RNA–Protein interactions for RNA: ENST00000615606.4

CLTCL1-208, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,994 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-208ENST00000615606 GUCY2FP51841 1108 aa10.1□□□□□ -0.79
CLTCL1-208ENST00000615606 DYNLT1P63172 113 aa10.1□□□□□ -0.79
CLTCL1-208ENST00000615606 SGSM1Q2NKQ1 1148 aa10.1□□□□□ -0.79
CLTCL1-208ENST00000615606 WDR72Q3MJ13 1102 aa10.1□□□□□ -0.79
CLTCL1-208ENST00000615606 DCAF4L1Q3SXM0 396 aa10.1□□□□□ -0.79
CLTCL1-208ENST00000615606 PASD1Q8IV76 773 aa10.1□□□□□ -0.79
CLTCL1-208ENST00000615606 ELOA2Q8IYF1 753 aaPredicted RBP10.1□□□□□ -0.79
CLTCL1-208ENST00000615606 RBM41Q96IZ5 413 aaKnown RBP10.1□□□□□ -0.79
CLTCL1-208ENST00000615606 SYT17Q9BSW7 474 aa10.1□□□□□ -0.79
CLTCL1-208ENST00000615606 MKNK1Q9BUB5 465 aa10.1□□□□□ -0.79
CLTCL1-208ENST00000615606 VTA1Q9NP79 307 aa10.1□□□□□ -0.79
CLTCL1-208ENST00000615606 DIS3Q9Y2L1 958 aaKnown RBP10.1□□□□□ -0.79
CLTCL1-208ENST00000615606 SLIT2O94813 1529 aa10.1□□□□□ -0.79
CLTCL1-208ENST00000615606 HOXC6P09630 235 aa10.1□□□□□ -0.79
CLTCL1-208ENST00000615606 MYBP10242 640 aa10.1□□□□□ -0.79
CLTCL1-208ENST00000615606 TFDP2Q14188 446 aa10.1□□□□□ -0.79
CLTCL1-208ENST00000615606 PLCB4Q15147 1175 aa10.1□□□□□ -0.79
CLTCL1-208ENST00000615606 APPL2Q8NEU8 664 aa10.1□□□□□ -0.79
CLTCL1-208ENST00000615606 MKL1Q969V6 931 aa10.1□□□□□ -0.79
CLTCL1-208ENST00000615606 ZBTB9Q96C00 473 aa10.1□□□□□ -0.79
CLTCL1-208ENST00000615606 EFCC1Q9HA90 598 aa10.1□□□□□ -0.79
CLTCL1-208ENST00000615606 LTN1O94822 1766 aa10.1□□□□□ -0.79
CLTCL1-208ENST00000615606 ADORA2BP29275 332 aa10.09□□□□□ -0.79
CLTCL1-208ENST00000615606 NLRP11P59045 1033 aaKnown RBP10.09□□□□□ -0.79
CLTCL1-208ENST00000615606 PSMC1P62191 440 aaKnown RBP10.09□□□□□ -0.79
CLTCL1-208ENST00000615606 ERCC6LQ2NKX8 1250 aa10.09□□□□□ -0.79
CLTCL1-208ENST00000615606 SH3BP5O60239 455 aa10.09□□□□□ -0.79
CLTCL1-208ENST00000615606 SOX5P35711 763 aa10.09□□□□□ -0.79
CLTCL1-208ENST00000615606 BFSP2Q13515 415 aa10.09□□□□□ -0.79
CLTCL1-208ENST00000615606 USP49Q70CQ1 688 aa10.09□□□□□ -0.79
CLTCL1-208ENST00000615606 TAB3Q8N5C8 712 aaPredicted RBP10.09□□□□□ -0.79
CLTCL1-208ENST00000615606 HPS3Q969F9 1004 aa10.09□□□□□ -0.79
CLTCL1-208ENST00000615606 ZWILCHQ9H900 591 aa10.09□□□□□ -0.79
CLTCL1-208ENST00000615606 LIMA1Q9UHB6 759 aaKnown RBP10.09□□□□□ -0.79
CLTCL1-208ENST00000615606 PPME1Q9Y570 386 aa10.09□□□□□ -0.79
CLTCL1-208ENST00000615606 WTIPA6NIX2 430 aaPredicted RBP10.09□□□□□ -0.79
CLTCL1-208ENST00000615606 EXTL3O43909 919 aa10.09□□□□□ -0.79
CLTCL1-208ENST00000615606 STAG3L1P0CL83 205 aa10.09□□□□□ -0.79
CLTCL1-208ENST00000615606 YWHAGP61981 247 aaKnown RBP eCLIP10.09□□□□□ -0.79
CLTCL1-208ENST00000615606 ERVK-9P63128 1117 aa10.09□□□□□ -0.79
CLTCL1-208ENST00000615606 ERVK-24P63145 666 aa10.09□□□□□ -0.79
CLTCL1-208ENST00000615606 COG7P83436 770 aa10.09□□□□□ -0.79
CLTCL1-208ENST00000615606 STK4Q13043 487 aa10.09□□□□□ -0.79
CLTCL1-208ENST00000615606 PGM5Q15124 567 aa10.09□□□□□ -0.79
CLTCL1-208ENST00000615606 NTRK3Q16288 839 aa10.09□□□□□ -0.79
CLTCL1-208ENST00000615606 GRIK5Q16478 980 aa10.09□□□□□ -0.79
CLTCL1-208ENST00000615606 LMBRD2Q68DH5 695 aaPredicted RBP10.09□□□□□ -0.79
CLTCL1-208ENST00000615606 RWDD4Q6NW29 188 aaKnown RBP10.09□□□□□ -0.79
CLTCL1-208ENST00000615606 CCDC121Q6ZUS5 278 aa10.09□□□□□ -0.79
CLTCL1-208ENST00000615606 TTC1Q99614 292 aa10.09□□□□□ -0.79
CLTCL1-208ENST00000615606 AGO4Q9HCK5 861 aaKnown RBP10.09□□□□□ -0.79
CLTCL1-208ENST00000615606 RRAGDQ9NQL2 400 aaPredicted RBP10.09□□□□□ -0.79
CLTCL1-208ENST00000615606 PTPN22Q9Y2R2 807 aa10.09□□□□□ -0.79
CLTCL1-208ENST00000615606 SHPRHQ149N8 1683 aa10.09□□□□□ -0.79
CLTCL1-208ENST00000615606 GPR182O15218 404 aa10.09□□□□□ -0.79
CLTCL1-208ENST00000615606 ZBED1O96006 694 aa10.09□□□□□ -0.79
CLTCL1-208ENST00000615606 GUCY2DQ02846 1103 aa10.09□□□□□ -0.79
CLTCL1-208ENST00000615606 NCOA4Q13772 614 aa10.09□□□□□ -0.79
CLTCL1-208ENST00000615606 C4orf50Q6ZRC1 276 aa10.09□□□□□ -0.79
CLTCL1-208ENST00000615606 NIPA1Q7RTP0 329 aa10.09□□□□□ -0.79
CLTCL1-208ENST00000615606 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.09□□□□□ -0.79
CLTCL1-208ENST00000615606 ABHD16BQ9H3Z7 469 aa10.09□□□□□ -0.79
CLTCL1-208ENST00000615606 OGFRQ9NZT2 677 aa10.09□□□□□ -0.79
CLTCL1-208ENST00000615606 TUBE1Q9UJT0 475 aa10.09□□□□□ -0.79
CLTCL1-208ENST00000615606 SNX9Q9Y5X1 595 aa10.09□□□□□ -0.79
CLTCL1-208ENST00000615606 ATRNO75882 1429 aa10.08□□□□□ -0.8
CLTCL1-208ENST00000615606 EBAG9O00559 213 aa10.08□□□□□ -0.8
CLTCL1-208ENST00000615606 CLTAP09496 248 aa10.08□□□□□ -0.8
CLTCL1-208ENST00000615606 THPOP40225 353 aa10.08□□□□□ -0.8
CLTCL1-208ENST00000615606 PPP2R5CQ13362 524 aa10.08□□□□□ -0.8
CLTCL1-208ENST00000615606 SV2CQ496J9 727 aa10.08□□□□□ -0.8
CLTCL1-208ENST00000615606 MUM1L1Q5H9M0 696 aa10.08□□□□□ -0.8
CLTCL1-208ENST00000615606 LRP10Q7Z4F1 713 aa10.08□□□□□ -0.8
CLTCL1-208ENST00000615606 SPATA2LQ8IUW3 424 aaPredicted RBP10.08□□□□□ -0.8
CLTCL1-208ENST00000615606 GPATCH11Q8N954 259 aa10.08□□□□□ -0.8
CLTCL1-208ENST00000615606 DNAAF3Q8N9W5 541 aa10.08□□□□□ -0.8
CLTCL1-208ENST00000615606 AFG1LQ8WV93 481 aa10.08□□□□□ -0.8
CLTCL1-208ENST00000615606 WDR18Q9BV38 432 aa10.08□□□□□ -0.8
CLTCL1-208ENST00000615606 LMO7Q8WWI1 1683 aa10.08□□□□□ -0.8
CLTCL1-208ENST00000615606 TJP3O95049 919 aa10.08□□□□□ -0.8
CLTCL1-208ENST00000615606 RALAP11233 206 aa10.08□□□□□ -0.8
CLTCL1-208ENST00000615606 TAP1Q03518 808 aa10.08□□□□□ -0.8
CLTCL1-208ENST00000615606 C1orf228Q6PIY5 440 aa10.08□□□□□ -0.8
CLTCL1-208ENST00000615606 NDUFAF2Q8N183 169 aa10.08□□□□□ -0.8
CLTCL1-208ENST00000615606 TTC13Q8NBP0 860 aa10.08□□□□□ -0.8
CLTCL1-208ENST00000615606 TRPM4Q8TD43 1214 aa10.08□□□□□ -0.8
CLTCL1-208ENST00000615606 HSPH1Q92598 858 aa10.08□□□□□ -0.8
CLTCL1-208ENST00000615606 GLTPD2A6NH11 291 aa10.08□□□□□ -0.8
CLTCL1-208ENST00000615606 NAMPTP43490 491 aa10.08□□□□□ -0.8
CLTCL1-208ENST00000615606 FMO5P49326 533 aa10.08□□□□□ -0.8
CLTCL1-208ENST00000615606 SNX1Q13596 522 aa10.08□□□□□ -0.8
CLTCL1-208ENST00000615606 RNF219Q5W0B1 726 aaPredicted RBP10.08□□□□□ -0.8
CLTCL1-208ENST00000615606 IP6K2Q9UHH9 426 aa10.08□□□□□ -0.8
CLTCL1-208ENST00000615606 ZNF142P52746 1687 aaPredicted RBP10.08□□□□□ -0.8
CLTCL1-208ENST00000615606 HEXIM1O94992 359 aaKnown RBP10.08□□□□□ -0.8
CLTCL1-208ENST00000615606 AKR1A1P14550 325 aa10.08□□□□□ -0.8
CLTCL1-208ENST00000615606 ADORA2AP29274 412 aa10.08□□□□□ -0.8
CLTCL1-208ENST00000615606 ALDH5A1P51649 535 aaPredicted RBP10.08□□□□□ -0.8
CLTCL1-208ENST00000615606 PKN1Q16512 942 aa10.08□□□□□ -0.8
CLTCL1-208ENST00000615606 ZC2HC1CQ53FD0 456 aaPredicted RBP10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms