RNA–Protein interactions for RNA: YBL002W

HTB2, Transcript of Histone H2B, yeast

Gene HTB2, Length 396 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HTB2	YBL002W	SKS1	Q12505	502 aa		0.62	□□□□□ -2.31
HTB2	YBL002W	OSM1	P21375	501 aa	Known RBP	0.61	□□□□□ -2.31
HTB2	YBL002W	TOM40	P23644	387 aa	Known RBP	0.61	□□□□□ -2.31
HTB2	YBL002W	RPL16B	P26785	198 aa	Known RBP	0.61	□□□□□ -2.31
HTB2	YBL002W	IMP3	P32899	183 aa	Predicted RBP	0.61	□□□□□ -2.31
HTB2	YBL002W	YDR089W	P38966	869 aa		0.61	□□□□□ -2.31
HTB2	YBL002W	FRE6	Q12473	712 aa		0.61	□□□□□ -2.31
HTB2	YBL002W	NBL1	Q3E7Y6	73 aa		0.61	□□□□□ -2.31
HTB2	YBL002W	ZRT1	P32804	376 aa		0.6	□□□□□ -2.31
HTB2	YBL002W	YHL026C	P38740	315 aa		0.6	□□□□□ -2.31
HTB2	YBL002W	JEM1	P40358	645 aa		0.6	□□□□□ -2.31
HTB2	YBL002W	AVT7	P40501	490 aa		0.6	□□□□□ -2.31
HTB2	YBL002W	RPE1	P46969	238 aa		0.6	□□□□□ -2.31
HTB2	YBL002W	UBC13	P52490	153 aa		0.6	□□□□□ -2.31
HTB2	YBL002W	OKP1	P53298	406 aa		0.6	□□□□□ -2.31
HTB2	YBL002W	EOS1	P53938	366 aa		0.6	□□□□□ -2.31
HTB2	YBL002W	YPL039W	Q03080	316 aa		0.6	□□□□□ -2.31
HTB2	YBL002W	DBP9	Q06218	594 aa	Known RBP	0.6	□□□□□ -2.31
HTB2	YBL002W	YPL247C	Q12523	523 aa		0.6	□□□□□ -2.31
HTB2	YBL002W	YBL112C	Q3E7Y4	105 aa		0.6	□□□□□ -2.31
HTB2	YBL002W	ISD11	Q6Q560	94 aa		0.6	□□□□□ -2.31
HTB2	YBL002W	RAD7	P06779	565 aa		0.59	□□□□□ -2.31
HTB2	YBL002W	DOA4	P32571	926 aa		0.59	□□□□□ -2.31
HTB2	YBL002W	YKL162C	P36052	402 aa		0.59	□□□□□ -2.31
HTB2	YBL002W	RXT2	P38255	430 aa		0.59	□□□□□ -2.31
HTB2	YBL002W	CAJ1	P39101	391 aa		0.59	□□□□□ -2.31
HTB2	YBL002W	AYR1	P40471	297 aa		0.59	□□□□□ -2.31
HTB2	YBL002W	INA22	P40576	216 aa		0.59	□□□□□ -2.31
HTB2	YBL002W	GON7	P46984	123 aa		0.59	□□□□□ -2.31
HTB2	YBL002W	STE23	Q06010	1027 aa		0.59	□□□□□ -2.31
HTB2	YBL002W	YOL019W	Q08157	551 aa		0.59	□□□□□ -2.31
HTB2	YBL002W	NOT5	Q12514	560 aa	Predicted RBP	0.59	□□□□□ -2.31
HTB2	YBL002W	BOL1	Q3E793	110 aa		0.59	□□□□□ -2.31
HTB2	YBL002W	YEL009C-A	A0A023PZF2	135 aa		0.58	□□□□□ -2.32
HTB2	YBL002W	ATG15	P25641	520 aa		0.58	□□□□□ -2.32
HTB2	YBL002W	VPH1	P32563	840 aa	Known RBP	0.58	□□□□□ -2.32
HTB2	YBL002W	SEN34	P39707	275 aa		0.58	□□□□□ -2.32
HTB2	YBL002W	YJL118W	P47022	219 aa		0.58	□□□□□ -2.32
HTB2	YBL002W	YPT32	P51996	222 aa	Known RBP	0.58	□□□□□ -2.32
HTB2	YBL002W	YMR114C	Q04471	368 aa	Known RBP	0.58	□□□□□ -2.32
HTB2	YBL002W	ECM18	Q04623	453 aa		0.58	□□□□□ -2.32
HTB2	YBL002W	RPL18A	P0CX49	186 aa	Known RBP	0.57	□□□□□ -2.32
HTB2	YBL002W	RPL18B	P0CX50	186 aa	Known RBP	0.57	□□□□□ -2.32
HTB2	YBL002W	BMH1	P29311	267 aa	Known RBP	0.57	□□□□□ -2.32
HTB2	YBL002W	ERG2	P32352	222 aa		0.57	□□□□□ -2.32
HTB2	YBL002W	AEP1	P32493	518 aa		0.57	□□□□□ -2.32
HTB2	YBL002W	COT1	P32798	439 aa		0.57	□□□□□ -2.32
HTB2	YBL002W	POP8	P38208	133 aa		0.57	□□□□□ -2.32
HTB2	YBL002W	PHO89	P38361	574 aa		0.57	□□□□□ -2.32
HTB2	YBL002W	SHQ1	P40486	507 aa	Predicted RBP	0.57	□□□□□ -2.32
HTB2	YBL002W	GDS1	P41913	522 aa		0.57	□□□□□ -2.32
HTB2	YBL002W	CUE3	P53137	624 aa	Known RBP	0.57	□□□□□ -2.32
HTB2	YBL002W	COG7	P53195	279 aa		0.57	□□□□□ -2.32
HTB2	YBL002W	SWC4	P53201	476 aa		0.57	□□□□□ -2.32
HTB2	YBL002W	INM2	Q05533	292 aa		0.57	□□□□□ -2.32
HTB2	YBL002W	TAZ1	Q06510	381 aa		0.57	□□□□□ -2.32
HTB2	YBL002W	RNR2	P09938	399 aa	Known RBP	0.56	□□□□□ -2.32
HTB2	YBL002W	TAL1	P15019	335 aa	Known RBP	0.56	□□□□□ -2.32
HTB2	YBL002W	CAT2	P32796	670 aa	Known RBP	0.56	□□□□□ -2.32
HTB2	YBL002W	TIF34	P40217	347 aa	Known RBP	0.56	□□□□□ -2.32
HTB2	YBL002W	PML1	Q07930	204 aa	Predicted RBP	0.56	□□□□□ -2.32
HTB2	YBL002W	CDC7	P06243	507 aa		0.55	□□□□□ -2.32
HTB2	YBL002W	RPL31A	P0C2H8	113 aa	Known RBP	0.55	□□□□□ -2.32
HTB2	YBL002W	KRE6	P32486	720 aa		0.55	□□□□□ -2.32
HTB2	YBL002W	ARN2	P38724	620 aa		0.55	□□□□□ -2.32
HTB2	YBL002W	LIN1	P38852	340 aa	Predicted RBP	0.55	□□□□□ -2.32
HTB2	YBL002W	RPL10	P41805	221 aa	Known RBP	0.55	□□□□□ -2.32
HTB2	YBL002W	PBP4	Q07362	185 aa	Known RBP	0.55	□□□□□ -2.32
HTB2	YBL002W	YPR064W	Q12492	139 aa		0.55	□□□□□ -2.32
HTB2	YBL002W	IZH4	Q99393	312 aa		0.55	□□□□□ -2.32
HTB2	YBL002W	POT1	P27796	417 aa	Known RBP RIP-Chip data	0.54	□□□□□ -2.32	not detected
HTB2	YBL002W	LAS1	P36146	502 aa	Predicted RBP	0.54	□□□□□ -2.32
HTB2	YBL002W	SIF2	P38262	535 aa		0.54	□□□□□ -2.32
HTB2	YBL002W	SPT8	P38915	602 aa		0.54	□□□□□ -2.32
HTB2	YBL002W	YER135C	P40082	130 aa		0.54	□□□□□ -2.32
HTB2	YBL002W	YML018C	Q03730	393 aa		0.54	□□□□□ -2.32
HTB2	YBL002W	DPP1	Q05521	289 aa		0.54	□□□□□ -2.32
HTB2	YBL002W	APC9	Q12107	265 aa		0.54	□□□□□ -2.32
HTB2	YBL002W	YOR114W	Q12219	294 aa		0.54	□□□□□ -2.32
HTB2	YBL002W	RRP42	Q12277	265 aa	Predicted RBP	0.54	□□□□□ -2.32
HTB2	YBL002W	PUT1	P09368	476 aa		0.53	□□□□□ -2.32
HTB2	YBL002W	SCM4	P32564	187 aa		0.53	□□□□□ -2.32
HTB2	YBL002W	GDH2	P33327	1092 aa	Known RBP	0.53	□□□□□ -2.32
HTB2	YBL002W	CSG2	P35206	410 aa		0.53	□□□□□ -2.32
HTB2	YBL002W	PEP8	P40335	379 aa		0.53	□□□□□ -2.32
HTB2	YBL002W	SNX4	P47057	423 aa		0.53	□□□□□ -2.32
HTB2	YBL002W	PDR16	P53860	351 aa	Known RBP	0.53	□□□□□ -2.32
HTB2	YBL002W	FMP41	P53889	259 aa	Known RBP	0.53	□□□□□ -2.32
HTB2	YBL002W	CAB5	Q03941	241 aa		0.53	□□□□□ -2.32
HTB2	YBL002W	PEX12	Q04370	399 aa		0.53	□□□□□ -2.32
HTB2	YBL002W	SAM4	Q08985	325 aa	Known RBP	0.53	□□□□□ -2.32
HTB2	YBL002W	RAS2	P01120	322 aa	Known RBP	0.52	□□□□□ -2.33
HTB2	YBL002W	SGA1	P08019	549 aa		0.52	□□□□□ -2.33
HTB2	YBL002W	YOL162W	P0CF19	215 aa		0.52	□□□□□ -2.33
HTB2	YBL002W	GAL3	P13045	520 aa		0.52	□□□□□ -2.33
HTB2	YBL002W	POX1	P13711	748 aa		0.52	□□□□□ -2.33
HTB2	YBL002W	DPB2	P24482	689 aa	Predicted RBP	0.52	□□□□□ -2.33
HTB2	YBL002W	SFC1	P33303	322 aa		0.52	□□□□□ -2.33
HTB2	YBL002W	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	0.52	□□□□□ -2.33	not detected
HTB2	YBL002W	YHI9	P38765	294 aa		0.52	□□□□□ -2.33

Retrieved 100 of 5,963 RNA–protein pairs in 42.1 ms