RNA–Protein interactions for RNA: ENST00000622143.1

SRSF4-207, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 2

Gene SRSF4, Length 614 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-207ENST00000622143 DLX2Q07687 328 aaPredicted RBP5.82□□□□□ -1.48
SRSF4-207ENST00000622143 SLBPQ14493 270 aaKnown RBP eCLIP5.82□□□□□ -1.48
SRSF4-207ENST00000622143 PRAMEF13Q5VWM6 474 aa5.82□□□□□ -1.48
SRSF4-207ENST00000622143 FBXW10Q5XX13 1052 aa5.82□□□□□ -1.48
SRSF4-207ENST00000622143 OVOS1Q6IE37 1185 aa5.82□□□□□ -1.48
SRSF4-207ENST00000622143 MAMDC4Q6UXC1 1216 aa5.82□□□□□ -1.48
SRSF4-207ENST00000622143 TMEM179Q6ZVK1 233 aa5.82□□□□□ -1.48
SRSF4-207ENST00000622143 RPAINQ86UA6 219 aa5.82□□□□□ -1.48
SRSF4-207ENST00000622143 REXO1Q8N1G1 1221 aaKnown RBP5.82□□□□□ -1.48
SRSF4-207ENST00000622143 TOP6BLQ8N6T0 577 aa5.82□□□□□ -1.48
SRSF4-207ENST00000622143 FAM13CQ8NE31 585 aa5.82□□□□□ -1.48
SRSF4-207ENST00000622143 TMEM87BQ96K49 555 aa5.82□□□□□ -1.48
SRSF4-207ENST00000622143 TGS1Q96RS0 853 aaKnown RBP5.82□□□□□ -1.48
SRSF4-207ENST00000622143 KATNBL1Q9H079 304 aa5.82□□□□□ -1.48
SRSF4-207ENST00000622143 CCDC8Q9H0W5 538 aaPredicted RBP5.82□□□□□ -1.48
SRSF4-207ENST00000622143 EHMT1Q9H9B1 1298 aa5.82□□□□□ -1.48
SRSF4-207ENST00000622143 RALYQ9UKM9 306 aaKnown RBP5.82□□□□□ -1.48
SRSF4-207ENST00000622143 ADAMTS5Q9UNA0 930 aa5.82□□□□□ -1.48
SRSF4-207ENST00000622143 TMX2Q9Y320 296 aa5.82□□□□□ -1.48
SRSF4-207ENST00000622143 CTDP1Q9Y5B0 961 aaPredicted RBP5.82□□□□□ -1.48
SRSF4-207ENST00000622143 ZFHX2Q9C0A1 2572 aaPredicted RBP5.82□□□□□ -1.48
SRSF4-207ENST00000622143 PLXNA3P51805 1871 aa5.81□□□□□ -1.48
SRSF4-207ENST00000622143 SIP14410 1827 aa5.81□□□□□ -1.48
SRSF4-207ENST00000622143 STXBP3O00186 592 aa5.81□□□□□ -1.48
SRSF4-207ENST00000622143 LINC01565O15544 149 aa5.81□□□□□ -1.48
SRSF4-207ENST00000622143 PRKAB2O43741 272 aa5.81□□□□□ -1.48
SRSF4-207ENST00000622143 ZEB2O60315 1214 aa5.81□□□□□ -1.48
SRSF4-207ENST00000622143 CABYRO75952 493 aa5.81□□□□□ -1.48
SRSF4-207ENST00000622143 ATE1O95260 518 aa5.81□□□□□ -1.48
SRSF4-207ENST00000622143 PDGFBP01127 241 aaPredicted RBP5.81□□□□□ -1.48
SRSF4-207ENST00000622143 PRNPP04156 253 aa5.81□□□□□ -1.48
SRSF4-207ENST00000622143 PFKMP08237 780 aa5.81□□□□□ -1.48
SRSF4-207ENST00000622143 ATF4P18848 351 aaPredicted RBP5.81□□□□□ -1.48
SRSF4-207ENST00000622143 ERVK-21P61565 698 aa5.81□□□□□ -1.48
SRSF4-207ENST00000622143 ARID5AQ03989 594 aa5.81□□□□□ -1.48
SRSF4-207ENST00000622143 G3BP1Q13283 466 aaKnown RBP eCLIP5.81□□□□□ -1.48
SRSF4-207ENST00000622143 OS9Q13438 667 aaPredicted RBP5.81□□□□□ -1.48
SRSF4-207ENST00000622143 COL9A2Q14055 689 aaPredicted RBP5.81□□□□□ -1.48
SRSF4-207ENST00000622143 CCDC158Q5M9N0 1113 aa5.81□□□□□ -1.48
SRSF4-207ENST00000622143 TMEM201Q5SNT2 666 aa5.81□□□□□ -1.48
SRSF4-207ENST00000622143 LIN28BQ6ZN17 250 aaKnown RBP eCLIP5.81□□□□□ -1.483e-7■□□□□ 9.9
SRSF4-207ENST00000622143 MRPL41Q8IXM3 137 aaKnown RBP5.81□□□□□ -1.48
SRSF4-207ENST00000622143 LCORLQ8N3X6 602 aa5.81□□□□□ -1.48
SRSF4-207ENST00000622143 FAM133AQ8N9E0 248 aa5.81□□□□□ -1.48
SRSF4-207ENST00000622143 PHOSPHO2Q8TCD6 241 aa5.81□□□□□ -1.48
SRSF4-207ENST00000622143 EDAQ92838 391 aa5.81□□□□□ -1.48
SRSF4-207ENST00000622143 DRC1Q96MC2 740 aa5.81□□□□□ -1.48
SRSF4-207ENST00000622143 SLF1Q9BQI6 1058 aa5.81□□□□□ -1.48
SRSF4-207ENST00000622143 TEX13BQ9BXU2 312 aa5.81□□□□□ -1.48
SRSF4-207ENST00000622143 SH2D4AQ9H788 454 aa5.81□□□□□ -1.48
SRSF4-207ENST00000622143 ALG13Q9NP73 1137 aaKnown RBP5.81□□□□□ -1.48
SRSF4-207ENST00000622143 SMC4Q9NTJ3 1288 aa5.81□□□□□ -1.48
SRSF4-207ENST00000622143 BRWD1Q9NSI6 2320 aa5.81□□□□□ -1.48
SRSF4-207ENST00000622143 MYH8P13535 1937 aa5.8□□□□□ -1.48
SRSF4-207ENST00000622143 PNMA6EA0A0J9YXQ4 647 aa5.8□□□□□ -1.48
SRSF4-207ENST00000622143 PRR23AA6NEV1 266 aa5.8□□□□□ -1.48
SRSF4-207ENST00000622143 UPK3BL1B0FP48 263 aa5.8□□□□□ -1.48
SRSF4-207ENST00000622143 UPK3BL2E5RIL1 263 aa5.8□□□□□ -1.48
SRSF4-207ENST00000622143 MBTPS2O43462 519 aa5.8□□□□□ -1.48
SRSF4-207ENST00000622143 ZBED4O75132 1171 aa5.8□□□□□ -1.48
SRSF4-207ENST00000622143 LRIG2O94898 1065 aa5.8□□□□□ -1.48
SRSF4-207ENST00000622143 CST3P01034 146 aaPredicted RBP5.8□□□□□ -1.48
SRSF4-207ENST00000622143 SP100P23497 879 aaPredicted RBP5.8□□□□□ -1.48
SRSF4-207ENST00000622143 COPB2P35606 906 aa5.8□□□□□ -1.48
SRSF4-207ENST00000622143 LTBRP36941 435 aa5.8□□□□□ -1.48
SRSF4-207ENST00000622143 GPM6BQ13491 265 aa5.8□□□□□ -1.48
SRSF4-207ENST00000622143 GPNMBQ14956 572 aa5.8□□□□□ -1.48
SRSF4-207ENST00000622143 TNNI3KQ59H18 835 aa5.8□□□□□ -1.48
SRSF4-207ENST00000622143 HERC4Q5GLZ8 1057 aaPredicted RBP5.8□□□□□ -1.48
SRSF4-207ENST00000622143 LCE4AQ5TA78 99 aa5.8□□□□□ -1.48
SRSF4-207ENST00000622143 OGFOD3Q6PK18 319 aa5.8□□□□□ -1.48
SRSF4-207ENST00000622143 FRMD5Q7Z6J6 570 aa5.8□□□□□ -1.48
SRSF4-207ENST00000622143 MCATQ8IVS2 390 aaKnown RBP5.8□□□□□ -1.48
SRSF4-207ENST00000622143 MYOCDQ8IZQ8 938 aa5.8□□□□□ -1.48
SRSF4-207ENST00000622143 MSL3Q8N5Y2 521 aaKnown RBP5.8□□□□□ -1.48
SRSF4-207ENST00000622143 SREK1Q8WXA9 508 aaKnown RBP5.8□□□□□ -1.48
SRSF4-207ENST00000622143 COPS5Q92905 334 aa5.8□□□□□ -1.48
SRSF4-207ENST00000622143 PABPC5Q96DU9 382 aaKnown RBP5.8□□□□□ -1.48
SRSF4-207ENST00000622143 MRPL38Q96DV4 380 aaKnown RBP5.8□□□□□ -1.48
SRSF4-207ENST00000622143 SEC16BQ96JE7 1060 aa5.8□□□□□ -1.48
SRSF4-207ENST00000622143 MIPEPQ99797 713 aa5.8□□□□□ -1.48
SRSF4-207ENST00000622143 RIOK1Q9BRS2 568 aaKnown RBP5.8□□□□□ -1.48
SRSF4-207ENST00000622143 FSD1Q9BTV5 496 aa5.8□□□□□ -1.48
SRSF4-207ENST00000622143 UPF3BQ9BZI7 483 aaKnown RBP5.8□□□□□ -1.48
SRSF4-207ENST00000622143 FOXQ1Q9C009 403 aa5.8□□□□□ -1.48
SRSF4-207ENST00000622143 ARMT1Q9H993 441 aa5.8□□□□□ -1.48
SRSF4-207ENST00000622143 LMCD1Q9NZU5 365 aa5.8□□□□□ -1.48
SRSF4-207ENST00000622143 GMIPQ9P107 970 aa5.8□□□□□ -1.48
SRSF4-207ENST00000622143 NOB1Q9ULX3 412 aaKnown RBP5.8□□□□□ -1.48
SRSF4-207ENST00000622143 TNNQ9UQP3 1299 aa5.8□□□□□ -1.48
SRSF4-207ENST00000622143 FPGT-TNNI3KV9GXZ4 949 aa5.8□□□□□ -1.48
SRSF4-207ENST00000622143 C5orf42Q9H799 3197 aa5.79□□□□□ -1.48
SRSF4-207ENST00000622143 ZDBF2Q9HCK1 2354 aa5.79□□□□□ -1.48
SRSF4-207ENST00000622143 TECTAO75443 2155 aa5.79□□□□□ -1.48
SRSF4-207ENST00000622143 CHURC1-FNTBB4DL54 471 aa5.79□□□□□ -1.48
SRSF4-207ENST00000622143 SMARCA5O60264 1052 aaPredicted RBP5.79□□□□□ -1.48
SRSF4-207ENST00000622143 NBNO60934 754 aa5.79□□□□□ -1.48
SRSF4-207ENST00000622143 TBX10O75333 385 aa5.79□□□□□ -1.48
SRSF4-207ENST00000622143 LEFTY1O75610 366 aa5.79□□□□□ -1.48
SRSF4-207ENST00000622143 BAIAP3O94812 1187 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 126.6 ms