RNA–Protein interactions for RNA: ENST00000637537.1

CLN5-219, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 4

Gene CLN5, Length 2,520 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-219ENST00000637537 TRIM50Q86XT4 487 aa20.29■□□□□ 0.84
CLN5-219ENST00000637537 FBXO16Q8IX29 292 aaPredicted RBP20.29■□□□□ 0.84
CLN5-219ENST00000637537 BICD1Q96G01 975 aa20.29■□□□□ 0.84
CLN5-219ENST00000637537 STK33Q9BYT3 514 aa20.29■□□□□ 0.84
CLN5-219ENST00000637537 NAGPAQ9UK23 515 aa20.29■□□□□ 0.84
CLN5-219ENST00000637537 CPP00450 1065 aa20.29■□□□□ 0.84
CLN5-219ENST00000637537 SOX5P35711 763 aa20.29■□□□□ 0.84
CLN5-219ENST00000637537 PRKCIP41743 596 aa20.29■□□□□ 0.84
CLN5-219ENST00000637537 STAT1P42224 750 aa20.29■□□□□ 0.84
CLN5-219ENST00000637537 MAP2K1Q02750 393 aaPredicted RBP20.29■□□□□ 0.84
CLN5-219ENST00000637537 KCTD2Q14681 263 aa20.29■□□□□ 0.84
CLN5-219ENST00000637537 HSDL1Q3SXM5 330 aa20.29■□□□□ 0.84
CLN5-219ENST00000637537 NFRKBQ6P4R8 1299 aa20.29■□□□□ 0.84
CLN5-219ENST00000637537 FASTKD5Q7L8L6 764 aaKnown RBP20.29■□□□□ 0.84
CLN5-219ENST00000637537 ARHGEF19Q8IW93 802 aa20.29■□□□□ 0.84
CLN5-219ENST00000637537 SLC17A8Q8NDX2 589 aa20.29■□□□□ 0.84
CLN5-219ENST00000637537 ASAP3Q8TDY4 903 aa20.29■□□□□ 0.84
CLN5-219ENST00000637537 COG1Q8WTW3 980 aa20.29■□□□□ 0.84
CLN5-219ENST00000637537 SLC10A4Q96EP9 437 aa20.29■□□□□ 0.84
CLN5-219ENST00000637537 IFT74Q96LB3 600 aa20.29■□□□□ 0.84
CLN5-219ENST00000637537 NOX5Q96PH1 765 aa20.29■□□□□ 0.84
CLN5-219ENST00000637537 ALS2CR12Q96Q35 445 aa20.29■□□□□ 0.84
CLN5-219ENST00000637537 MMP19Q99542 508 aa20.29■□□□□ 0.84
CLN5-219ENST00000637537 TMEM117Q9H0C3 514 aa20.29■□□□□ 0.84
CLN5-219ENST00000637537 SUGCTQ9HAC7 445 aa20.29■□□□□ 0.84
CLN5-219ENST00000637537 C17orf75Q9HAS0 396 aa20.29■□□□□ 0.84
CLN5-219ENST00000637537 TOPORSQ9NS56 1045 aaPredicted RBP20.29■□□□□ 0.84
CLN5-219ENST00000637537 ANO9A1A5B4 782 aa20.28■□□□□ 0.84
CLN5-219ENST00000637537 PDE2AO00408 941 aaPredicted RBP20.28■□□□□ 0.84
CLN5-219ENST00000637537 SLC25A27O95847 323 aa20.28■□□□□ 0.84
CLN5-219ENST00000637537 OSBPP22059 807 aa20.28■□□□□ 0.84
CLN5-219ENST00000637537 DNA2P51530 1060 aa20.28■□□□□ 0.84
CLN5-219ENST00000637537 ALKBH5Q6P6C2 394 aaKnown RBP20.28■□□□□ 0.84
CLN5-219ENST00000637537 UBE2TQ9NPD8 197 aaPredicted RBP20.28■□□□□ 0.84
CLN5-219ENST00000637537 BZW2Q9Y6E2 419 aaKnown RBP20.28■□□□□ 0.84
CLN5-219ENST00000637537 IGKV6D-21A0A0A0MT36 114 aa20.28■□□□□ 0.84
CLN5-219ENST00000637537 STAT5BP51692 787 aa20.28■□□□□ 0.84
CLN5-219ENST00000637537 CASP8Q14790 479 aa20.28■□□□□ 0.84
CLN5-219ENST00000637537 LDLRAD1Q5T700 205 aa20.28■□□□□ 0.84
CLN5-219ENST00000637537 TMEM174Q8WUU8 243 aa20.28■□□□□ 0.84
CLN5-219ENST00000637537 KAT5Q92993 513 aa20.28■□□□□ 0.84
CLN5-219ENST00000637537 ARHGAP28Q9P2N2 729 aa20.28■□□□□ 0.84
CLN5-219ENST00000637537 FOXN3O00409 490 aaPredicted RBP20.27■□□□□ 0.84
CLN5-219ENST00000637537 DDX3XO00571 662 aaKnown RBP eCLIP20.27■□□□□ 0.841e-8■■■□□ 16.6
CLN5-219ENST00000637537 PALMO75781 387 aa20.27■□□□□ 0.84
CLN5-219ENST00000637537 DRP2Q13474 957 aa20.27■□□□□ 0.84
CLN5-219ENST00000637537 NEDD9Q14511 834 aa20.27■□□□□ 0.84
CLN5-219ENST00000637537 NAB2Q15742 525 aa20.27■□□□□ 0.84
CLN5-219ENST00000637537 COPS5Q92905 334 aa20.27■□□□□ 0.84
CLN5-219ENST00000637537 NCAPGQ9BPX3 1015 aa20.27■□□□□ 0.84
CLN5-219ENST00000637537 DHX33Q9H6R0 707 aaKnown RBP20.27■□□□□ 0.84
CLN5-219ENST00000637537 SNX12Q9UMY4 172 aa20.27■□□□□ 0.84
CLN5-219ENST00000637537 LRRIQ4A6NIV6 560 aa20.27■□□□□ 0.84
CLN5-219ENST00000637537 TMCO5BA8MYB1 307 aa20.27■□□□□ 0.84
CLN5-219ENST00000637537 CHRM1P11229 460 aaPredicted RBP20.27■□□□□ 0.84
CLN5-219ENST00000637537 MXI1P50539 228 aa20.27■□□□□ 0.84
CLN5-219ENST00000637537 ERVK-9P63128 1117 aa20.27■□□□□ 0.84
CLN5-219ENST00000637537 SNAPC2Q13487 334 aa20.27■□□□□ 0.84
CLN5-219ENST00000637537 GLYCTKQ8IVS8 523 aa20.27■□□□□ 0.84
CLN5-219ENST00000637537 SLC7A3Q8WY07 619 aa20.27■□□□□ 0.84
CLN5-219ENST00000637537 CEP89Q96ST8 783 aa20.27■□□□□ 0.84
CLN5-219ENST00000637537 GOLPH3Q9H4A6 298 aa20.27■□□□□ 0.84
CLN5-219ENST00000637537 LUC7LQ9NQ29 371 aaKnown RBP20.27■□□□□ 0.84
CLN5-219ENST00000637537 SMARCAL1Q9NZC9 954 aa20.27■□□□□ 0.84
CLN5-219ENST00000637537 PACSIN2Q9UNF0 486 aaPredicted RBP20.27■□□□□ 0.84
CLN5-219ENST00000637537 ZNFX1Q9P2E3 1918 aaKnown RBP20.26■□□□□ 0.83
CLN5-219ENST00000637537 FTCDO95954 541 aa20.26■□□□□ 0.83
CLN5-219ENST00000637537 DLATP10515 647 aaKnown RBP20.26■□□□□ 0.83
CLN5-219ENST00000637537 GLRA2P23416 452 aa20.26■□□□□ 0.83
CLN5-219ENST00000637537 PTPROQ16827 1216 aa20.26■□□□□ 0.83
CLN5-219ENST00000637537 EPC2Q52LR7 807 aa20.26■□□□□ 0.83
CLN5-219ENST00000637537 METTL7BQ6UX53 244 aa20.26■□□□□ 0.83
CLN5-219ENST00000637537 OLIG1Q8TAK6 271 aa20.26■□□□□ 0.83
CLN5-219ENST00000637537 PARD3BQ8TEW8 1205 aa20.26■□□□□ 0.83
CLN5-219ENST00000637537 FAM213AQ9BRX8 229 aa20.26■□□□□ 0.83
CLN5-219ENST00000637537 MED4Q9NPJ6 270 aa20.26■□□□□ 0.83
CLN5-219ENST00000637537 EHD2Q9NZN4 543 aa20.26■□□□□ 0.83
CLN5-219ENST00000637537 LRRIQ3A6PVS8 624 aaPredicted RBP20.26■□□□□ 0.83
CLN5-219ENST00000637537 FERP16591 822 aa20.26■□□□□ 0.83
CLN5-219ENST00000637537 VSNL1P62760 191 aa20.26■□□□□ 0.83
CLN5-219ENST00000637537 SUGP1Q8IWZ8 645 aaKnown RBP20.26■□□□□ 0.83
CLN5-219ENST00000637537 LNX1Q8TBB1 728 aaPredicted RBP20.26■□□□□ 0.83
CLN5-219ENST00000637537 CAGE1Q8TC20 777 aa20.26■□□□□ 0.83
CLN5-219ENST00000637537 U2AF1L4Q8WU68 220 aaKnown RBP20.26■□□□□ 0.83
CLN5-219ENST00000637537 SEMA4DQ92854 862 aa20.26■□□□□ 0.83
CLN5-219ENST00000637537 TLR10Q9BXR5 811 aa20.26■□□□□ 0.83
CLN5-219ENST00000637537 PDGFCQ9NRA1 345 aa20.26■□□□□ 0.83
CLN5-219ENST00000637537 DNAJC25-GNG10A0A024R161 153 aa20.25■□□□□ 0.83
CLN5-219ENST00000637537 IQCA1LA6NCM1 817 aa20.25■□□□□ 0.83
CLN5-219ENST00000637537 RTP1P59025 263 aa20.25■□□□□ 0.83
CLN5-219ENST00000637537 SNRPFP62306 86 aaKnown RBP20.25■□□□□ 0.83
CLN5-219ENST00000637537 HSP90B2PQ58FF3 399 aa20.25■□□□□ 0.83
CLN5-219ENST00000637537 RNF10Q8N5U6 811 aaKnown RBP20.25■□□□□ 0.83
CLN5-219ENST00000637537 SEPT1Q8WYJ6 367 aa20.25■□□□□ 0.83
CLN5-219ENST00000637537 GLG1Q92896 1179 aa20.25■□□□□ 0.83
CLN5-219ENST00000637537 HVCN1Q96D96 273 aa20.25■□□□□ 0.83
CLN5-219ENST00000637537 LRRC37A2A6NM11 1700 aa20.25■□□□□ 0.83
CLN5-219ENST00000637537 PPFIA4O75335 1185 aa20.25■□□□□ 0.83
CLN5-219ENST00000637537 TUBBP07437 444 aa20.25■□□□□ 0.83
CLN5-219ENST00000637537 TGFB3P10600 412 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms