RNA–Protein interactions for RNA: ENST00000593891.1

ZNF558-202, Transcript of zinc finger protein 558, humanhuman

TSL 5

Gene ZNF558, Length 292 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-202ENST00000593891 URGCPQ8TCY9 931 aa13.46□□□□□ -0.25
ZNF558-202ENST00000593891 GPRASP2Q96D09 838 aa13.46□□□□□ -0.25
ZNF558-202ENST00000593891 MCRS1Q96EZ8 462 aa13.46□□□□□ -0.25
ZNF558-202ENST00000593891 ZNF334Q9HCZ1 680 aaPredicted RBP13.46□□□□□ -0.25
ZNF558-202ENST00000593891 DKK4Q9UBT3 224 aa13.46□□□□□ -0.25
ZNF558-202ENST00000593891 URB1O60287 2271 aaKnown RBP13.45□□□□□ -0.26
ZNF558-202ENST00000593891 NRP1O14786 923 aa13.45□□□□□ -0.26
ZNF558-202ENST00000593891 HBP1O60381 514 aa13.45□□□□□ -0.26
ZNF558-202ENST00000593891 OFD1O75665 1012 aa13.45□□□□□ -0.26
ZNF558-202ENST00000593891 WISP1O95388 367 aa13.45□□□□□ -0.26
ZNF558-202ENST00000593891 PARP1P09874 1014 aaKnown RBP13.45□□□□□ -0.26
ZNF558-202ENST00000593891 EIF4BP23588 611 aaKnown RBP13.45□□□□□ -0.26
ZNF558-202ENST00000593891 HOXC13P31276 330 aa13.45□□□□□ -0.26
ZNF558-202ENST00000593891 SLC26A2P50443 739 aa13.45□□□□□ -0.26
ZNF558-202ENST00000593891 MLLT6P55198 1093 aaPredicted RBP13.45□□□□□ -0.26
ZNF558-202ENST00000593891 DSG1Q02413 1049 aa13.45□□□□□ -0.26
ZNF558-202ENST00000593891 LMAN2Q12907 356 aa13.45□□□□□ -0.26
ZNF558-202ENST00000593891 LONRF3Q496Y0 759 aa13.45□□□□□ -0.26
ZNF558-202ENST00000593891 PIP4P1Q86T03 277 aa13.45□□□□□ -0.26
ZNF558-202ENST00000593891 GLYCTKQ8IVS8 523 aa13.45□□□□□ -0.26
ZNF558-202ENST00000593891 METTL13Q8N6R0 699 aa13.45□□□□□ -0.26
ZNF558-202ENST00000593891 ING5Q8WYH8 240 aa13.45□□□□□ -0.26
ZNF558-202ENST00000593891 LPPQ93052 612 aa13.45□□□□□ -0.26
ZNF558-202ENST00000593891 MSANTD3Q96H12 275 aa13.45□□□□□ -0.26
ZNF558-202ENST00000593891 PKD2L1Q9P0L9 805 aa13.45□□□□□ -0.26
ZNF558-202ENST00000593891 MRPS23Q9Y3D9 190 aaKnown RBP13.45□□□□□ -0.26
ZNF558-202ENST00000593891 CELSR3Q9NYQ7 3312 aa13.44□□□□□ -0.26
ZNF558-202ENST00000593891 UPK3BL1B0FP48 263 aa13.44□□□□□ -0.26
ZNF558-202ENST00000593891 UPK3BL2E5RIL1 263 aa13.44□□□□□ -0.26
ZNF558-202ENST00000593891 ZBTB5O15062 677 aa13.44□□□□□ -0.26
ZNF558-202ENST00000593891 CCL16O15467 120 aa13.44□□□□□ -0.26
ZNF558-202ENST00000593891 GDI1P31150 447 aa13.44□□□□□ -0.26
ZNF558-202ENST00000593891 PHKA2P46019 1235 aa13.44□□□□□ -0.26
ZNF558-202ENST00000593891 IRX4P78413 519 aa13.44□□□□□ -0.26
ZNF558-202ENST00000593891 CREMQ03060 361 aa13.44□□□□□ -0.26
ZNF558-202ENST00000593891 HNRNPDQ14103 355 aaKnown RBP13.44□□□□□ -0.26
ZNF558-202ENST00000593891 PABPC1LQ4VXU2 614 aaKnown RBP13.44□□□□□ -0.26
ZNF558-202ENST00000593891 MAP4K3Q8IVH8 894 aa13.44□□□□□ -0.26
ZNF558-202ENST00000593891 FAM9BQ8IZU0 186 aa13.44□□□□□ -0.26
ZNF558-202ENST00000593891 SYNPOQ8N3V7 929 aa13.44□□□□□ -0.26
ZNF558-202ENST00000593891 PNMA1Q8ND90 353 aa13.44□□□□□ -0.26
ZNF558-202ENST00000593891 ZFP14Q9HCL3 533 aa13.44□□□□□ -0.26
ZNF558-202ENST00000593891 JPH1Q9HDC5 661 aaPredicted RBP13.44□□□□□ -0.26
ZNF558-202ENST00000593891 FNIP2Q9P278 1114 aa13.44□□□□□ -0.26
ZNF558-202ENST00000593891 SLC8A2Q9UPR5 921 aa13.44□□□□□ -0.26
ZNF558-202ENST00000593891 MEFVO15553 781 aaPredicted RBP13.43□□□□□ -0.26
ZNF558-202ENST00000593891 PPP1R11O60927 126 aaPredicted RBP13.43□□□□□ -0.26
ZNF558-202ENST00000593891 DDHD2O94830 711 aa13.43□□□□□ -0.26
ZNF558-202ENST00000593891 LAMA1P25391 3075 aa13.43□□□□□ -0.26
ZNF558-202ENST00000593891 HOXA9P31269 272 aa13.43□□□□□ -0.26
ZNF558-202ENST00000593891 NLRP11P59045 1033 aaKnown RBP13.43□□□□□ -0.26
ZNF558-202ENST00000593891 KARSQ15046 597 aaKnown RBP13.43□□□□□ -0.26
ZNF558-202ENST00000593891 ZNF484Q5JVG2 852 aa13.43□□□□□ -0.26
ZNF558-202ENST00000593891 DGKHQ86XP1 1220 aa13.43□□□□□ -0.26
ZNF558-202ENST00000593891 APOL6Q9BWW8 343 aa13.43□□□□□ -0.26
ZNF558-202ENST00000593891 KAT14Q9H8E8 782 aa13.43□□□□□ -0.26
ZNF558-202ENST00000593891 CHST12Q9NRB3 414 aa13.43□□□□□ -0.26
ZNF558-202ENST00000593891 KANSL3Q9P2N6 904 aa13.43□□□□□ -0.26
ZNF558-202ENST00000593891 SLC9A2Q9UBY0 812 aa13.43□□□□□ -0.26
ZNF558-202ENST00000593891 COL1A2P08123 1366 aa13.43□□□□□ -0.26
ZNF558-202ENST00000593891 SPTAN1Q13813 2472 aaKnown RBP13.42□□□□□ -0.26
ZNF558-202ENST00000593891 CCDC194A0A1B0GVG4 234 aa13.42□□□□□ -0.26
ZNF558-202ENST00000593891 EXTL3O43909 919 aa13.42□□□□□ -0.26
ZNF558-202ENST00000593891 B4GALT3O60512 393 aa13.42□□□□□ -0.26
ZNF558-202ENST00000593891 RAB11FIP3O75154 756 aa13.42□□□□□ -0.26
ZNF558-202ENST00000593891 C8AP07357 584 aa13.42□□□□□ -0.26
ZNF558-202ENST00000593891 MAPK8P45983 427 aa13.42□□□□□ -0.26
ZNF558-202ENST00000593891 SEMA3BQ13214 749 aa13.42□□□□□ -0.26
ZNF558-202ENST00000593891 PDXDC1Q6P996 788 aa13.42□□□□□ -0.26
ZNF558-202ENST00000593891 AGMOQ6ZNB7 445 aa13.42□□□□□ -0.26
ZNF558-202ENST00000593891 GPR65Q8IYL9 337 aa13.42□□□□□ -0.26
ZNF558-202ENST00000593891 PIP4K2CQ8TBX8 421 aa13.42□□□□□ -0.26
ZNF558-202ENST00000593891 FAM200AQ8TCP9 573 aa13.42□□□□□ -0.26
ZNF558-202ENST00000593891 CSGALNACT1Q8TDX6 532 aa13.42□□□□□ -0.26
ZNF558-202ENST00000593891 ADAMTS14Q8WXS8 1223 aa13.42□□□□□ -0.26
ZNF558-202ENST00000593891 MBOAT7Q96N66 472 aa13.42□□□□□ -0.26
ZNF558-202ENST00000593891 SEC62Q99442 399 aaKnown RBP13.42□□□□□ -0.26
ZNF558-202ENST00000593891 TRAIPQ9BWF2 469 aa13.42□□□□□ -0.26
ZNF558-202ENST00000593891 C8orf33Q9H7E9 229 aaPredicted RBP13.42□□□□□ -0.26
ZNF558-202ENST00000593891 FBXW11Q9UKB1 542 aa13.42□□□□□ -0.26
ZNF558-202ENST00000593891 PRG3Q9Y2Y8 225 aaPredicted RBP13.42□□□□□ -0.26
ZNF558-202ENST00000593891 PCDHB15Q9Y5E8 787 aa13.42□□□□□ -0.26
ZNF558-202ENST00000593891 CACNA1EQ15878 2313 aa13.42□□□□□ -0.26
ZNF558-202ENST00000593891 PATE3B3GLJ2 98 aa13.41□□□□□ -0.26
ZNF558-202ENST00000593891 PYCARD-AS1I3L0S3 204 aa13.41□□□□□ -0.26
ZNF558-202ENST00000593891 ZNF263O14978 683 aa13.41□□□□□ -0.26
ZNF558-202ENST00000593891 PSMC3P17980 439 aa13.41□□□□□ -0.26
ZNF558-202ENST00000593891 KPNA1P52294 538 aaPredicted RBP13.41□□□□□ -0.26
ZNF558-202ENST00000593891 MTMR1Q13613 665 aa13.41□□□□□ -0.26
ZNF558-202ENST00000593891 TWF2Q6IBS0 349 aaKnown RBP13.41□□□□□ -0.26
ZNF558-202ENST00000593891 TRMT2AQ8IZ69 625 aaKnown RBP13.41□□□□□ -0.26
ZNF558-202ENST00000593891 HDDC3Q8N4P3 179 aa13.41□□□□□ -0.26
ZNF558-202ENST00000593891 FAM181AQ8N9Y4 354 aa13.41□□□□□ -0.26
ZNF558-202ENST00000593891 PGBD4Q96DM1 585 aa13.41□□□□□ -0.26
ZNF558-202ENST00000593891 SCLT1Q96NL6 688 aa13.41□□□□□ -0.26
ZNF558-202ENST00000593891 MAP7D2Q96T17 732 aa13.41□□□□□ -0.26
ZNF558-202ENST00000593891 CHST7Q9NS84 486 aa13.41□□□□□ -0.26
ZNF558-202ENST00000593891 AKT3Q9Y243 479 aa13.41□□□□□ -0.26
ZNF558-202ENST00000593891 MYH7P12883 1935 aa13.41□□□□□ -0.26
ZNF558-202ENST00000593891 ENO4A6NNW6 628 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms