RNA–Protein interactions for RNA: YAL021C

CCR4, Transcript of Component of the CCR4-NOT transcriptional complex, yeastyeast

Gene CCR4, Length 2,514 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CCR4YAL021C MRPS16Q02608 121 aa6.78□□□□□ -1.32
CCR4YAL021C MAK3Q03503 176 aa6.78□□□□□ -1.32
CCR4YAL021C BSP1Q06604 576 aa6.78□□□□□ -1.32
CCR4YAL021C FRE8Q12209 686 aa6.78□□□□□ -1.32
CCR4YAL021C CYC7P00045 113 aa6.77□□□□□ -1.33
CCR4YAL021C YCL049CP25577 312 aa6.77□□□□□ -1.33
CCR4YAL021C WBP1P33767 430 aaKnown RBP6.77□□□□□ -1.33
CCR4YAL021C YKR051WP36142 418 aa6.77□□□□□ -1.33
CCR4YAL021C DAD2P36162 133 aa6.77□□□□□ -1.33
CCR4YAL021C ERG7P38604 731 aa6.77□□□□□ -1.33
CCR4YAL021C CHL4P38907 458 aa6.77□□□□□ -1.33
CCR4YAL021C YIL152WP40455 235 aa6.77□□□□□ -1.33
CCR4YAL021C YIL054WP40524 105 aa6.77□□□□□ -1.33
CCR4YAL021C BAP3P41815 604 aa6.77□□□□□ -1.33
CCR4YAL021C ROG1P53118 685 aa6.77□□□□□ -1.33
CCR4YAL021C DAL4Q04895 635 aa6.77□□□□□ -1.33
CCR4YAL021C YDR306CQ06640 478 aa6.77□□□□□ -1.33
CCR4YAL021C RDR1Q08904 546 aa6.77□□□□□ -1.33
CCR4YAL021C RGT2Q12300 763 aa6.77□□□□□ -1.33
CCR4YAL021C PST1Q12355 444 aa6.77□□□□□ -1.33
CCR4YAL021C SUC2P00724 532 aa6.77□□□□□ -1.33
CCR4YAL021C SEC22P22214 214 aa6.77□□□□□ -1.33
CCR4YAL021C MDM31P38880 579 aa6.77□□□□□ -1.33
CCR4YAL021C CSN12P47130 423 aa6.77□□□□□ -1.33
CCR4YAL021C YNR014WP53719 212 aa6.77□□□□□ -1.33
CCR4YAL021C TIM8P57744 87 aa6.77□□□□□ -1.33
CCR4YAL021C GOT1Q03554 138 aa6.77□□□□□ -1.33
CCR4YAL021C HRD3Q05787 833 aa6.77□□□□□ -1.33
CCR4YAL021C ENV9Q08651 330 aa6.77□□□□□ -1.33
CCR4YAL021C YTM1Q12024 460 aaPredicted RBP6.77□□□□□ -1.33
CCR4YAL021C USB1Q12208 290 aaKnown RBP6.77□□□□□ -1.33
CCR4YAL021C YDL199CQ12407 687 aa6.77□□□□□ -1.33
CCR4YAL021C NUC1P08466 329 aa6.76□□□□□ -1.33
CCR4YAL021C GUK1P15454 187 aaKnown RBP6.76□□□□□ -1.33
CCR4YAL021C QDR3P38227 689 aa6.76□□□□□ -1.33
CCR4YAL021C PPE1P38796 400 aa6.76□□□□□ -1.33
CCR4YAL021C DAD3P69850 94 aa6.76□□□□□ -1.33
CCR4YAL021C RTN2Q12443 393 aa6.76□□□□□ -1.33
CCR4YAL021C TDH2P00358 332 aaKnown RBP6.76□□□□□ -1.33
CCR4YAL021C TDH3P00359 332 aaKnown RBP RIP-Chip data6.76□□□□□ -1.33not detected
CCR4YAL021C SGA1P08019 549 aa6.76□□□□□ -1.33
CCR4YAL021C HAP3P13434 144 aa6.76□□□□□ -1.33
CCR4YAL021C ERS1P17261 260 aa6.76□□□□□ -1.33
CCR4YAL021C ACO1P19414 778 aaKnown RBP RIP-Chip data6.76□□□□□ -1.33not detected
CCR4YAL021C PRE9P23638 258 aaKnown RBP6.76□□□□□ -1.33
CCR4YAL021C PEX2P32800 271 aa6.76□□□□□ -1.33
CCR4YAL021C CHS7P38843 316 aa6.76□□□□□ -1.33
CCR4YAL021C FMC1P40491 155 aa6.76□□□□□ -1.33
CCR4YAL021C EXG2P52911 562 aa6.76□□□□□ -1.33
CCR4YAL021C YIP4P53093 235 aa6.76□□□□□ -1.33
CCR4YAL021C BIO4P53630 237 aa6.76□□□□□ -1.33
CCR4YAL021C YMR160WQ03823 816 aa6.76□□□□□ -1.33
CCR4YAL021C NOC4Q06512 552 aaPredicted RBP6.76□□□□□ -1.33
CCR4YAL021C IRC13Q08630 104 aa6.76□□□□□ -1.33
CCR4YAL021C SGF29P25554 259 aa6.75□□□□□ -1.33
CCR4YAL021C YCR061WP25639 631 aa6.75□□□□□ -1.33
CCR4YAL021C YMR144WP40214 342 aaKnown RBP6.75□□□□□ -1.33
CCR4YAL021C MOB1P40484 314 aa6.75□□□□□ -1.33
CCR4YAL021C RPL34BP40525 121 aaKnown RBP6.75□□□□□ -1.33
CCR4YAL021C SFH5P47008 294 aa6.75□□□□□ -1.33
CCR4YAL021C YGL101WP53144 215 aa6.75□□□□□ -1.33
CCR4YAL021C GTR2P53290 341 aa6.75□□□□□ -1.33
CCR4YAL021C ASI3P53983 676 aa6.75□□□□□ -1.33
CCR4YAL021C YRA1Q12159 226 aaKnown RBP6.75□□□□□ -1.33
CCR4YAL021C TRM13Q12383 476 aa6.75□□□□□ -1.33
CCR4YAL021C AHA1Q12449 350 aaKnown RBP6.75□□□□□ -1.33
CCR4YAL021C SPE4Q12455 300 aa6.75□□□□□ -1.33
CCR4YAL021C FOL3Q12676 427 aaPredicted RBP6.75□□□□□ -1.33
CCR4YAL021C STE4P18851 423 aa6.75□□□□□ -1.33
CCR4YAL021C YCR023CP25351 611 aa6.75□□□□□ -1.33
CCR4YAL021C YCL068CP25593 260 aa6.75□□□□□ -1.33
CCR4YAL021C NUD1P32336 851 aa6.75□□□□□ -1.33
CCR4YAL021C SNC2P33328 115 aa6.75□□□□□ -1.33
CCR4YAL021C HPA3P39979 161 aa6.75□□□□□ -1.33
CCR4YAL021C IME4P41833 600 aa6.75□□□□□ -1.33
CCR4YAL021C YFL064CP43540 174 aa6.75□□□□□ -1.33
CCR4YAL021C GAT1P43574 510 aa6.75□□□□□ -1.33
CCR4YAL021C STE24P47154 453 aa6.75□□□□□ -1.33
CCR4YAL021C YDR415CQ04033 374 aaPredicted RBP6.75□□□□□ -1.33
CCR4YAL021C IPK1Q06667 281 aa6.75□□□□□ -1.33
CCR4YAL021C ACK1Q07622 623 aaPredicted RBP6.75□□□□□ -1.33
CCR4YAL021C PRR2Q12310 699 aa6.75□□□□□ -1.33
CCR4YAL021C HBN1Q96VH4 193 aa6.75□□□□□ -1.33
CCR4YAL021C GCR1P07261 785 aa6.74□□□□□ -1.33
CCR4YAL021C TY1A-HP0C2I4 478 aaKnown RBP6.74□□□□□ -1.33
CCR4YAL021C ADD66P36040 267 aa6.74□□□□□ -1.33
CCR4YAL021C KTR3P38130 404 aaPredicted RBP6.74□□□□□ -1.33
CCR4YAL021C PAC2P39937 518 aa6.74□□□□□ -1.33
CCR4YAL021C HXT16P47185 567 aa6.74□□□□□ -1.33
CCR4YAL021C RIB4P50861 169 aaPredicted RBP6.74□□□□□ -1.33
CCR4YAL021C AAH1P53909 347 aa6.74□□□□□ -1.33
CCR4YAL021C YLR446WQ06204 433 aa6.74□□□□□ -1.33
CCR4YAL021C ATG33Q06485 197 aa6.74□□□□□ -1.33
CCR4YAL021C YNR034W-AQ3E841 98 aa6.74□□□□□ -1.33
CCR4YAL021C YLR462WO13556 202 aa6.74□□□□□ -1.33
CCR4YAL021C MDH1P17505 334 aaKnown RBP RIP-Chip data6.74□□□□□ -1.33not detected
CCR4YAL021C PPZ1P26570 692 aa6.74□□□□□ -1.33
CCR4YAL021C ACB1P31787 87 aa6.74□□□□□ -1.33
CCR4YAL021C MET22P32179 357 aa6.74□□□□□ -1.33
CCR4YAL021C YKU70P32807 602 aa6.74□□□□□ -1.33
Retrieved 100 of 5,963 RNA–protein pairs in 43.4 ms