RNA–Protein interactions for RNA: ENST00000640135.1

SCN1B-208, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1B, Length 4,846 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-208ENST00000640135 CD302Q8IX05 232 aa11.76□□□□□ -0.53
SCN1B-208ENST00000640135 ARHGEF2Q92974 986 aaKnown RBP11.76□□□□□ -0.53
SCN1B-208ENST00000640135 MKNK1Q9BUB5 465 aa11.76□□□□□ -0.53
SCN1B-208ENST00000640135 C17orf102A2RUQ5 167 aa11.76□□□□□ -0.53
SCN1B-208ENST00000640135 ATP8B1O43520 1251 aa11.76□□□□□ -0.53
SCN1B-208ENST00000640135 KRT17Q04695 432 aa11.76□□□□□ -0.53
SCN1B-208ENST00000640135 DCAF4L1Q3SXM0 396 aa11.76□□□□□ -0.53
SCN1B-208ENST00000640135 SV2CQ496J9 727 aa11.76□□□□□ -0.53
SCN1B-208ENST00000640135 SYNPO2Q9UMS6 1093 aa11.76□□□□□ -0.53
SCN1B-208ENST00000640135 USH1CQ9Y6N9 552 aa11.76□□□□□ -0.53
SCN1B-208ENST00000640135 EMSYQ7Z589 1322 aa11.76□□□□□ -0.53
SCN1B-208ENST00000640135 FAM170AA1A519 330 aa11.75□□□□□ -0.53
SCN1B-208ENST00000640135 ANO9A1A5B4 782 aa11.75□□□□□ -0.53
SCN1B-208ENST00000640135 NEMP1O14524 444 aa11.75□□□□□ -0.53
SCN1B-208ENST00000640135 EIF3BP55884 814 aaKnown RBP11.75□□□□□ -0.53
SCN1B-208ENST00000640135 SEPT6Q14141 434 aa11.75□□□□□ -0.53
SCN1B-208ENST00000640135 KRT33BQ14525 404 aa11.75□□□□□ -0.53
SCN1B-208ENST00000640135 GLE1Q53GS7 698 aaKnown RBP11.75□□□□□ -0.53
SCN1B-208ENST00000640135 CAPN12Q6ZSI9 719 aa11.75□□□□□ -0.53
SCN1B-208ENST00000640135 C17orf53Q8N3J3 647 aaPredicted RBP11.75□□□□□ -0.53
SCN1B-208ENST00000640135 WHAMMQ8TF30 809 aa11.75□□□□□ -0.53
SCN1B-208ENST00000640135 C11orf70Q9BRQ4 267 aa11.75□□□□□ -0.53
SCN1B-208ENST00000640135 ZWILCHQ9H900 591 aa11.75□□□□□ -0.53
SCN1B-208ENST00000640135 KCNH7Q9NS40 1196 aa11.75□□□□□ -0.53
SCN1B-208ENST00000640135 FBXO2Q9UK22 296 aaPredicted RBP11.75□□□□□ -0.53
SCN1B-208ENST00000640135 POC1B-GALNT4F8VUJ3 575 aa11.75□□□□□ -0.53
SCN1B-208ENST00000640135 P4HA2O15460 535 aa11.75□□□□□ -0.53
SCN1B-208ENST00000640135 FTCDO95954 541 aa11.75□□□□□ -0.53
SCN1B-208ENST00000640135 PLTPP55058 493 aa11.75□□□□□ -0.53
SCN1B-208ENST00000640135 CUL1Q13616 776 aa11.75□□□□□ -0.53
SCN1B-208ENST00000640135 SCG3Q8WXD2 468 aaKnown RBP11.75□□□□□ -0.53
SCN1B-208ENST00000640135 HSPH1Q92598 858 aa11.75□□□□□ -0.53
SCN1B-208ENST00000640135 AGBL1Q96MI9 1066 aa11.75□□□□□ -0.53
SCN1B-208ENST00000640135 MED15Q96RN5 788 aa11.75□□□□□ -0.53
SCN1B-208ENST00000640135 MRIQ9BWK5 157 aa11.75□□□□□ -0.53
SCN1B-208ENST00000640135 AGAP1Q9UPQ3 857 aa11.75□□□□□ -0.53
SCN1B-208ENST00000640135 CNTNAP5Q8WYK1 1306 aa11.75□□□□□ -0.53
SCN1B-208ENST00000640135 GPR182O15218 404 aa11.75□□□□□ -0.53
SCN1B-208ENST00000640135 MAP3K7O43318 606 aa11.75□□□□□ -0.53
SCN1B-208ENST00000640135 OAZ1P54368 228 aa11.75□□□□□ -0.53
SCN1B-208ENST00000640135 MAPRE1Q15691 268 aaKnown RBP11.75□□□□□ -0.53
SCN1B-208ENST00000640135 WDR72Q3MJ13 1102 aa11.75□□□□□ -0.53
SCN1B-208ENST00000640135 TAB3Q8N5C8 712 aaPredicted RBP11.75□□□□□ -0.53
SCN1B-208ENST00000640135 DNERQ8NFT8 737 aa11.75□□□□□ -0.53
SCN1B-208ENST00000640135 ZKSCAN4Q969J2 545 aaPredicted RBP11.75□□□□□ -0.53
SCN1B-208ENST00000640135 IFT43Q96FT9 208 aa11.75□□□□□ -0.53
SCN1B-208ENST00000640135 RTFDC1Q9BY42 306 aaPredicted RBP11.75□□□□□ -0.53
SCN1B-208ENST00000640135 SPTLC3Q9NUV7 552 aa11.75□□□□□ -0.53
SCN1B-208ENST00000640135 HSPBP1Q9NZL4 362 aa11.75□□□□□ -0.53
SCN1B-208ENST00000640135 TJP2Q9UDY2 1190 aa11.75□□□□□ -0.53
SCN1B-208ENST00000640135 AP3B1O00203 1094 aa11.75□□□□□ -0.53
SCN1B-208ENST00000640135 BNIP3LO60238 219 aa11.75□□□□□ -0.53
SCN1B-208ENST00000640135 MT-ND3P03897 115 aa11.75□□□□□ -0.53
SCN1B-208ENST00000640135 CYP2C19P33261 490 aa11.75□□□□□ -0.53
SCN1B-208ENST00000640135 HSD17B4P51659 736 aa11.75□□□□□ -0.53
SCN1B-208ENST00000640135 DR1Q01658 176 aa11.75□□□□□ -0.53
SCN1B-208ENST00000640135 SNX1Q13596 522 aa11.75□□□□□ -0.53
SCN1B-208ENST00000640135 PHLDB2Q86SQ0 1253 aa11.75□□□□□ -0.53
SCN1B-208ENST00000640135 STKLD1Q8NE28 680 aa11.75□□□□□ -0.53
SCN1B-208ENST00000640135 EPAS1Q99814 870 aa11.75□□□□□ -0.53
SCN1B-208ENST00000640135 KIAA1683Q9H0B3 1180 aa11.75□□□□□ -0.53
SCN1B-208ENST00000640135 PARVAQ9NVD7 372 aa11.75□□□□□ -0.53
SCN1B-208ENST00000640135 PCDHB8Q9UN66 801 aa11.75□□□□□ -0.53
SCN1B-208ENST00000640135 CTSHP09668 335 aa11.74□□□□□ -0.53
SCN1B-208ENST00000640135 ATF7IP2Q5U623 682 aa11.74□□□□□ -0.53
SCN1B-208ENST00000640135 EFCAB12Q6NXP0 572 aa11.74□□□□□ -0.53
SCN1B-208ENST00000640135 TTC23LQ6PF05 361 aa11.74□□□□□ -0.53
SCN1B-208ENST00000640135 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.74□□□□□ -0.53
SCN1B-208ENST00000640135 TMEM143Q96AN5 459 aa11.74□□□□□ -0.53
SCN1B-208ENST00000640135 FAM163AQ96GL9 167 aaPredicted RBP11.74□□□□□ -0.53
SCN1B-208ENST00000640135 FSD1LQ9BXM9 530 aa11.74□□□□□ -0.53
SCN1B-208ENST00000640135 DYRK4Q9NR20 520 aa11.74□□□□□ -0.53
SCN1B-208ENST00000640135 CHEK2O96017 543 aa11.74□□□□□ -0.53
SCN1B-208ENST00000640135 TGFB3P10600 412 aa11.74□□□□□ -0.53
SCN1B-208ENST00000640135 GUCY1A2P33402 732 aa11.74□□□□□ -0.53
SCN1B-208ENST00000640135 SOX5P35711 763 aa11.74□□□□□ -0.53
SCN1B-208ENST00000640135 ACADSBP45954 432 aa11.74□□□□□ -0.53
SCN1B-208ENST00000640135 CDKL3Q8IVW4 592 aaPredicted RBP11.74□□□□□ -0.53
SCN1B-208ENST00000640135 RHOT1Q8IXI2 618 aa11.74□□□□□ -0.53
SCN1B-208ENST00000640135 MGARPQ8TDB4 240 aa11.74□□□□□ -0.53
SCN1B-208ENST00000640135 IQANK1A0A1B0GTG1 560 aa11.74□□□□□ -0.53
SCN1B-208ENST00000640135 CLTAP09496 248 aa11.74□□□□□ -0.53
SCN1B-208ENST00000640135 ARL4CP56559 192 aa11.74□□□□□ -0.53
SCN1B-208ENST00000640135 TROAPQ12815 778 aa11.74□□□□□ -0.53
SCN1B-208ENST00000640135 TAF1BQ53T94 588 aaPredicted RBP11.74□□□□□ -0.53
SCN1B-208ENST00000640135 PYROXD1Q8WU10 500 aa11.74□□□□□ -0.53
SCN1B-208ENST00000640135 COLEC11Q9BWP8 271 aa11.74□□□□□ -0.53
SCN1B-208ENST00000640135 EPB41L5Q9HCM4 733 aa11.74□□□□□ -0.53
SCN1B-208ENST00000640135 TRIM49BA6NDI0 452 aa11.74□□□□□ -0.53
SCN1B-208ENST00000640135 PP2D1A8MPX8 630 aa11.74□□□□□ -0.53
SCN1B-208ENST00000640135 ENC1O14682 589 aa11.74□□□□□ -0.53
SCN1B-208ENST00000640135 KRT37O76014 449 aa11.74□□□□□ -0.53
SCN1B-208ENST00000640135 RHOBTB3O94955 611 aa11.74□□□□□ -0.53
SCN1B-208ENST00000640135 SHC4Q6S5L8 630 aa11.74□□□□□ -0.53
SCN1B-208ENST00000640135 CLEC10AQ8IUN9 316 aa11.74□□□□□ -0.53
SCN1B-208ENST00000640135 ACRBPQ8NEB7 543 aa11.74□□□□□ -0.53
SCN1B-208ENST00000640135 SPDYE1Q8NFV5 336 aaPredicted RBP11.74□□□□□ -0.53
SCN1B-208ENST00000640135 SOCS4Q8WXH5 440 aa11.74□□□□□ -0.53
SCN1B-208ENST00000640135 HAUS8Q9BT25 410 aa11.74□□□□□ -0.53
SCN1B-208ENST00000640135 LRRC53A6NM62 1247 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms