RNA–Protein interactions for RNA: YBR205W

KTR3, Transcript of Putative alpha-1,2-mannosyltransferase, yeast

Gene KTR3, Length 1,215 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
KTR3	YBR205W	ATS1	P31386	333 aa		4.81	□□□□□ -1.64
KTR3	YBR205W	PUP2	P32379	260 aa		4.81	□□□□□ -1.64
KTR3	YBR205W	RPN2	P32565	945 aa	Known RBP	4.81	□□□□□ -1.64
KTR3	YBR205W	AST1	P35183	429 aa		4.81	□□□□□ -1.64
KTR3	YBR205W	GRE3	P38715	327 aa	Known RBP RIP-Chip data	4.81	□□□□□ -1.64	not detected
KTR3	YBR205W	ECM34	P38728	170 aa		4.81	□□□□□ -1.64
KTR3	YBR205W	APE4	P38821	490 aa		4.81	□□□□□ -1.64
KTR3	YBR205W	SWD1	P39706	426 aa		4.81	□□□□□ -1.64
KTR3	YBR205W	AST2	P39945	430 aa	Known RBP	4.81	□□□□□ -1.64
KTR3	YBR205W	SPO73	P40031	143 aa		4.81	□□□□□ -1.64
KTR3	YBR205W	PRE6	P40303	254 aa	Known RBP	4.81	□□□□□ -1.64
KTR3	YBR205W	SNL1	P40548	159 aa		4.81	□□□□□ -1.64
KTR3	YBR205W	HXT9	P40885	567 aa		4.81	□□□□□ -1.64
KTR3	YBR205W	MNN5	P46982	586 aa		4.81	□□□□□ -1.64
KTR3	YBR205W	PUS4	P48567	403 aa	Known RBP	4.81	□□□□□ -1.64
KTR3	YBR205W	PEF1	P53238	335 aa		4.81	□□□□□ -1.64
KTR3	YBR205W	YNR071C	P53757	342 aa		4.81	□□□□□ -1.64
KTR3	YBR205W	HXT11	P54862	567 aa		4.81	□□□□□ -1.64
KTR3	YBR205W	EKI1	Q03764	534 aa		4.81	□□□□□ -1.64
KTR3	YBR205W	UTP21	Q06078	939 aa	Predicted RBP	4.81	□□□□□ -1.64
KTR3	YBR205W	YTH1	Q06102	208 aa	Predicted RBP	4.81	□□□□□ -1.64
KTR3	YBR205W	YPR127W	Q06494	345 aa		4.81	□□□□□ -1.64
KTR3	YBR205W	SYO1	Q07395	620 aa		4.81	□□□□□ -1.64
KTR3	YBR205W	VIK1	Q12045	647 aa		4.81	□□□□□ -1.64
KTR3	YBR205W	RIB3	Q99258	208 aa		4.81	□□□□□ -1.64
KTR3	YBR205W	FLO9	P39712	1322 aa		4.8	□□□□□ -1.64
KTR3	YBR205W	URA3	P03962	267 aa		4.8	□□□□□ -1.64
KTR3	YBR205W	YFR010W-A	P0C5N0	62 aa		4.8	□□□□□ -1.64
KTR3	YBR205W	SNF4	P12904	322 aa		4.8	□□□□□ -1.64
KTR3	YBR205W	DPM1	P14020	267 aa	Known RBP	4.8	□□□□□ -1.64
KTR3	YBR205W	PET9	P18239	318 aa	Known RBP	4.8	□□□□□ -1.64
KTR3	YBR205W	TRS65	P32893	560 aa		4.8	□□□□□ -1.64
KTR3	YBR205W	YGP1	P38616	354 aa	Known RBP	4.8	□□□□□ -1.64
KTR3	YBR205W	YER010C	P40011	234 aa		4.8	□□□□□ -1.64
KTR3	YBR205W	THO1	P40040	218 aa	Known RBP	4.8	□□□□□ -1.64
KTR3	YBR205W	YIL169C	P40442	995 aa		4.8	□□□□□ -1.64
KTR3	YBR205W	CAK1	P43568	368 aa	Predicted RBP	4.8	□□□□□ -1.64
KTR3	YBR205W	FAR7	P43592	221 aa		4.8	□□□□□ -1.64
KTR3	YBR205W	IDS2	P46958	469 aa		4.8	□□□□□ -1.64
KTR3	YBR205W	BAT2	P47176	376 aa	Known RBP	4.8	□□□□□ -1.64
KTR3	YBR205W	YGR168C	P53293	376 aa		4.8	□□□□□ -1.64
KTR3	YBR205W	MEP3	P53390	489 aa		4.8	□□□□□ -1.64
KTR3	YBR205W	TPS1	Q00764	495 aa	Known RBP	4.8	□□□□□ -1.64
KTR3	YBR205W	RSN1	Q03516	953 aa		4.8	□□□□□ -1.64
KTR3	YBR205W	ATX2	Q12067	313 aa		4.8	□□□□□ -1.64
KTR3	YBR205W	NFI1	Q12216	726 aa		4.8	□□□□□ -1.64
KTR3	YBR205W	RLM1	Q12224	676 aa		4.8	□□□□□ -1.64
KTR3	YBR205W	SET6	Q12529	373 aa		4.8	□□□□□ -1.64
KTR3	YBR205W	SEC12	P11655	471 aa		4.79	□□□□□ -1.64
KTR3	YBR205W	ATR1	P13090	542 aa		4.79	□□□□□ -1.64
KTR3	YBR205W	ERD2	P18414	219 aa		4.79	□□□□□ -1.64
KTR3	YBR205W	YCK1	P23291	538 aa		4.79	□□□□□ -1.64
KTR3	YBR205W	RAD51	P25454	400 aa		4.79	□□□□□ -1.64
KTR3	YBR205W	POL4	P25615	582 aa		4.79	□□□□□ -1.64
KTR3	YBR205W	ERG9	P29704	444 aa		4.79	□□□□□ -1.64
KTR3	YBR205W	SNC1	P31109	117 aa		4.79	□□□□□ -1.64
KTR3	YBR205W	GSH1	P32477	678 aa		4.79	□□□□□ -1.64
KTR3	YBR205W	GDH2	P33327	1092 aa	Known RBP	4.79	□□□□□ -1.64
KTR3	YBR205W	MSN4	P33749	630 aa		4.79	□□□□□ -1.64
KTR3	YBR205W	GPX1	P36014	167 aa		4.79	□□□□□ -1.64
KTR3	YBR205W	SRO77	P38163	1010 aa		4.79	□□□□□ -1.64
KTR3	YBR205W	MTC4	P38335	694 aa	Known RBP	4.79	□□□□□ -1.64
KTR3	YBR205W	COG3	P40094	801 aa		4.79	□□□□□ -1.64
KTR3	YBR205W	GCN20	P43535	752 aa	Known RBP	4.79	□□□□□ -1.64
KTR3	YBR205W	MDE1	P47095	244 aa		4.79	□□□□□ -1.64
KTR3	YBR205W	PRM8	P53174	237 aa		4.79	□□□□□ -1.64
KTR3	YBR205W	YGR016W	P53209	190 aa		4.79	□□□□□ -1.64
KTR3	YBR205W	SYF2	P53277	215 aa	Predicted RBP	4.79	□□□□□ -1.64
KTR3	YBR205W	MPP6	P53725	186 aa	Predicted RBP	4.79	□□□□□ -1.64
KTR3	YBR205W	COG5	P53951	403 aa		4.79	□□□□□ -1.64
KTR3	YBR205W	YPL039W	Q03080	316 aa		4.79	□□□□□ -1.64
KTR3	YBR205W	YDL109C	Q12103	647 aa		4.79	□□□□□ -1.64
KTR3	YBR205W	SIA1	Q12212	622 aa		4.79	□□□□□ -1.64
KTR3	YBR205W	SFG1	Q12507	346 aa		4.79	□□□□□ -1.64
KTR3	YBR205W	TIM9	O74700	87 aa		4.78	□□□□□ -1.64
KTR3	YBR205W	TFS1	P14306	219 aa		4.78	□□□□□ -1.64
KTR3	YBR205W	UTR1	P21373	530 aa		4.78	□□□□□ -1.64
KTR3	YBR205W	RPI1	P23250	407 aa	Known RBP	4.78	□□□□□ -1.64
KTR3	YBR205W	SAC1	P32368	623 aa	Known RBP	4.78	□□□□□ -1.64
KTR3	YBR205W	TIM12	P32830	109 aa		4.78	□□□□□ -1.64
KTR3	YBR205W	SLC1	P33333	303 aa		4.78	□□□□□ -1.64
KTR3	YBR205W	JEN1	P36035	616 aa		4.78	□□□□□ -1.64
KTR3	YBR205W	YMR262W	P38430	313 aa		4.78	□□□□□ -1.64
KTR3	YBR205W	REE1	P40893	198 aa		4.78	□□□□□ -1.64
KTR3	YBR205W	YFR054C	P43622	192 aa		4.78	□□□□□ -1.64
KTR3	YBR205W	RBG2	P53295	368 aa	Known RBP	4.78	□□□□□ -1.64
KTR3	YBR205W	MAL12	P53341	584 aa		4.78	□□□□□ -1.64
KTR3	YBR205W	ABZ2	Q03266	374 aa		4.78	□□□□□ -1.64
KTR3	YBR205W	SDC1	Q03323	175 aa		4.78	□□□□□ -1.64
KTR3	YBR205W	MIX14	Q04341	121 aa		4.78	□□□□□ -1.64
KTR3	YBR205W	HRI1	Q05905	244 aa	Known RBP	4.78	□□□□□ -1.64
KTR3	YBR205W	SNT309	Q06091	175 aa	Predicted RBP	4.78	□□□□□ -1.64
KTR3	YBR205W	GAS2	Q06135	555 aa		4.78	□□□□□ -1.64
KTR3	YBR205W	MEU1	Q07938	337 aa	Known RBP RIP-Chip data	4.78	□□□□□ -1.64	not detected
KTR3	YBR205W	COQ10	Q08058	207 aa		4.78	□□□□□ -1.64
KTR3	YBR205W	Q0144	Q9ZZW2	109 aa		4.78	□□□□□ -1.64
KTR3	YBR205W	CDC36	P06100	191 aa	Predicted RBP	4.77	□□□□□ -1.65
KTR3	YBR205W	CBP6	P07253	162 aa	Predicted RBP	4.77	□□□□□ -1.65
KTR3	YBR205W	PEP4	P07267	405 aa	Known RBP	4.77	□□□□□ -1.65
KTR3	YBR205W	YOL162W	P0CF19	215 aa		4.77	□□□□□ -1.65

Retrieved 100 of 5,963 RNA–protein pairs in 134.9 ms