RNA–Protein interactions for RNA: ENST00000615065.1

PRKN-211, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene PRKN, Length 261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-211ENST00000615065 POLR3CQ9BUI4 534 aaPredicted RBP16.45■□□□□ 0.22
PRKN-211ENST00000615065 APOL6Q9BWW8 343 aa16.45■□□□□ 0.22
PRKN-211ENST00000615065 NFKBIZQ9BYH8 718 aa16.45■□□□□ 0.22
PRKN-211ENST00000615065 SH2B1Q9NRF2 756 aaPredicted RBP16.45■□□□□ 0.22
PRKN-211ENST00000615065 ARL5CA6NH57 179 aa16.44■□□□□ 0.22
PRKN-211ENST00000615065 LRRIQ4A6NIV6 560 aa16.44■□□□□ 0.22
PRKN-211ENST00000615065 NRP1O14786 923 aa16.44■□□□□ 0.22
PRKN-211ENST00000615065 INPPL1O15357 1258 aa16.44■□□□□ 0.22
PRKN-211ENST00000615065 SSBP05455 408 aaKnown RBP eCLIP16.44■□□□□ 0.22
PRKN-211ENST00000615065 RBM25P49756 843 aaKnown RBP16.44■□□□□ 0.22
PRKN-211ENST00000615065 NCBP1Q09161 790 aaKnown RBP16.44■□□□□ 0.22
PRKN-211ENST00000615065 ORC2Q13416 577 aaPredicted RBP16.44■□□□□ 0.22
PRKN-211ENST00000615065 NBR1Q14596 966 aa16.44■□□□□ 0.22
PRKN-211ENST00000615065 TTC38Q5R3I4 469 aa16.44■□□□□ 0.22
PRKN-211ENST00000615065 RARS2Q5T160 578 aaKnown RBP16.44■□□□□ 0.22
PRKN-211ENST00000615065 NOSTRINQ8IVI9 506 aa16.44■□□□□ 0.22
PRKN-211ENST00000615065 C12orf76Q8N812 135 aaPredicted RBP16.44■□□□□ 0.22
PRKN-211ENST00000615065 FAM184AQ8NB25 1140 aa16.44■□□□□ 0.22
PRKN-211ENST00000615065 TMEM87AQ8NBN3 555 aa16.44■□□□□ 0.22
PRKN-211ENST00000615065 ZFP42Q96MM3 310 aa16.44■□□□□ 0.22
PRKN-211ENST00000615065 ADAM7Q9H2U9 754 aa16.44■□□□□ 0.22
PRKN-211ENST00000615065 NXF3Q9H4D5 531 aaKnown RBP16.44■□□□□ 0.22
PRKN-211ENST00000615065 POMKQ9H5K3 350 aa16.44■□□□□ 0.22
PRKN-211ENST00000615065 UBN1Q9NPG3 1134 aa16.44■□□□□ 0.22
PRKN-211ENST00000615065 MARCH5Q9NX47 278 aa16.44■□□□□ 0.22
PRKN-211ENST00000615065 DBR1Q9UK59 544 aaKnown RBP16.44■□□□□ 0.22
PRKN-211ENST00000615065 FAN1Q9Y2M0 1017 aa16.44■□□□□ 0.22
PRKN-211ENST00000615065 PRG3Q9Y2Y8 225 aaPredicted RBP16.44■□□□□ 0.22
PRKN-211ENST00000615065 ZNF318Q5VUA4 2279 aa16.44■□□□□ 0.22
PRKN-211ENST00000615065 PLXNA3P51805 1871 aa16.44■□□□□ 0.22
PRKN-211ENST00000615065 DENND4AQ7Z401 1863 aa16.44■□□□□ 0.22
PRKN-211ENST00000615065 NPTXRO95502 500 aa16.43■□□□□ 0.22
PRKN-211ENST00000615065 ALDH2P05091 517 aa16.43■□□□□ 0.22
PRKN-211ENST00000615065 WEE2P0C1S8 567 aa16.43■□□□□ 0.22
PRKN-211ENST00000615065 RPA1P27694 616 aa16.43■□□□□ 0.22
PRKN-211ENST00000615065 SCNN1GP51170 649 aa16.43■□□□□ 0.22
PRKN-211ENST00000615065 ZXDAP98168 799 aa16.43■□□□□ 0.22
PRKN-211ENST00000615065 ITIH3Q06033 890 aa16.43■□□□□ 0.22
PRKN-211ENST00000615065 GNL2Q13823 731 aaKnown RBP16.43■□□□□ 0.22
PRKN-211ENST00000615065 GIT2Q14161 759 aa16.43■□□□□ 0.22
PRKN-211ENST00000615065 CES5AQ6NT32 575 aa16.43■□□□□ 0.22
PRKN-211ENST00000615065 KANK3Q6NY19 840 aa16.43■□□□□ 0.22
PRKN-211ENST00000615065 COLGALT2Q8IYK4 626 aa16.43■□□□□ 0.22
PRKN-211ENST00000615065 MCPH1Q8NEM0 835 aa16.43■□□□□ 0.22
PRKN-211ENST00000615065 ERMNQ8TAM6 284 aa16.43■□□□□ 0.22
PRKN-211ENST00000615065 SLC22A17Q8WUG5 538 aa16.43■□□□□ 0.22
PRKN-211ENST00000615065 NACC1Q96RE7 527 aa16.43■□□□□ 0.22
PRKN-211ENST00000615065 TRIM6Q9C030 488 aaPredicted RBP16.43■□□□□ 0.22
PRKN-211ENST00000615065 TSHZ2Q9NRE2 1034 aa16.43■□□□□ 0.22
PRKN-211ENST00000615065 DZANK1Q9NVP4 752 aa16.43■□□□□ 0.22
PRKN-211ENST00000615065 MIOSQ9NXC5 875 aa16.43■□□□□ 0.22
PRKN-211ENST00000615065 C2orf16Q68DN1 1984 aa16.43■□□□□ 0.22
PRKN-211ENST00000615065 F8W810 466 aa16.42■□□□□ 0.22
PRKN-211ENST00000615065 AKAP5P24588 427 aa16.42■□□□□ 0.22
PRKN-211ENST00000615065 OR1G1P47890 313 aa16.42■□□□□ 0.22
PRKN-211ENST00000615065 DSC1Q08554 894 aa16.42■□□□□ 0.22
PRKN-211ENST00000615065 CDCA2Q69YH5 1023 aaPredicted RBP16.42■□□□□ 0.22
PRKN-211ENST00000615065 TRIM67Q6ZTA4 783 aa16.42■□□□□ 0.22
PRKN-211ENST00000615065 FEZF2Q8TBJ5 459 aa16.42■□□□□ 0.22
PRKN-211ENST00000615065 BSNDQ8WZ55 320 aa16.42■□□□□ 0.22
PRKN-211ENST00000615065 GIT1Q9Y2X7 761 aa16.42■□□□□ 0.22
PRKN-211ENST00000615065 MUC6Q6W4X9 2439 aa16.42■□□□□ 0.22
PRKN-211ENST00000615065 ARHGEF35A5YM69 484 aa16.41■□□□□ 0.22
PRKN-211ENST00000615065 TMEM221A6NGB7 291 aa16.41■□□□□ 0.22
PRKN-211ENST00000615065 M0R296 226 aa16.41■□□□□ 0.22
PRKN-211ENST00000615065 LILRB3O75022 631 aa16.41■□□□□ 0.22
PRKN-211ENST00000615065 CNPP09543 421 aaKnown RBP16.41■□□□□ 0.22
PRKN-211ENST00000615065 TRAPPC10P48553 1259 aa16.41■□□□□ 0.22
PRKN-211ENST00000615065 ECM1Q16610 540 aa16.41■□□□□ 0.22
PRKN-211ENST00000615065 SLC27A1Q6PCB7 646 aa16.41■□□□□ 0.22
PRKN-211ENST00000615065 PADI6Q6TGC4 694 aa16.41■□□□□ 0.22
PRKN-211ENST00000615065 TAS1R1Q7RTX1 841 aa16.41■□□□□ 0.22
PRKN-211ENST00000615065 C4orf32Q8N8J7 132 aa16.41■□□□□ 0.22
PRKN-211ENST00000615065 NECTIN4Q96NY8 510 aa16.41■□□□□ 0.22
PRKN-211ENST00000615065 KLHL5Q96PQ7 755 aa16.41■□□□□ 0.22
PRKN-211ENST00000615065 HERC2P3Q9BVR0 1158 aa16.41■□□□□ 0.22
PRKN-211ENST00000615065 STK39Q9UEW8 545 aa16.41■□□□□ 0.22
PRKN-211ENST00000615065 NOL7Q9UMY1 257 aaKnown RBP16.41■□□□□ 0.22
PRKN-211ENST00000615065 NR2E1Q9Y466 385 aa16.41■□□□□ 0.22
PRKN-211ENST00000615065 MYO10Q9HD67 2058 aa16.41■□□□□ 0.22
PRKN-211ENST00000615065 KMT2EQ8IZD2 1858 aa16.4■□□□□ 0.22
PRKN-211ENST00000615065 A0A1B0GUA9 196 aa16.4■□□□□ 0.22
PRKN-211ENST00000615065 TTLL13PA6NNM8 815 aa16.4■□□□□ 0.22
PRKN-211ENST00000615065 C2CD4DB7Z1M9 353 aa16.4■□□□□ 0.22
PRKN-211ENST00000615065 C2CD2LO14523 706 aa16.4■□□□□ 0.22
PRKN-211ENST00000615065 SOD2P04179 222 aa16.4■□□□□ 0.22
PRKN-211ENST00000615065 U2AF2P26368 475 aaKnown RBP eCLIP16.4■□□□□ 0.22
PRKN-211ENST00000615065 KLRC2P26717 231 aa16.4■□□□□ 0.22
PRKN-211ENST00000615065 CCT6AP40227 531 aaKnown RBP16.4■□□□□ 0.22
PRKN-211ENST00000615065 MTHFRP42898 656 aa16.4■□□□□ 0.22
PRKN-211ENST00000615065 TOB1P50616 345 aaPredicted RBP16.4■□□□□ 0.22
PRKN-211ENST00000615065 FXR2P51116 673 aaKnown RBP eCLIP16.4■□□□□ 0.22
PRKN-211ENST00000615065 CLCN4P51793 760 aa16.4■□□□□ 0.22
PRKN-211ENST00000615065 PTPN21Q16825 1174 aa16.4■□□□□ 0.22
PRKN-211ENST00000615065 KIAA1841Q6NSI8 718 aa16.4■□□□□ 0.22
PRKN-211ENST00000615065 PPP4R3CPQ6ZMV5 832 aa16.4■□□□□ 0.22
PRKN-211ENST00000615065 CABP7Q86V35 215 aa16.4■□□□□ 0.22
PRKN-211ENST00000615065 PPFIBP1Q86W92 1011 aa16.4■□□□□ 0.22
PRKN-211ENST00000615065 ZBTB8OSQ8IWT0 167 aa16.4■□□□□ 0.22
PRKN-211ENST00000615065 HACE1Q8IYU2 909 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms