RNA–Protein interactions for RNA: ENST00000641891.1

PHGDH-229, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,175 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-229ENST00000641891 USP20Q9Y2K6 914 aa18.35■□□□□ 0.53
PHGDH-229ENST00000641891 DAAM1Q9Y4D1 1078 aa18.35■□□□□ 0.53
PHGDH-229ENST00000641891 USP2O75604 605 aaPredicted RBP18.35■□□□□ 0.53
PHGDH-229ENST00000641891 SGPL1O95470 568 aa18.35■□□□□ 0.53
PHGDH-229ENST00000641891 MTERF2Q49AM1 385 aa18.35■□□□□ 0.53
PHGDH-229ENST00000641891 TAF3Q5VWG9 929 aa18.35■□□□□ 0.53
PHGDH-229ENST00000641891 TAS1R3Q7RTX0 852 aa18.35■□□□□ 0.53
PHGDH-229ENST00000641891 PPM1KQ8N3J5 372 aa18.35■□□□□ 0.53
PHGDH-229ENST00000641891 ACTRT1Q8TDG2 376 aa18.35■□□□□ 0.53
PHGDH-229ENST00000641891 PARD3BQ8TEW8 1205 aa18.35■□□□□ 0.53
PHGDH-229ENST00000641891 SPIRE2Q8WWL2 714 aa18.35■□□□□ 0.53
PHGDH-229ENST00000641891 IFT81Q8WYA0 676 aa18.35■□□□□ 0.53
PHGDH-229ENST00000641891 POMGNT1Q8WZA1 660 aa18.35■□□□□ 0.53
PHGDH-229ENST00000641891 HES6Q96HZ4 224 aa18.35■□□□□ 0.53
PHGDH-229ENST00000641891 CYP26B1Q9NR63 512 aa18.35■□□□□ 0.53
PHGDH-229ENST00000641891 NFU1Q9UMS0 254 aa18.35■□□□□ 0.53
PHGDH-229ENST00000641891 LOC285556D6RIA3 1793 aa18.35■□□□□ 0.53
PHGDH-229ENST00000641891 POLR2AP24928 1970 aaKnown RBP18.34■□□□□ 0.53
PHGDH-229ENST00000641891 FAM153BP0C7A2 387 aa18.34■□□□□ 0.53
PHGDH-229ENST00000641891 LMAN1P49257 510 aa18.34■□□□□ 0.53
PHGDH-229ENST00000641891 PPATQ06203 517 aa18.34■□□□□ 0.53
PHGDH-229ENST00000641891 VGLL4Q14135 290 aa18.34■□□□□ 0.53
PHGDH-229ENST00000641891 FAM153CQ494X1 144 aa18.34■□□□□ 0.53
PHGDH-229ENST00000641891 CYFIP1Q7L576 1253 aa18.34■□□□□ 0.53
PHGDH-229ENST00000641891 FMNL3Q8IVF7 1028 aa18.34■□□□□ 0.53
PHGDH-229ENST00000641891 IFT20Q8IY31 132 aa18.34■□□□□ 0.53
PHGDH-229ENST00000641891 SYCE1Q8N0S2 351 aa18.34■□□□□ 0.53
PHGDH-229ENST00000641891 SCFD2Q8WU76 684 aa18.34■□□□□ 0.53
PHGDH-229ENST00000641891 CASKIN2Q8WXE0 1202 aa18.34■□□□□ 0.53
PHGDH-229ENST00000641891 EXOC4Q96A65 974 aa18.34■□□□□ 0.53
PHGDH-229ENST00000641891 HVCN1Q96D96 273 aa18.34■□□□□ 0.53
PHGDH-229ENST00000641891 NTPCRQ9BSD7 190 aaKnown RBP18.34■□□□□ 0.53
PHGDH-229ENST00000641891 POLR3FQ9H1D9 316 aaPredicted RBP18.34■□□□□ 0.53
PHGDH-229ENST00000641891 HOXC10Q9NYD6 342 aa18.34■□□□□ 0.53
PHGDH-229ENST00000641891 FAM153AQ9UHL3 310 aa18.34■□□□□ 0.53
PHGDH-229ENST00000641891 SNCAIPQ9Y6H5 919 aa18.34■□□□□ 0.53
PHGDH-229ENST00000641891 PGRMC1O00264 195 aaKnown RBP18.34■□□□□ 0.53
PHGDH-229ENST00000641891 TNNC1P63316 161 aa18.34■□□□□ 0.53
PHGDH-229ENST00000641891 NOP9Q86U38 636 aaKnown RBP18.34■□□□□ 0.53
PHGDH-229ENST00000641891 PCDHB18PQ96TA0 734 aa18.34■□□□□ 0.53
PHGDH-229ENST00000641891 CHORDC1Q9UHD1 332 aaPredicted RBP18.34■□□□□ 0.53
PHGDH-229ENST00000641891 AMFRQ9UKV5 643 aa18.34■□□□□ 0.53
PHGDH-229ENST00000641891 ANKRD62A6NC57 917 aa18.33■□□□□ 0.52
PHGDH-229ENST00000641891 GOLGA6BA6NDN3 693 aa18.33■□□□□ 0.52
PHGDH-229ENST00000641891 DGAT1O75907 488 aa18.33■□□□□ 0.52
PHGDH-229ENST00000641891 SUPT20HL2P0C7V6 817 aa18.33■□□□□ 0.52
PHGDH-229ENST00000641891 ITGA4P13612 1032 aa18.33■□□□□ 0.52
PHGDH-229ENST00000641891 CHRNB2P17787 502 aa18.33■□□□□ 0.52
PHGDH-229ENST00000641891 ATP4AP20648 1035 aa18.33■□□□□ 0.52
PHGDH-229ENST00000641891 GNPTABQ3T906 1256 aa18.33■□□□□ 0.52
PHGDH-229ENST00000641891 SUPT20HL1Q3ZLR7 823 aa18.33■□□□□ 0.52
PHGDH-229ENST00000641891 TAS1R2Q8TE23 839 aa18.33■□□□□ 0.52
PHGDH-229ENST00000641891 CDHR1Q96JP9 859 aa18.33■□□□□ 0.52
PHGDH-229ENST00000641891 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.33■□□□□ 0.526e-10■■■■□ 22.4
PHGDH-229ENST00000641891 FAM204AQ9H8W3 233 aa18.33■□□□□ 0.52
PHGDH-229ENST00000641891 ATP6V0A4Q9HBG4 840 aa18.33■□□□□ 0.52
PHGDH-229ENST00000641891 HNRNPDLO14979 420 aaKnown RBP18.32■□□□□ 0.52
PHGDH-229ENST00000641891 DDX3YO15523 660 aaKnown RBP18.32■□□□□ 0.52
PHGDH-229ENST00000641891 CYP26A1O43174 497 aa18.32■□□□□ 0.52
PHGDH-229ENST00000641891 FTLP02792 175 aaPredicted RBP18.32■□□□□ 0.52
PHGDH-229ENST00000641891 DLATP10515 647 aaKnown RBP18.32■□□□□ 0.52
PHGDH-229ENST00000641891 CYP24A1Q07973 514 aa18.32■□□□□ 0.52
PHGDH-229ENST00000641891 DCAF12L1Q5VU92 463 aa18.32■□□□□ 0.52
PHGDH-229ENST00000641891 KRT39Q6A163 491 aa18.32■□□□□ 0.52
PHGDH-229ENST00000641891 MIS18BP1Q6P0N0 1132 aa18.32■□□□□ 0.52
PHGDH-229ENST00000641891 EMBQ6PCB8 327 aa18.32■□□□□ 0.52
PHGDH-229ENST00000641891 SEPT14Q6ZU15 432 aa18.32■□□□□ 0.52
PHGDH-229ENST00000641891 SLC47A2Q86VL8 602 aa18.32■□□□□ 0.52
PHGDH-229ENST00000641891 GPC2Q8N158 579 aa18.32■□□□□ 0.52
PHGDH-229ENST00000641891 MCPH1Q8NEM0 835 aa18.32■□□□□ 0.52
PHGDH-229ENST00000641891 EPS8L1Q8TE68 723 aa18.32■□□□□ 0.52
PHGDH-229ENST00000641891 CAVIN3Q969G5 261 aa18.32■□□□□ 0.52
PHGDH-229ENST00000641891 BICD1Q96G01 975 aa18.32■□□□□ 0.52
PHGDH-229ENST00000641891 NOCTQ9UK39 431 aaKnown RBP18.32■□□□□ 0.52
PHGDH-229ENST00000641891 PPP2R3BQ9Y5P8 575 aa18.32■□□□□ 0.52
PHGDH-229ENST00000641891 PMM2O15305 246 aa18.32■□□□□ 0.52
PHGDH-229ENST00000641891 DKC1O60832 514 aaKnown RBP eCLIP18.32■□□□□ 0.521e-16■■■■■ 39.7
PHGDH-229ENST00000641891 FAM71AQ8IYT1 594 aa18.32■□□□□ 0.52
PHGDH-229ENST00000641891 ANKRD35Q8N283 1001 aa18.32■□□□□ 0.52
PHGDH-229ENST00000641891 RASGEF1CQ8N431 466 aa18.32■□□□□ 0.52
PHGDH-229ENST00000641891 TMEM143Q96AN5 459 aa18.32■□□□□ 0.52
PHGDH-229ENST00000641891 MFSD14AQ96MC6 490 aa18.32■□□□□ 0.52
PHGDH-229ENST00000641891 FBXL18Q96ME1 805 aa18.32■□□□□ 0.52
PHGDH-229ENST00000641891 FAM213AQ9BRX8 229 aa18.32■□□□□ 0.52
PHGDH-229ENST00000641891 DDX47Q9H0S4 455 aaKnown RBP18.32■□□□□ 0.52
PHGDH-229ENST00000641891 C17orf75Q9HAS0 396 aa18.32■□□□□ 0.52
PHGDH-229ENST00000641891 TMEM8AQ9HCN3 771 aa18.32■□□□□ 0.52
PHGDH-229ENST00000641891 BTBD7Q9P203 1132 aa18.32■□□□□ 0.52
PHGDH-229ENST00000641891 GUCY2FP51841 1108 aa18.31■□□□□ 0.52
PHGDH-229ENST00000641891 MCCD1P59942 119 aaPredicted RBP18.31■□□□□ 0.52
PHGDH-229ENST00000641891 STXBP2Q15833 593 aa18.31■□□□□ 0.52
PHGDH-229ENST00000641891 SH3D19Q5HYK7 790 aa18.31■□□□□ 0.52
PHGDH-229ENST00000641891 HELQQ8TDG4 1101 aa18.31■□□□□ 0.52
PHGDH-229ENST00000641891 DHX38Q92620 1227 aaKnown RBP18.31■□□□□ 0.52
PHGDH-229ENST00000641891 KRIT1O00522 736 aa18.31■□□□□ 0.52
PHGDH-229ENST00000641891 ATMINO43313 823 aaPredicted RBP18.31■□□□□ 0.52
PHGDH-229ENST00000641891 STAM2O75886 525 aa18.31■□□□□ 0.52
PHGDH-229ENST00000641891 CALCAP01258 141 aa18.31■□□□□ 0.52
PHGDH-229ENST00000641891 MMEP08473 750 aa18.31■□□□□ 0.52
PHGDH-229ENST00000641891 ERVK-9P63128 1117 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms