RNA–Protein interactions for RNA: ENST00000595858.5

DDX49-204, Transcript of DEAD-box helicase 49, humanhuman

TSL 1 (best)

Gene DDX49, Length 1,882 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49-204ENST00000595858 C1orf112Q9NSG2 853 aa16.42■□□□□ 0.22
DDX49-204ENST00000595858 EIF3DO15371 548 aaKnown RBP eCLIP16.41■□□□□ 0.22
DDX49-204ENST00000595858 FAM189BP81408 668 aa16.41■□□□□ 0.22
DDX49-204ENST00000595858 UBXN11Q5T124 520 aa16.41■□□□□ 0.22
DDX49-204ENST00000595858 ZPBP2Q6X784 338 aa16.41■□□□□ 0.22
DDX49-204ENST00000595858 KIAA0895Q8NCT3 520 aa16.41■□□□□ 0.22
DDX49-204ENST00000595858 ZNF507Q8TCN5 953 aa16.41■□□□□ 0.22
DDX49-204ENST00000595858 RNPC3Q96LT9 517 aaKnown RBP16.41■□□□□ 0.22
DDX49-204ENST00000595858 ACCSQ96QU6 501 aa16.41■□□□□ 0.22
DDX49-204ENST00000595858 PDZD7Q9H5P4 517 aa16.41■□□□□ 0.22
DDX49-204ENST00000595858 RMND1Q9NWS8 449 aa16.41■□□□□ 0.22
DDX49-204ENST00000595858 KIAA1468Q9P260 1216 aa16.41■□□□□ 0.22
DDX49-204ENST00000595858 TNFSF13BQ9Y275 285 aa16.41■□□□□ 0.22
DDX49-204ENST00000595858 A0A0U1RQF3 1178 aa16.4■□□□□ 0.22
DDX49-204ENST00000595858 N4BP3O15049 544 aa16.4■□□□□ 0.22
DDX49-204ENST00000595858 PIGRP01833 764 aa16.4■□□□□ 0.22
DDX49-204ENST00000595858 KCNJ6P48051 423 aa16.4■□□□□ 0.22
DDX49-204ENST00000595858 DEFB103AP81534 67 aa16.4■□□□□ 0.22
DDX49-204ENST00000595858 PRPF38BQ5VTL8 546 aaKnown RBP16.4■□□□□ 0.22
DDX49-204ENST00000595858 EEF1DP3Q658K8 133 aa16.4■□□□□ 0.22
DDX49-204ENST00000595858 SLC27A1Q6PCB7 646 aa16.4■□□□□ 0.22
DDX49-204ENST00000595858 SCFD1Q8WVM8 642 aa16.4■□□□□ 0.22
DDX49-204ENST00000595858 BICD1Q96G01 975 aa16.4■□□□□ 0.22
DDX49-204ENST00000595858 EIF2AQ9BY44 585 aaKnown RBP16.4■□□□□ 0.22
DDX49-204ENST00000595858 PTPRHQ9HD43 1115 aa16.4■□□□□ 0.22
DDX49-204ENST00000595858 FAM105AQ9NUU6 356 aa16.4■□□□□ 0.22
DDX49-204ENST00000595858 SLC4A7Q9Y6M7 1214 aa16.4■□□□□ 0.22
DDX49-204ENST00000595858 MICAL3Q7RTP6 2002 aa16.4■□□□□ 0.22
DDX49-204ENST00000595858 AMHP03971 560 aa16.39■□□□□ 0.22
DDX49-204ENST00000595858 MRE11P49959 708 aa16.39■□□□□ 0.22
DDX49-204ENST00000595858 TDHQ8IZJ6 230 aa16.39■□□□□ 0.22
DDX49-204ENST00000595858 MYOCDQ8IZQ8 938 aa16.39■□□□□ 0.22
DDX49-204ENST00000595858 ZBTB45Q96K62 511 aaPredicted RBP16.39■□□□□ 0.22
DDX49-204ENST00000595858 IKZF4Q9H2S9 585 aa16.39■□□□□ 0.22
DDX49-204ENST00000595858 MAN1B1Q9UKM7 699 aa16.39■□□□□ 0.22
DDX49-204ENST00000595858 EXOC7Q9UPT5 735 aa16.39■□□□□ 0.22
DDX49-204ENST00000595858 GDAQ9Y2T3 454 aa16.39■□□□□ 0.22
DDX49-204ENST00000595858 TTC3P53804 2025 aa16.39■□□□□ 0.21
DDX49-204ENST00000595858 HNRNPDLO14979 420 aaKnown RBP16.39■□□□□ 0.21
DDX49-204ENST00000595858 ZNF623O75123 536 aa16.39■□□□□ 0.21
DDX49-204ENST00000595858 TOM1L1O75674 476 aa16.39■□□□□ 0.21
DDX49-204ENST00000595858 PROZP22891 400 aa16.39■□□□□ 0.21
DDX49-204ENST00000595858 HOXD13P35453 343 aa16.39■□□□□ 0.21
DDX49-204ENST00000595858 LIG4P49917 911 aa16.39■□□□□ 0.21
DDX49-204ENST00000595858 ECHDC2Q86YB7 292 aa16.39■□□□□ 0.21
DDX49-204ENST00000595858 CRIPAKQ8N1N5 446 aa16.39■□□□□ 0.21
DDX49-204ENST00000595858 TOP1MTQ969P6 601 aa16.39■□□□□ 0.21
DDX49-204ENST00000595858 ADPGKQ9BRR6 497 aa16.39■□□□□ 0.21
DDX49-204ENST00000595858 TCHPQ9BT92 498 aa16.39■□□□□ 0.21
DDX49-204ENST00000595858 TMEM206Q9H813 350 aa16.39■□□□□ 0.21
DDX49-204ENST00000595858 PCDHB2Q9Y5E7 798 aa16.39■□□□□ 0.21
DDX49-204ENST00000595858 ANKRD63C9JTQ0 380 aa16.38■□□□□ 0.21
DDX49-204ENST00000595858 ABLIM1O14639 778 aa16.38■□□□□ 0.21
DDX49-204ENST00000595858 NPTXRO95502 500 aa16.38■□□□□ 0.21
DDX49-204ENST00000595858 SKIP12755 728 aa16.38■□□□□ 0.21
DDX49-204ENST00000595858 IBSPP21815 317 aaPredicted RBP16.38■□□□□ 0.21
DDX49-204ENST00000595858 RAB27AP51159 221 aa16.38■□□□□ 0.21
DDX49-204ENST00000595858 BMT2Q1RMZ1 405 aa16.38■□□□□ 0.21
DDX49-204ENST00000595858 ZNF658Q5TYW1 1059 aaPredicted RBP16.38■□□□□ 0.21
DDX49-204ENST00000595858 ISM2Q6H9L7 571 aa16.38■□□□□ 0.21
DDX49-204ENST00000595858 SLC39A4Q6P5W5 647 aa16.38■□□□□ 0.21
DDX49-204ENST00000595858 MPZL3Q6UWV2 235 aa16.38■□□□□ 0.21
DDX49-204ENST00000595858 NELFCDQ8IXH7 590 aa16.38■□□□□ 0.21
DDX49-204ENST00000595858 SYCP3Q8IZU3 236 aa16.38■□□□□ 0.21
DDX49-204ENST00000595858 PHOSPHO2Q8TCD6 241 aa16.38■□□□□ 0.21
DDX49-204ENST00000595858 TRIM6Q9C030 488 aaPredicted RBP16.38■□□□□ 0.21
DDX49-204ENST00000595858 UBE4BO95155 1302 aa16.38■□□□□ 0.21
DDX49-204ENST00000595858 RANBP2P49792 3224 aaKnown RBP16.38■□□□□ 0.21
DDX49-204ENST00000595858 CLDN3O15551 220 aa16.37■□□□□ 0.21
DDX49-204ENST00000595858 UPP2O95045 317 aa16.37■□□□□ 0.21
DDX49-204ENST00000595858 ATP2A2P16615 1042 aaKnown RBP16.37■□□□□ 0.21
DDX49-204ENST00000595858 ZNF568Q3ZCX4 644 aa16.37■□□□□ 0.21
DDX49-204ENST00000595858 TMCO2Q7Z6W1 182 aaPredicted RBP16.37■□□□□ 0.21
DDX49-204ENST00000595858 ZNF598Q86UK7 904 aaKnown RBP16.37■□□□□ 0.21
DDX49-204ENST00000595858 SLC9A7Q96T83 725 aa16.37■□□□□ 0.21
DDX49-204ENST00000595858 GTPBP4Q9BZE4 634 aaKnown RBP16.37■□□□□ 0.21
DDX49-204ENST00000595858 CDT1Q9H211 546 aa16.37■□□□□ 0.21
DDX49-204ENST00000595858 ELAC1Q9H777 363 aaKnown RBP16.37■□□□□ 0.21
DDX49-204ENST00000595858 TMEM161AQ9NX61 479 aa16.37■□□□□ 0.21
DDX49-204ENST00000595858 COLQQ9Y215 455 aaPredicted RBP16.37■□□□□ 0.21
DDX49-204ENST00000595858 PCDHB7Q9Y5E2 793 aa16.37■□□□□ 0.21
DDX49-204ENST00000595858 TISP43B9A030 160 aa16.37■□□□□ 0.21
DDX49-204ENST00000595858 BIN1O00499 593 aa16.37■□□□□ 0.21
DDX49-204ENST00000595858 EOMESO95936 686 aa16.37■□□□□ 0.21
DDX49-204ENST00000595858 STAG3L1P0CL83 205 aa16.37■□□□□ 0.21
DDX49-204ENST00000595858 ATF7P17544 494 aaPredicted RBP16.37■□□□□ 0.21
DDX49-204ENST00000595858 MCL1Q07820 350 aa16.37■□□□□ 0.21
DDX49-204ENST00000595858 MORC3Q14149 939 aa16.37■□□□□ 0.21
DDX49-204ENST00000595858 KNOP1Q1ED39 458 aaKnown RBP16.37■□□□□ 0.21
DDX49-204ENST00000595858 APBB1IPQ7Z5R6 666 aaPredicted RBP16.37■□□□□ 0.21
DDX49-204ENST00000595858 MRPL10Q7Z7H8 261 aaKnown RBP16.37■□□□□ 0.21
DDX49-204ENST00000595858 ZBTB33Q86T24 672 aa16.37■□□□□ 0.21
DDX49-204ENST00000595858 NPAS4Q8IUM7 802 aa16.37■□□□□ 0.21
DDX49-204ENST00000595858 SMYD4Q8IYR2 804 aaPredicted RBP16.37■□□□□ 0.21
DDX49-204ENST00000595858 SMG8Q8ND04 991 aaKnown RBP16.37■□□□□ 0.21
DDX49-204ENST00000595858 HAPLN2Q9GZV7 340 aa16.37■□□□□ 0.21
DDX49-204ENST00000595858 RNF216Q9NWF9 866 aaPredicted RBP16.37■□□□□ 0.21
DDX49-204ENST00000595858 ANKFY1Q9P2R3 1169 aa16.37■□□□□ 0.21
DDX49-204ENST00000595858 LRFN2Q9ULH4 789 aa16.37■□□□□ 0.21
DDX49-204ENST00000595858 MAPK8IP1Q9UQF2 711 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms