.72	□□□□□ -2.13
LRE1	YCL051W	CKA1	P15790	372 aa		1.72	□□□□□ -2.13
LRE1	YCL051W	RPB3	P16370	318 aa	Known RBP	1.72	□□□□□ -2.13
LRE1	YCL051W	IDP1	P21954	428 aa	Known RBP	1.72	□□□□□ -2.13
LRE1	YCL051W	ATG15	P25641	520 aa		1.72	□□□□□ -2.13
LRE1	YCL051W	BUB3	P26449	341 aa		1.72	□□□□□ -2.13
LRE1	YCL051W	ADE1	P27616	306 aa		1.72	□□□□□ -2.13
LRE1	YCL051W	SUA5	P32579	426 aa		1.72	□□□□□ -2.13
LRE1	YCL051W	MUD1	P32605	298 aa	Known RBP	1.72	□□□□□ -2.13
LRE1	YCL051W	UGX2	P32772	223 aa		1.72	□□□□□ -2.13
LRE1	YCL051W	PDC2	P32896	925 aa		1.72	□□□□□ -2.13
LRE1	YCL051W	ZRT3	P34240	503 aa		1.72	□□□□□ -2.13
LRE1	YCL051W	FRE2	P36033	711 aa		1.72	□□□□□ -2.13
LRE1	YCL051W	TUL1	P36096	758 aa		1.72	□□□□□ -2.13
LRE1	YCL051W	TCD2	P36101	447 aa	Known RBP	1.72	□□□□□ -2.13
LRE1	YCL051W	ICS2	P38284	255 aa		1.72	□□□□□ -2.13
LRE1	YCL051W	MBA1	P38300	278 aa		1.72	□□□□□ -2.13
LRE1	YCL051W	HIS2	P38635	335 aa		1.72	□□□□□ -2.13
LRE1	YCL051W	PRS3	P38689	320 aa	Known RBP	1.72	□□□□□ -2.13
LRE1	YCL051W	GEP4	P38812	185 aa		1.72	□□□□□ -2.13
LRE1	YCL051W	WSS1	P38838	269 aa		1.72	□□□□□ -2.13
LRE1	YCL051W	FET3	P38993	636 aa		1.72	□□□□□ -2.13
LRE1	YCL051W	COG3	P40094	801 aa		1.72	□□□□□ -2.13
LRE1	YCL051W	VRG4	P40107	337 aa		1.72	□□□□□ -2.13
LRE1	YCL051W	PGD1	P40356	397 aa		1.72	□□□□□ -2.13
LRE1	YCL051W	YIL152W	P40455	235 aa		1.72	□□□□□ -2.13
LRE1	YCL051W	ALK1	P43633	760 aa	Known RBP	1.72	□□□□□ -2.13
LRE1	YCL051W	ASG7	P46993	209 aa		1.72	□□□□□ -2.13
LRE1	YCL051W	NIT2	P47016	307 aa		1.72	□□□□□ -2.13
LRE1	YCL051W	YJR011C	P47086	261 aa	Predicted RBP	1.72	□□□□□ -2.13
LRE1	YCL051W	YJR120W	P47157	116 aa		1.72	□□□□□ -2.13
LRE1	YCL051W	YGL185C	P53100	379 aa		1.72	□□□□□ -2.13
LRE1	YCL051W	FLC3	P53121	802 aa		1.72	□□□□□ -2.13
LRE1	YCL051W	SGF73	P53165	657 aa		1.72	□□□□□ -2.13
LRE1	YCL051W	NQM1	P53228	333 aa	Predicted RBP	1.72	□□□□□ -2.13
LRE1	YCL051W	NRK1	P53915	240 aa		1.72	□□□□□ -2.13
LRE1	YCL051W	PRP38	Q00723	242 aa	Predicted RBP	1.72	□□□□□ -2.13
LRE1	YCL051W	NUP116	Q02630	1113 aa		1.72	□□□□□ -2.13
LRE1	YCL051W	CTL1	Q03220	320 aa	Known RBP	1.72	□□□□□ -2.13
LRE1	YCL051W	CGI121	Q03705	181 aa	Known RBP	1.72	□□□□□ -2.13
LRE1	YCL051W	YDR124W	Q04608	324 aa		1.72	□□□□□ -2.13
LRE1	YCL051W	TPO3	Q06451	622 aa		1.72	□□□□□ -2.13
LRE1	YCL051W	MRPL35	Q06678	367 aa		1.72	□□□□□ -2.13
LRE1	YCL051W	BER1	Q06688	274 aa	Known RBP	1.72	□□□□□ -2.13
LRE1	YCL051W	STP4	Q07351	490 aa		1.72	□□□□□ -2.13
LRE1	YCL051W	AAD15	Q08361	143 aa		1.72	□□□□□ -2.13
LRE1	YCL051W	FDH1	Q08911	376 aa		1.72	□□□□□ -2.13
LRE1	YCL051W	PKH2	Q12236	1081 aa	Known RBP	1.72	□□□□□ -2.13
LRE1	YCL051W	LCB4	Q12246	624 aa		1.72	□□□□□ -2.13
LRE1	YCL051W	YLR108C	Q12259	485 aa		1.72	□□□□□ -2.13
LRE1	YCL051W	JLP1	Q12358	412 aa		1.72	□□□□□ -2.13
LRE1	YCL051W	ERP3	Q12403	225 aa		1.72	□□□□□ -2.13
LRE1	YCL051W	SPE4	Q12455	300 aa		1.72	□□□□□ -2.13
LRE1	YCL051W	YDR034W-B	Q6Q5X2	51 aa		1.72	□□□□□ -2.13
LRE1	YCL051W	PET20	Q99373	253 aa		1.72	□□□□□ -2.13
LRE1	YCL051W	NUM1	Q00402	2748 aa		1.71	□□□□□ -2.14
LRE1	YCL051W	STE2	D6VTK4	431 aa		1.71	□□□□□ -2.14
LRE1	YCL051W	COX2	P00410	251 aa		1.71	□□□□□ -2.14
LRE1	YCL051W	HAP2	P06774	265 aa		1.71	□□□□□ -2.14
LRE1	YCL051W	RHO2	P06781	192 aa		1.71	□□□□□ -2.14
LRE1	YCL051W	SPS2	P08459	502 aa		1.71	□□□□□ -2.14
LRE1	YCL051W	DDI2	P0CH63	225 aa		1.71	□□□□□ -2.14
LRE1	YCL051W	DDI3	P0CH64	225 aa		1.71	□□□□□ -2.14
LRE1	YCL051W	ACO1	P19414	778 aa	Known RBP RIP-Chip data	1.71	□□□□□ -2.14	not detected
LRE1	YCL051W	MAG1	P22134	296 aa	Known RBP	1.71	□□□□□ -2.14
LRE1	YCL051W	GRR1	P24814	1151 aa		1.71	□□□□□ -2.14
LRE1	YCL051W	BOS1	P25385	244 aa		1.71	□□□□□ -2.14
LRE1	YCL051W	GEX1	P25596	615 aa		1.71	□□□□□ -2.14
LRE1	YCL051W	STP22	P25604	385 aa		1.71	□□□□□ -2.14
LRE1	YCL051W	MGT1	P26188	188 aa		1.71	□□□□□ -2.14
LRE1	YCL051W	COS9	P36034	407 aa		1.71	□□□□□ -2.14
LRE1	YCL051W	FMP46	P36141	133 aa	Known RBP	1.71	□□□□□ -2.14
LRE1	YCL051W	MRPL28	P36527	147 aa		1.71	□□□□□ -2.14
LRE1	YCL051W	ZTA1	P38230	334 aa	Known RBP	1.71	□□□□□ -2.14
LRE1	YCL051W	MMS21	P38632	267 aa		1.71	□□□□□ -2.14
LRE1	YCL051W	ARN2	P38724	620 aa		1.71	□□□□□ -2.14
LRE1	YCL051W	RPF1	P38805	295 aa	Known RBP	1.71	□□□□□ -2.14
LRE1	YCL051W	IKI1	P38874	309 aa		1.71	□□□□□ -2.14
LRE1	YCL051W	END3	P39013	349 aa		1.71	□□□□□ -2.14
LRE1	YCL051W	AVT2	P39981	480 aa		1.71	□□□□□ -2.14
LRE1	YCL051W	SMB1	P40018	196 aa	Known RBP	1.71	□□□□□ -2.14
LRE1	YCL051W	YER085C	P40058	173 aa		1.71	□□□□□ -2.14
LRE1	YCL051W	LSM5	P40089	93 aa	Known RBP	1.71	□□□□□ -2.14
LRE1	YCL051W	BUR6	P40096	142 aa		1.71	□□□□□ -2.14
LRE1	YCL051W	GAT2	P40209	560 aa		1.71	□□□□□ -2.14
LRE1	YCL051W	QRI7	P43122	407 aa		1.71	□□□□□ -2.14
LRE1	YCL051W	OTU1	P43558	301 aa		1.71	□□□□□ -2.14
LRE1	YCL051W	YJR012C	P47087	207 aa		1.71	□□□□□ -2.14
LRE1	YCL051W	YGR079W	P53249	370 aa		1.71	□□□□□ -2.14
LRE1	YCL051W	YGR126W	P53274	230 aa		1.71	□□□□□ -2.14
LRE1	YCL051W	BUD32	P53323	261 aa		1.71	□□□□□ -2.14
LRE1	YCL051W	MPA43	P53583	542 aa	Predicted RBP	1.71	□□□□□ -2.14
LRE1	YCL051W	YNL181W	P53878	407 aa		1.71	□□□□□ -2.14
LRE1	YCL051W	ACT1	P60010	375 aa	Known RBP	1.71	□□□□□ -2.14
LRE1	YCL051W	YDR366C	P87287	132 aa		1.71	□□□□□ -2.14
LRE1	YCL051W	YPL014W	Q02606	381 aa		1.71	□□□□□ -2.14
LRE1	YCL051W	DYN2	Q02647	92 aa		1.71	□□□□□ -2.14
LRE1	YCL051W	SMA1	Q02651	245 aa		1.71	□□□□□ -2.14
LRE1	YCL051W	YPL077C	Q02831	240 aa		1.71	□□□□□ -2.14
LRE1	YCL051W	TDA1	Q03533	586 aa		1.71	□□□□□ -2.14

Retrieved 100 of 5,963 RNA–protein pairs in 32.5 ms