RNA–Protein interactions for RNA: ENST00000618548.4

PCSK6-217, Transcript of proprotein convertase subtilisin/kexin type 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCSK6, Length 4,269 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCSK6-217ENST00000618548 PNMA5Q96PV4 448 aa21.89■■□□□ 1.1
PCSK6-217ENST00000618548 MRPL47Q9HD33 250 aaKnown RBP21.89■■□□□ 1.1
PCSK6-217ENST00000618548 ATP2B4P23634 1241 aa21.89■■□□□ 1.09
PCSK6-217ENST00000618548 ITGA8P53708 1063 aa21.89■■□□□ 1.09
PCSK6-217ENST00000618548 PTENP60484 403 aa21.89■■□□□ 1.09
PCSK6-217ENST00000618548 TEX9Q8N6V9 391 aa21.89■■□□□ 1.09
PCSK6-217ENST00000618548 TRIM11Q96F44 468 aa21.89■■□□□ 1.09
PCSK6-217ENST00000618548 CENPKQ9BS16 269 aa21.89■■□□□ 1.09
PCSK6-217ENST00000618548 FAM196BA6NMK8 535 aa21.89■■□□□ 1.09
PCSK6-217ENST00000618548 XXYLT1Q8NBI6 393 aa21.89■■□□□ 1.09
PCSK6-217ENST00000618548 ATL2Q8NHH9 583 aa21.89■■□□□ 1.09
PCSK6-217ENST00000618548 C11orf70Q9BRQ4 267 aa21.89■■□□□ 1.09
PCSK6-217ENST00000618548 TRAIPQ9BWF2 469 aa21.89■■□□□ 1.09
PCSK6-217ENST00000618548 CDC42EP4Q9H3Q1 356 aaKnown RBP21.89■■□□□ 1.09
PCSK6-217ENST00000618548 SIGLEC1Q9BZZ2 1709 aa21.89■■□□□ 1.09
PCSK6-217ENST00000618548 KCNA3P22001 575 aa21.89■■□□□ 1.09
PCSK6-217ENST00000618548 PDIK1LQ8N165 341 aa21.89■■□□□ 1.09
PCSK6-217ENST00000618548 PPP4R1Q8TF05 950 aa21.89■■□□□ 1.09
PCSK6-217ENST00000618548 RTN2O75298 545 aa21.88■■□□□ 1.09
PCSK6-217ENST00000618548 ZWINTO95229 277 aa21.88■■□□□ 1.09
PCSK6-217ENST00000618548 KLRK1P26718 216 aa21.88■■□□□ 1.09
PCSK6-217ENST00000618548 LIG4P49917 911 aa21.88■■□□□ 1.09
PCSK6-217ENST00000618548 PDIA2Q13087 525 aaKnown RBP21.88■■□□□ 1.09
PCSK6-217ENST00000618548 C1orf146Q5VVC0 180 aa21.88■■□□□ 1.09
PCSK6-217ENST00000618548 KCNK18Q7Z418 384 aa21.88■■□□□ 1.09
PCSK6-217ENST00000618548 ATP2A3Q93084 1043 aa21.88■■□□□ 1.09
PCSK6-217ENST00000618548 EIF2AK1Q9BQI3 630 aaKnown RBP21.88■■□□□ 1.09
PCSK6-217ENST00000618548 WDR11Q9BZH6 1224 aa21.88■■□□□ 1.09
PCSK6-217ENST00000618548 DCDC2CA8MYV0 355 aa21.88■■□□□ 1.09
PCSK6-217ENST00000618548 AKAP3O75969 853 aa21.88■■□□□ 1.09
PCSK6-217ENST00000618548 TMPRSS15P98073 1019 aa21.88■■□□□ 1.09
PCSK6-217ENST00000618548 FUT2Q10981 343 aa21.88■■□□□ 1.09
PCSK6-217ENST00000618548 HADHQ16836 314 aaKnown RBP21.88■■□□□ 1.09
PCSK6-217ENST00000618548 BRDTQ58F21 947 aaPredicted RBP21.88■■□□□ 1.09
PCSK6-217ENST00000618548 SMYD3Q9H7B4 428 aa21.88■■□□□ 1.09
PCSK6-217ENST00000618548 ADAM22Q9P0K1 906 aa21.88■■□□□ 1.09
PCSK6-217ENST00000618548 SRRM3A6NNA2 597 aaPredicted RBP21.87■■□□□ 1.09
PCSK6-217ENST00000618548 KITP10721 976 aa21.87■■□□□ 1.09
PCSK6-217ENST00000618548 MARK3P27448 753 aa21.87■■□□□ 1.09
PCSK6-217ENST00000618548 PEX3P56589 373 aa21.87■■□□□ 1.09
PCSK6-217ENST00000618548 PPP2R5DQ14738 602 aa21.87■■□□□ 1.09
PCSK6-217ENST00000618548 SLC13A5Q86YT5 568 aaPredicted RBP21.87■■□□□ 1.09
PCSK6-217ENST00000618548 BTBD6Q96KE9 485 aa21.87■■□□□ 1.09
PCSK6-217ENST00000618548 FAM20AQ96MK3 541 aa21.87■■□□□ 1.09
PCSK6-217ENST00000618548 SERPINB12Q96P63 405 aa21.87■■□□□ 1.09
PCSK6-217ENST00000618548 PURBQ96QR8 312 aaKnown RBP21.87■■□□□ 1.09
PCSK6-217ENST00000618548 CREB3O43889 395 aa21.87■■□□□ 1.09
PCSK6-217ENST00000618548 GNAT1P11488 350 aa21.87■■□□□ 1.09
PCSK6-217ENST00000618548 PIK3CAP42336 1068 aa21.87■■□□□ 1.09
PCSK6-217ENST00000618548 DMP1Q13316 513 aaPredicted RBP21.87■■□□□ 1.09
PCSK6-217ENST00000618548 MTM1Q13496 603 aa21.87■■□□□ 1.09
PCSK6-217ENST00000618548 NT5DC3Q86UY8 548 aa21.87■■□□□ 1.09
PCSK6-217ENST00000618548 NWD1Q149M9 1564 aa21.87■■□□□ 1.09
PCSK6-217ENST00000618548 hCG_2014768A0A024R1R8 64 aa21.87■■□□□ 1.09
PCSK6-217ENST00000618548 RSPH10B2B2RC85 870 aa21.87■■□□□ 1.09
PCSK6-217ENST00000618548 H7C0C1 242 aa21.87■■□□□ 1.09
PCSK6-217ENST00000618548 RSPH10BP0C881 870 aa21.87■■□□□ 1.09
PCSK6-217ENST00000618548 ATP5OP48047 213 aa21.87■■□□□ 1.09
PCSK6-217ENST00000618548 ANKRD20A2Q5SQ80 823 aa21.87■■□□□ 1.09
PCSK6-217ENST00000618548 ANKRD20A1Q5TYW2 823 aa21.87■■□□□ 1.09
PCSK6-217ENST00000618548 CDCA7Q9BWT1 371 aaPredicted RBP21.87■■□□□ 1.09
PCSK6-217ENST00000618548 IFT122Q9HBG6 1241 aa21.87■■□□□ 1.09
PCSK6-217ENST00000618548 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.87■■□□□ 1.09
PCSK6-217ENST00000618548 TNS3Q68CZ2 1445 aa21.87■■□□□ 1.09
PCSK6-217ENST00000618548 PGM1P36871 562 aa21.86■■□□□ 1.09
PCSK6-217ENST00000618548 AP3B2Q13367 1082 aa21.86■■□□□ 1.09
PCSK6-217ENST00000618548 LRP10Q7Z4F1 713 aa21.86■■□□□ 1.09
PCSK6-217ENST00000618548 MORC4Q8TE76 937 aa21.86■■□□□ 1.09
PCSK6-217ENST00000618548 ATG4AQ8WYN0 398 aa21.86■■□□□ 1.09
PCSK6-217ENST00000618548 TESPA1A2RU30 521 aaPredicted RBP21.86■■□□□ 1.09
PCSK6-217ENST00000618548 FOXN3O00409 490 aaPredicted RBP21.86■■□□□ 1.09
PCSK6-217ENST00000618548 SLC16A3O15427 465 aaKnown RBP21.86■■□□□ 1.09
PCSK6-217ENST00000618548 CYTH3O43739 400 aa21.86■■□□□ 1.09
PCSK6-217ENST00000618548 TRPA1O75762 1119 aa21.86■■□□□ 1.09
PCSK6-217ENST00000618548 SERPINB4P48594 390 aa21.86■■□□□ 1.09
PCSK6-217ENST00000618548 BTNL9Q6UXG8 535 aa21.86■■□□□ 1.09
PCSK6-217ENST00000618548 SMIM5Q71RC9 77 aa21.86■■□□□ 1.09
PCSK6-217ENST00000618548 ANKMY2Q8IV38 441 aa21.86■■□□□ 1.09
PCSK6-217ENST00000618548 ZBTB12Q9Y330 459 aaPredicted RBP21.86■■□□□ 1.09
PCSK6-217ENST00000618548 EPHB1P54762 984 aa21.86■■□□□ 1.09
PCSK6-217ENST00000618548 LRRC36Q1X8D7 754 aa21.86■■□□□ 1.09
PCSK6-217ENST00000618548 ABCB5Q2M3G0 1257 aa21.86■■□□□ 1.09
PCSK6-217ENST00000618548 KLF6Q99612 283 aaPredicted RBP21.86■■□□□ 1.09
PCSK6-217ENST00000618548 TTYH3Q9C0H2 523 aa21.86■■□□□ 1.09
PCSK6-217ENST00000618548 EVX2Q03828 476 aa21.86■■□□□ 1.09
PCSK6-217ENST00000618548 LRRC55Q6ZSA7 311 aa21.86■■□□□ 1.09
PCSK6-217ENST00000618548 PIP4K2CQ8TBX8 421 aa21.86■■□□□ 1.09
PCSK6-217ENST00000618548 TNFRSF25Q93038 417 aa21.86■■□□□ 1.09
PCSK6-217ENST00000618548 PGM2Q96G03 612 aa21.86■■□□□ 1.09
PCSK6-217ENST00000618548 A1CFQ9NQ94 594 aaKnown RBP21.86■■□□□ 1.09
PCSK6-217ENST00000618548 PAPOLBQ9NRJ5 636 aaKnown RBP21.86■■□□□ 1.09
PCSK6-217ENST00000618548 IL17RBQ9NRM6 502 aa21.86■■□□□ 1.09
PCSK6-217ENST00000618548 DDX3XO00571 662 aaKnown RBP eCLIP21.85■■□□□ 1.093e-16■■■■□ 21
PCSK6-217ENST00000618548 SORBS3O60504 671 aa21.85■■□□□ 1.09
PCSK6-217ENST00000618548 TOM1L1O75674 476 aa21.85■■□□□ 1.09
PCSK6-217ENST00000618548 KRT19P08727 400 aa21.85■■□□□ 1.09
PCSK6-217ENST00000618548 MAP3K21Q5TCX8 1036 aa21.85■■□□□ 1.09
PCSK6-217ENST00000618548 SCYL2Q6P3W7 929 aa21.85■■□□□ 1.09
PCSK6-217ENST00000618548 ZSWIM1Q9BR11 485 aa21.85■■□□□ 1.09
PCSK6-217ENST00000618548 MTMR4Q9NYA4 1195 aa21.85■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms