RNA–Protein interactions for RNA: ENST00000615468.4

TNFAIP3-208, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 3,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-208ENST00000615468 PARP10Q53GL7 1025 aa11.09□□□□□ -0.63
TNFAIP3-208ENST00000615468 EAPPQ56P03 285 aaPredicted RBP11.09□□□□□ -0.63
TNFAIP3-208ENST00000615468 VSTM1Q6UX27 236 aa11.09□□□□□ -0.63
TNFAIP3-208ENST00000615468 IZUMO2Q6UXV1 221 aa11.09□□□□□ -0.63
TNFAIP3-208ENST00000615468 PPP1R21Q6ZMI0 780 aa11.09□□□□□ -0.63
TNFAIP3-208ENST00000615468 INPP5DQ92835 1189 aa11.09□□□□□ -0.63
TNFAIP3-208ENST00000615468 MAGEB18Q96M61 343 aa11.09□□□□□ -0.63
TNFAIP3-208ENST00000615468 CCDC77Q9BR77 488 aa11.09□□□□□ -0.63
TNFAIP3-208ENST00000615468 UBA5Q9GZZ9 404 aa11.09□□□□□ -0.63
TNFAIP3-208ENST00000615468 MIS12Q9H081 205 aa11.09□□□□□ -0.63
TNFAIP3-208ENST00000615468 CDC42EP4Q9H3Q1 356 aaKnown RBP11.09□□□□□ -0.63
TNFAIP3-208ENST00000615468 PCDHA4Q9UN74 947 aa11.09□□□□□ -0.63
TNFAIP3-208ENST00000615468 RARGP13631 454 aa11.09□□□□□ -0.63
TNFAIP3-208ENST00000615468 KRT15P19012 456 aa11.09□□□□□ -0.63
TNFAIP3-208ENST00000615468 PTPN4P29074 926 aa11.09□□□□□ -0.63
TNFAIP3-208ENST00000615468 GALCP54803 685 aa11.09□□□□□ -0.63
TNFAIP3-208ENST00000615468 DHX34Q14147 1143 aaKnown RBP11.09□□□□□ -0.63
TNFAIP3-208ENST00000615468 ARMCX6Q7L4S7 300 aa11.09□□□□□ -0.63
TNFAIP3-208ENST00000615468 MTDHQ86UE4 582 aaKnown RBP11.09□□□□□ -0.63
TNFAIP3-208ENST00000615468 ENDOVQ8N8Q3 282 aaKnown RBP11.09□□□□□ -0.63
TNFAIP3-208ENST00000615468 SMC1BQ8NDV3 1235 aa11.09□□□□□ -0.63
TNFAIP3-208ENST00000615468 ARHGEF1Q92888 912 aaKnown RBP11.09□□□□□ -0.63
TNFAIP3-208ENST00000615468 FAM136AQ96C01 138 aa11.09□□□□□ -0.63
TNFAIP3-208ENST00000615468 DDX18Q9NVP1 670 aaKnown RBP11.09□□□□□ -0.63
TNFAIP3-208ENST00000615468 A0A0G2JND7 137 aa11.08□□□□□ -0.64
TNFAIP3-208ENST00000615468 TSPY2A6NKD2 308 aa11.08□□□□□ -0.64
TNFAIP3-208ENST00000615468 TPD52L2O43399 206 aaKnown RBP11.08□□□□□ -0.64
TNFAIP3-208ENST00000615468 TBX10O75333 385 aa11.08□□□□□ -0.64
TNFAIP3-208ENST00000615468 NEK3P51956 506 aa11.08□□□□□ -0.64
TNFAIP3-208ENST00000615468 FUT2Q10981 343 aa11.08□□□□□ -0.64
TNFAIP3-208ENST00000615468 KCNH2Q12809 1159 aa11.08□□□□□ -0.64
TNFAIP3-208ENST00000615468 TROAPQ12815 778 aa11.08□□□□□ -0.64
TNFAIP3-208ENST00000615468 SEC23AQ15436 765 aa11.08□□□□□ -0.64
TNFAIP3-208ENST00000615468 TMEM266Q2M3C6 531 aa11.08□□□□□ -0.64
TNFAIP3-208ENST00000615468 CAVIN4Q5BKX8 364 aa11.08□□□□□ -0.64
TNFAIP3-208ENST00000615468 SPDYCQ5MJ68 293 aa11.08□□□□□ -0.64
TNFAIP3-208ENST00000615468 RBM26Q5T8P6 1007 aaKnown RBP11.08□□□□□ -0.64
TNFAIP3-208ENST00000615468 ZDHHC24Q6UX98 284 aa11.08□□□□□ -0.64
TNFAIP3-208ENST00000615468 C4orf50Q6ZRC1 276 aa11.08□□□□□ -0.64
TNFAIP3-208ENST00000615468 CAPN12Q6ZSI9 719 aa11.08□□□□□ -0.64
TNFAIP3-208ENST00000615468 ANKRD23Q86SG2 305 aa11.08□□□□□ -0.64
TNFAIP3-208ENST00000615468 NME8Q8N427 588 aa11.08□□□□□ -0.64
TNFAIP3-208ENST00000615468 C4orf32Q8N8J7 132 aa11.08□□□□□ -0.64
TNFAIP3-208ENST00000615468 LARP4BQ92615 738 aaKnown RBP11.08□□□□□ -0.64
TNFAIP3-208ENST00000615468 TUBGCP5Q96RT8 1024 aa11.08□□□□□ -0.64
TNFAIP3-208ENST00000615468 NPHS2Q9NP85 383 aa11.08□□□□□ -0.64
TNFAIP3-208ENST00000615468 USP20Q9Y2K6 914 aa11.08□□□□□ -0.64
TNFAIP3-208ENST00000615468 NTSR2O95665 410 aa11.08□□□□□ -0.64
TNFAIP3-208ENST00000615468 RCAN1P53805 252 aa11.08□□□□□ -0.64
TNFAIP3-208ENST00000615468 PFKFB3Q16875 520 aaPredicted RBP11.08□□□□□ -0.64
TNFAIP3-208ENST00000615468 TRAPPC3LQ5T215 181 aa11.08□□□□□ -0.64
TNFAIP3-208ENST00000615468 SEL1L2Q5TEA6 688 aa11.08□□□□□ -0.64
TNFAIP3-208ENST00000615468 C6orf163Q5TEZ5 329 aa11.08□□□□□ -0.64
TNFAIP3-208ENST00000615468 FYB2Q5VWT5 728 aa11.08□□□□□ -0.64
TNFAIP3-208ENST00000615468 CYP4F22Q6NT55 531 aa11.08□□□□□ -0.64
TNFAIP3-208ENST00000615468 UNC13DQ70J99 1090 aa11.08□□□□□ -0.64
TNFAIP3-208ENST00000615468 SLC35G2Q8TBE7 412 aa11.08□□□□□ -0.64
TNFAIP3-208ENST00000615468 OLFM3Q96PB7 478 aa11.08□□□□□ -0.64
TNFAIP3-208ENST00000615468 MAGEF1Q9HAY2 307 aa11.08□□□□□ -0.64
TNFAIP3-208ENST00000615468 SLC4A7Q9Y6M7 1214 aa11.08□□□□□ -0.64
TNFAIP3-208ENST00000615468 COMMD3-BMI1R4GMX3 469 aa11.08□□□□□ -0.64
TNFAIP3-208ENST00000615468 TNS2Q63HR2 1409 aa11.08□□□□□ -0.64
TNFAIP3-208ENST00000615468 CNTNAP5Q8WYK1 1306 aa11.08□□□□□ -0.64
TNFAIP3-208ENST00000615468 TAC1P20366 129 aa11.08□□□□□ -0.64
TNFAIP3-208ENST00000615468 CETN2P41208 172 aa11.08□□□□□ -0.64
TNFAIP3-208ENST00000615468 CBX3Q13185 183 aa11.08□□□□□ -0.64
TNFAIP3-208ENST00000615468 ISLR2Q6UXK2 745 aa11.08□□□□□ -0.64
TNFAIP3-208ENST00000615468 ANKRD35Q8N283 1001 aa11.08□□□□□ -0.64
TNFAIP3-208ENST00000615468 FAM161BQ96MY7 647 aa11.08□□□□□ -0.64
TNFAIP3-208ENST00000615468 TXLNGYQ9BZA5 131 aa11.08□□□□□ -0.64
TNFAIP3-208ENST00000615468 ROPN1BQ9BZX4 212 aaPredicted RBP11.08□□□□□ -0.64
TNFAIP3-208ENST00000615468 ROPN1Q9HAT0 212 aaPredicted RBP11.08□□□□□ -0.64
TNFAIP3-208ENST00000615468 VAT1LQ9HCJ6 419 aa11.08□□□□□ -0.64
TNFAIP3-208ENST00000615468 PRKAG3Q9UGI9 489 aa11.08□□□□□ -0.64
TNFAIP3-208ENST00000615468 RBM47A0AV96 593 aaKnown RBP11.07□□□□□ -0.64
TNFAIP3-208ENST00000615468 PODXLO00592 558 aa11.07□□□□□ -0.64
TNFAIP3-208ENST00000615468 PSMG1O95456 288 aa11.07□□□□□ -0.64
TNFAIP3-208ENST00000615468 FOXN2P32314 431 aa11.07□□□□□ -0.64
TNFAIP3-208ENST00000615468 TPTE2Q6XPS3 522 aa11.07□□□□□ -0.64
TNFAIP3-208ENST00000615468 LRRC55Q6ZSA7 311 aa11.07□□□□□ -0.64
TNFAIP3-208ENST00000615468 CCDC125Q86Z20 511 aa11.07□□□□□ -0.64
TNFAIP3-208ENST00000615468 GLYCTKQ8IVS8 523 aa11.07□□□□□ -0.64
TNFAIP3-208ENST00000615468 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.07□□□□□ -0.648e-12■■■■□ 20.4
TNFAIP3-208ENST00000615468 SH3RF3Q8TEJ3 882 aaPredicted RBP11.07□□□□□ -0.64
TNFAIP3-208ENST00000615468 WDR60Q8WVS4 1066 aa11.07□□□□□ -0.64
TNFAIP3-208ENST00000615468 DDX12PQ92771 950 aa11.07□□□□□ -0.64
TNFAIP3-208ENST00000615468 ASCC2Q9H1I8 757 aaPredicted RBP11.07□□□□□ -0.64
TNFAIP3-208ENST00000615468 AIPL1Q9NZN9 384 aa11.07□□□□□ -0.64
TNFAIP3-208ENST00000615468 MTUS1Q9ULD2 1270 aa11.07□□□□□ -0.64
TNFAIP3-208ENST00000615468 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.07□□□□□ -0.64
TNFAIP3-208ENST00000615468 SPATA31D3P0C874 917 aa11.07□□□□□ -0.64
TNFAIP3-208ENST00000615468 INHBCP55103 352 aa11.07□□□□□ -0.64
TNFAIP3-208ENST00000615468 SH3BGRP55822 239 aaPredicted RBP11.07□□□□□ -0.64
TNFAIP3-208ENST00000615468 OCRLQ01968 901 aa11.07□□□□□ -0.64
TNFAIP3-208ENST00000615468 PPP2R5CQ13362 524 aa11.07□□□□□ -0.64
TNFAIP3-208ENST00000615468 VPS72Q15906 364 aa11.07□□□□□ -0.64
TNFAIP3-208ENST00000615468 SLC44A4Q53GD3 710 aa11.07□□□□□ -0.64
TNFAIP3-208ENST00000615468 ACSBG2Q5FVE4 666 aa11.07□□□□□ -0.64
TNFAIP3-208ENST00000615468 HERC4Q5GLZ8 1057 aaPredicted RBP11.07□□□□□ -0.64
TNFAIP3-208ENST00000615468 CCDC62Q6P9F0 684 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms