RNA–Protein interactions for RNA: ENST00000637297.1

CACNA1A-239, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 637 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-239ENST00000637297 KBTBD4Q9NVX7 518 aa10.11□□□□□ -0.79
CACNA1A-239ENST00000637297 TMEM161AQ9NX61 479 aa10.11□□□□□ -0.79
CACNA1A-239ENST00000637297 SEL1LQ9UBV2 794 aa10.11□□□□□ -0.79
CACNA1A-239ENST00000637297 HOOK1Q9UJC3 728 aaKnown RBP10.11□□□□□ -0.79
CACNA1A-239ENST00000637297 HPSEQ9Y251 543 aa10.11□□□□□ -0.79
CACNA1A-239ENST00000637297 FNDC1Q4ZHG4 1894 aaPredicted RBP10.1□□□□□ -0.79
CACNA1A-239ENST00000637297 N4BP3O15049 544 aa10.1□□□□□ -0.79
CACNA1A-239ENST00000637297 B4GALT5O43286 388 aa10.1□□□□□ -0.79
CACNA1A-239ENST00000637297 MYOGP15173 224 aa10.1□□□□□ -0.79
CACNA1A-239ENST00000637297 SCP2P22307 547 aa10.1□□□□□ -0.79
CACNA1A-239ENST00000637297 MATR3P43243 847 aaKnown RBP eCLIP10.1□□□□□ -0.79
CACNA1A-239ENST00000637297 ZNF131P52739 623 aa10.1□□□□□ -0.79
CACNA1A-239ENST00000637297 BTG3Q14201 252 aaPredicted RBP10.1□□□□□ -0.79
CACNA1A-239ENST00000637297 STX1AQ16623 288 aa10.1□□□□□ -0.79
CACNA1A-239ENST00000637297 LONRF3Q496Y0 759 aa10.1□□□□□ -0.79
CACNA1A-239ENST00000637297 SPOUT1Q5T280 376 aaKnown RBP10.1□□□□□ -0.79
CACNA1A-239ENST00000637297 ATF7IP2Q5U623 682 aa10.1□□□□□ -0.79
CACNA1A-239ENST00000637297 PPP2R2DQ66LE6 453 aa10.1□□□□□ -0.79
CACNA1A-239ENST00000637297 KANK3Q6NY19 840 aa10.1□□□□□ -0.79
CACNA1A-239ENST00000637297 SLC27A1Q6PCB7 646 aa10.1□□□□□ -0.79
CACNA1A-239ENST00000637297 PPP4R3CPQ6ZMV5 832 aa10.1□□□□□ -0.79
CACNA1A-239ENST00000637297 STXBP4Q6ZWJ1 553 aa10.1□□□□□ -0.79
CACNA1A-239ENST00000637297 HAUS6Q7Z4H7 955 aa10.1□□□□□ -0.79
CACNA1A-239ENST00000637297 SFR1Q86XK3 245 aa10.1□□□□□ -0.79
CACNA1A-239ENST00000637297 ECHDC2Q86YB7 292 aa10.1□□□□□ -0.79
CACNA1A-239ENST00000637297 CCDC47Q96A33 483 aaKnown RBP10.1□□□□□ -0.79
CACNA1A-239ENST00000637297 PPP1R9BQ96SB3 815 aa10.1□□□□□ -0.79
CACNA1A-239ENST00000637297 C7orf25Q9BPX7 421 aa10.1□□□□□ -0.79
CACNA1A-239ENST00000637297 MRPL4Q9BYD3 311 aaKnown RBP10.1□□□□□ -0.79
CACNA1A-239ENST00000637297 TRIM9Q9C026 710 aa10.1□□□□□ -0.79
CACNA1A-239ENST00000637297 BLZF1Q9H2G9 400 aa10.1□□□□□ -0.79
CACNA1A-239ENST00000637297 ANO10Q9NW15 660 aa10.1□□□□□ -0.79
CACNA1A-239ENST00000637297 TBC1D7Q9P0N9 293 aa10.1□□□□□ -0.79
CACNA1A-239ENST00000637297 ARHGAP28Q9P2N2 729 aa10.1□□□□□ -0.79
CACNA1A-239ENST00000637297 PCDHB2Q9Y5E7 798 aa10.1□□□□□ -0.79
CACNA1A-239ENST00000637297 NLRC5Q86WI3 1866 aa10.1□□□□□ -0.79
CACNA1A-239ENST00000637297 ADGRA3Q8IWK6 1321 aa10.09□□□□□ -0.79
CACNA1A-239ENST00000637297 CNTNAP2Q9UHC6 1331 aa10.09□□□□□ -0.79
CACNA1A-239ENST00000637297 TRIP11Q15643 1979 aa10.09□□□□□ -0.79
CACNA1A-239ENST00000637297 A0A1B0GUA9 196 aa10.09□□□□□ -0.79
CACNA1A-239ENST00000637297 TBKBP1A7MCY6 615 aa10.09□□□□□ -0.79
CACNA1A-239ENST00000637297 SOX1O00570 391 aaPredicted RBP10.09□□□□□ -0.79
CACNA1A-239ENST00000637297 DGKIO75912 1065 aa10.09□□□□□ -0.79
CACNA1A-239ENST00000637297 GCNT3O95395 438 aa10.09□□□□□ -0.79
CACNA1A-239ENST00000637297 NPTXRO95502 500 aa10.09□□□□□ -0.79
CACNA1A-239ENST00000637297 CA3P07451 260 aa10.09□□□□□ -0.79
CACNA1A-239ENST00000637297 MAPTP10636 758 aaKnown RBP10.09□□□□□ -0.79
CACNA1A-239ENST00000637297 ITGA4P13612 1032 aa10.09□□□□□ -0.79
CACNA1A-239ENST00000637297 NMT1P30419 496 aaKnown RBP10.09□□□□□ -0.79
CACNA1A-239ENST00000637297 HOXA11P31270 313 aaPredicted RBP10.09□□□□□ -0.79
CACNA1A-239ENST00000637297 NCKAP1LP55160 1127 aa10.09□□□□□ -0.79
CACNA1A-239ENST00000637297 FAM189BP81408 668 aa10.09□□□□□ -0.79
CACNA1A-239ENST00000637297 AMHR2Q16671 573 aa10.09□□□□□ -0.79
CACNA1A-239ENST00000637297 ANO6Q4KMQ2 910 aa10.09□□□□□ -0.79
CACNA1A-239ENST00000637297 PAN2Q504Q3 1202 aaKnown RBP10.09□□□□□ -0.79
CACNA1A-239ENST00000637297 CDR2LQ86X02 465 aaPredicted RBP10.09□□□□□ -0.79
CACNA1A-239ENST00000637297 FIBCD1Q8N539 461 aa10.09□□□□□ -0.79
CACNA1A-239ENST00000637297 TMEM161BQ8NDZ6 487 aa10.09□□□□□ -0.79
CACNA1A-239ENST00000637297 DNAJC19Q96DA6 116 aa10.09□□□□□ -0.79
CACNA1A-239ENST00000637297 TRIM44Q96DX7 344 aaPredicted RBP10.09□□□□□ -0.79
CACNA1A-239ENST00000637297 PAGE5Q96GU1 130 aa10.09□□□□□ -0.79
CACNA1A-239ENST00000637297 TRAIPQ9BWF2 469 aa10.09□□□□□ -0.79
CACNA1A-239ENST00000637297 APOL6Q9BWW8 343 aa10.09□□□□□ -0.79
CACNA1A-239ENST00000637297 NAT10Q9H0A0 1025 aaKnown RBP10.09□□□□□ -0.79
CACNA1A-239ENST00000637297 CCDC113Q9H0I3 377 aa10.09□□□□□ -0.79
CACNA1A-239ENST00000637297 USP20Q9Y2K6 914 aa10.09□□□□□ -0.79
CACNA1A-239ENST00000637297 PCDHB13Q9Y5F0 798 aa10.09□□□□□ -0.79
CACNA1A-239ENST00000637297 TDRD15B5MCY1 1934 aaKnown RBP10.09□□□□□ -0.79
CACNA1A-239ENST00000637297 CITO14578 2027 aa10.08□□□□□ -0.8
CACNA1A-239ENST00000637297 TMEM265A0A087WTH1 108 aa10.08□□□□□ -0.8
CACNA1A-239ENST00000637297 ACTN4O43707 911 aaKnown RBP10.08□□□□□ -0.8
CACNA1A-239ENST00000637297 ZNF623O75123 536 aa10.08□□□□□ -0.8
CACNA1A-239ENST00000637297 MYL1P05976 194 aa10.08□□□□□ -0.8
CACNA1A-239ENST00000637297 FGFR1P11362 822 aa10.08□□□□□ -0.8
CACNA1A-239ENST00000637297 LIG4P49917 911 aa10.08□□□□□ -0.8
CACNA1A-239ENST00000637297 FXR1P51114 621 aaKnown RBP eCLIP10.08□□□□□ -0.8
CACNA1A-239ENST00000637297 HTRA4P83105 476 aaPredicted RBP10.08□□□□□ -0.8
CACNA1A-239ENST00000637297 COASYQ13057 564 aa10.08□□□□□ -0.8
CACNA1A-239ENST00000637297 CUL4BQ13620 913 aa10.08□□□□□ -0.8
CACNA1A-239ENST00000637297 DCAF4L1Q3SXM0 396 aa10.08□□□□□ -0.8
CACNA1A-239ENST00000637297 NT5DC1Q5TFE4 455 aa10.08□□□□□ -0.8
CACNA1A-239ENST00000637297 GPR153Q6NV75 609 aa10.08□□□□□ -0.8
CACNA1A-239ENST00000637297 GLB1LQ6UWU2 654 aa10.08□□□□□ -0.8
CACNA1A-239ENST00000637297 KRBA2Q6ZNG9 492 aa10.08□□□□□ -0.8
CACNA1A-239ENST00000637297 UNC13DQ70J99 1090 aa10.08□□□□□ -0.8
CACNA1A-239ENST00000637297 ZNF720Q7Z2F6 126 aa10.08□□□□□ -0.8
CACNA1A-239ENST00000637297 ZBTB33Q86T24 672 aa10.08□□□□□ -0.8
CACNA1A-239ENST00000637297 ELOA2Q8IYF1 753 aaPredicted RBP10.08□□□□□ -0.8
CACNA1A-239ENST00000637297 GRAMD1CQ8IYS0 662 aa10.08□□□□□ -0.8
CACNA1A-239ENST00000637297 CMTR2Q8IYT2 770 aaKnown RBP10.08□□□□□ -0.8
CACNA1A-239ENST00000637297 SYCP3Q8IZU3 236 aa10.08□□□□□ -0.8
CACNA1A-239ENST00000637297 URGCPQ8TCY9 931 aa10.08□□□□□ -0.8
CACNA1A-239ENST00000637297 HELQQ8TDG4 1101 aa10.08□□□□□ -0.8
CACNA1A-239ENST00000637297 LPPQ93052 612 aa10.08□□□□□ -0.8
CACNA1A-239ENST00000637297 FAM161BQ96MY7 647 aa10.08□□□□□ -0.8
CACNA1A-239ENST00000637297 ACO2Q99798 780 aaKnown RBP10.08□□□□□ -0.8
CACNA1A-239ENST00000637297 TARS2Q9BW92 718 aaKnown RBP10.08□□□□□ -0.8
CACNA1A-239ENST00000637297 EIF2AQ9BY44 585 aaKnown RBP10.08□□□□□ -0.8
CACNA1A-239ENST00000637297 TMEM117Q9H0C3 514 aa10.08□□□□□ -0.8
CACNA1A-239ENST00000637297 PDZD7Q9H5P4 517 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms