RNA–Protein interactions for RNA: ENST00000590541.1

RETREG3-210, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 409 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-210ENST00000590541 HTR4Q13639 388 aa19.41■□□□□ 0.7
RETREG3-210ENST00000590541 RSPO4Q2I0M5 234 aaPredicted RBP19.41■□□□□ 0.7
RETREG3-210ENST00000590541 ELMSAN1Q6PJG2 1045 aa19.41■□□□□ 0.7
RETREG3-210ENST00000590541 DCLRE1AQ6PJP8 1040 aa19.41■□□□□ 0.7
RETREG3-210ENST00000590541 SPATA31D4Q6ZUB0 917 aa19.41■□□□□ 0.7
RETREG3-210ENST00000590541 COLGALT2Q8IYK4 626 aa19.41■□□□□ 0.7
RETREG3-210ENST00000590541 ST13P5Q8NFI4 369 aaPredicted RBP19.41■□□□□ 0.7
RETREG3-210ENST00000590541 PJA1Q8NG27 643 aa19.41■□□□□ 0.7
RETREG3-210ENST00000590541 CNTNAP3BQ96NU0 1288 aa19.41■□□□□ 0.7
RETREG3-210ENST00000590541 CNTNAP3Q9BZ76 1288 aa19.41■□□□□ 0.7
RETREG3-210ENST00000590541 NT5C3AQ9H0P0 336 aa19.41■□□□□ 0.7
RETREG3-210ENST00000590541 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP19.41■□□□□ 0.7
RETREG3-210ENST00000590541 NID2Q14112 1375 aa19.41■□□□□ 0.7
RETREG3-210ENST00000590541 DDX11L8A8MPP1 907 aa19.4■□□□□ 0.7
RETREG3-210ENST00000590541 F8W810 466 aa19.4■□□□□ 0.7
RETREG3-210ENST00000590541 STARD6P59095 220 aa19.4■□□□□ 0.7
RETREG3-210ENST00000590541 DSG1Q02413 1049 aa19.4■□□□□ 0.7
RETREG3-210ENST00000590541 ANO5Q75V66 913 aa19.4■□□□□ 0.7
RETREG3-210ENST00000590541 GET4Q7L5D6 327 aaPredicted RBP19.4■□□□□ 0.7
RETREG3-210ENST00000590541 BICD2Q8TD16 824 aa19.4■□□□□ 0.7
RETREG3-210ENST00000590541 HDAC7Q8WUI4 952 aa19.4■□□□□ 0.7
RETREG3-210ENST00000590541 BRF1Q92994 677 aa19.4■□□□□ 0.7
RETREG3-210ENST00000590541 MINDY3Q9H8M7 445 aa19.4■□□□□ 0.7
RETREG3-210ENST00000590541 NAP1L2Q9ULW6 460 aaPredicted RBP19.4■□□□□ 0.7
RETREG3-210ENST00000590541 NUMBLQ9Y6R0 609 aa19.4■□□□□ 0.7
RETREG3-210ENST00000590541 CEP250Q9BV73 2442 aa19.39■□□□□ 0.69
RETREG3-210ENST00000590541 NCLP19338 710 aaKnown RBP19.39■□□□□ 0.69
RETREG3-210ENST00000590541 OR1G1P47890 313 aa19.39■□□□□ 0.69
RETREG3-210ENST00000590541 Q4G0T1 1027 aa19.39■□□□□ 0.69
RETREG3-210ENST00000590541 PLA2G4FQ68DD2 849 aa19.39■□□□□ 0.69
RETREG3-210ENST00000590541 PALB2Q86YC2 1186 aa19.39■□□□□ 0.69
RETREG3-210ENST00000590541 SMG8Q8ND04 991 aaKnown RBP19.39■□□□□ 0.69
RETREG3-210ENST00000590541 RPP25Q9BUL9 199 aaKnown RBP19.39■□□□□ 0.69
RETREG3-210ENST00000590541 PLEKHA4Q9H4M7 779 aa19.39■□□□□ 0.69
RETREG3-210ENST00000590541 PIDD1Q9HB75 910 aa19.39■□□□□ 0.69
RETREG3-210ENST00000590541 CHST7Q9NS84 486 aa19.39■□□□□ 0.69
RETREG3-210ENST00000590541 COL4A3BPQ9Y5P4 624 aa19.39■□□□□ 0.69
RETREG3-210ENST00000590541 TGM5O43548 720 aa19.38■□□□□ 0.69
RETREG3-210ENST00000590541 GAS2O43903 313 aaKnown RBP19.38■□□□□ 0.69
RETREG3-210ENST00000590541 KINO60870 393 aaKnown RBP19.38■□□□□ 0.69
RETREG3-210ENST00000590541 EVCP57679 992 aa19.38■□□□□ 0.69
RETREG3-210ENST00000590541 COL4A3Q01955 1670 aa19.38■□□□□ 0.69
RETREG3-210ENST00000590541 DSC1Q08554 894 aa19.38■□□□□ 0.69
RETREG3-210ENST00000590541 PHKBQ93100 1093 aa19.38■□□□□ 0.69
RETREG3-210ENST00000590541 PRKD2Q9BZL6 878 aa19.38■□□□□ 0.69
RETREG3-210ENST00000590541 TM6SF1Q9BZW5 370 aa19.38■□□□□ 0.69
RETREG3-210ENST00000590541 MIOSQ9NXC5 875 aa19.38■□□□□ 0.69
RETREG3-210ENST00000590541 ZDHHC7Q9NXF8 308 aa19.38■□□□□ 0.69
RETREG3-210ENST00000590541 CACNA1IQ9P0X4 2223 aa19.38■□□□□ 0.69
RETREG3-210ENST00000590541 EIF5BO60841 1220 aaKnown RBP19.37■□□□□ 0.69
RETREG3-210ENST00000590541 C1RP00736 705 aa19.37■□□□□ 0.69
RETREG3-210ENST00000590541 CENPBP07199 599 aaPredicted RBP19.37■□□□□ 0.69
RETREG3-210ENST00000590541 CPA1P15085 419 aa19.37■□□□□ 0.69
RETREG3-210ENST00000590541 GPC5P78333 572 aa19.37■□□□□ 0.69
RETREG3-210ENST00000590541 LILRA6Q6PI73 481 aa19.37■□□□□ 0.69
RETREG3-210ENST00000590541 RUFY3Q7L099 469 aa19.37■□□□□ 0.69
RETREG3-210ENST00000590541 SRGAP1Q7Z6B7 1085 aa19.37■□□□□ 0.69
RETREG3-210ENST00000590541 TBCKQ8TEA7 893 aa19.37■□□□□ 0.69
RETREG3-210ENST00000590541 FGF14Q92915 247 aa19.37■□□□□ 0.69
RETREG3-210ENST00000590541 B3GALT6Q96L58 329 aa19.37■□□□□ 0.69
RETREG3-210ENST00000590541 JPH2Q9BR39 696 aaPredicted RBP19.37■□□□□ 0.69
RETREG3-210ENST00000590541 RNF39Q9H2S5 420 aa19.37■□□□□ 0.69
RETREG3-210ENST00000590541 ZSWIM6Q9HCJ5 1215 aa19.37■□□□□ 0.69
RETREG3-210ENST00000590541 VPS54Q9P1Q0 977 aa19.37■□□□□ 0.69
RETREG3-210ENST00000590541 MTCL1Q9Y4B5 1905 aaKnown RBP19.37■□□□□ 0.69
RETREG3-210ENST00000590541 CACNA1BQ00975 2339 aa19.36■□□□□ 0.69
RETREG3-210ENST00000590541 TDP2O95551 362 aa19.36■□□□□ 0.69
RETREG3-210ENST00000590541 SRGAP2CP0DJJ0 459 aa19.36■□□□□ 0.69
RETREG3-210ENST00000590541 ITGA4P13612 1032 aa19.36■□□□□ 0.69
RETREG3-210ENST00000590541 MLH1P40692 756 aa19.36■□□□□ 0.69
RETREG3-210ENST00000590541 NPEPPSP55786 919 aa19.36■□□□□ 0.69
RETREG3-210ENST00000590541 PSMC5P62195 406 aa19.36■□□□□ 0.69
RETREG3-210ENST00000590541 AKAP17AQ02040 695 aaKnown RBP19.36■□□□□ 0.69
RETREG3-210ENST00000590541 NTRK3Q16288 839 aa19.36■□□□□ 0.69
RETREG3-210ENST00000590541 ZNF528Q3MIS6 628 aa19.36■□□□□ 0.69
RETREG3-210ENST00000590541 ZNF579Q8NAF0 562 aaKnown RBP19.36■□□□□ 0.69
RETREG3-210ENST00000590541 CNNM3Q8NE01 707 aa19.36■□□□□ 0.69
RETREG3-210ENST00000590541 CCDC148Q8NFR7 591 aa19.36■□□□□ 0.69
RETREG3-210ENST00000590541 PRPF31Q8WWY3 499 aaKnown RBP19.36■□□□□ 0.69
RETREG3-210ENST00000590541 GAD1Q99259 594 aa19.36■□□□□ 0.69
RETREG3-210ENST00000590541 DDX23Q9BUQ8 820 aaKnown RBP19.36■□□□□ 0.69
RETREG3-210ENST00000590541 UBN1Q9NPG3 1134 aa19.36■□□□□ 0.69
RETREG3-210ENST00000590541 IPPQ9Y573 584 aa19.36■□□□□ 0.69
RETREG3-210ENST00000590541 CYP46A1Q9Y6A2 500 aa19.36■□□□□ 0.69
RETREG3-210ENST00000590541 GPR179Q6PRD1 2367 aa19.35■□□□□ 0.69
RETREG3-210ENST00000590541 CYP3A7-CYP3A51PA0A087WV96 503 aa19.35■□□□□ 0.69
RETREG3-210ENST00000590541 KANSL1LA0AUZ9 987 aa19.35■□□□□ 0.69
RETREG3-210ENST00000590541 ARL5CA6NH57 179 aa19.35■□□□□ 0.69
RETREG3-210ENST00000590541 CYP3A7P24462 503 aa19.35■□□□□ 0.69
RETREG3-210ENST00000590541 SCNN1GP51170 649 aa19.35■□□□□ 0.69
RETREG3-210ENST00000590541 SNW1Q13573 536 aaKnown RBP19.35■□□□□ 0.69
RETREG3-210ENST00000590541 VARS2Q5ST30 1063 aaKnown RBP19.35■□□□□ 0.69
RETREG3-210ENST00000590541 PARM1Q6UWI2 310 aa19.35■□□□□ 0.69
RETREG3-210ENST00000590541 GLYCTKQ8IVS8 523 aa19.35■□□□□ 0.69
RETREG3-210ENST00000590541 ETNPPLQ8TBG4 499 aa19.35■□□□□ 0.69
RETREG3-210ENST00000590541 TMEM143Q96AN5 459 aa19.35■□□□□ 0.69
RETREG3-210ENST00000590541 SHDQ96IW2 340 aa19.35■□□□□ 0.69
RETREG3-210ENST00000590541 EIF2AQ9BY44 585 aaKnown RBP19.35■□□□□ 0.69
RETREG3-210ENST00000590541 RNF26Q9BY78 433 aaPredicted RBP19.35■□□□□ 0.69
RETREG3-210ENST00000590541 GPR62Q9BZJ7 368 aa19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms