RNA–Protein interactions for RNA: ENST00000587945.1

VMP1-206, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-206ENST00000587945 CARNS1A5YM72 827 aa15.92■□□□□ 0.14
VMP1-206ENST00000587945 TMEM221A6NGB7 291 aa15.92■□□□□ 0.14
VMP1-206ENST00000587945 ARL5CA6NH57 179 aa15.92■□□□□ 0.14
VMP1-206ENST00000587945 M0R296 226 aa15.92■□□□□ 0.14
VMP1-206ENST00000587945 XRCC6P12956 609 aaKnown RBP eCLIP15.92■□□□□ 0.14
VMP1-206ENST00000587945 SCNN1GP51170 649 aa15.92■□□□□ 0.14
VMP1-206ENST00000587945 POU5F1BQ06416 359 aa15.92■□□□□ 0.14
VMP1-206ENST00000587945 NBR1Q14596 966 aa15.92■□□□□ 0.14
VMP1-206ENST00000587945 PCBP1Q15365 356 aaKnown RBP eCLIP15.92■□□□□ 0.14
VMP1-206ENST00000587945 CES5AQ6NT32 575 aa15.92■□□□□ 0.14
VMP1-206ENST00000587945 POTEGQ6S5H5 508 aa15.92■□□□□ 0.14
VMP1-206ENST00000587945 TAS1R1Q7RTX1 841 aa15.92■□□□□ 0.14
VMP1-206ENST00000587945 CNNM3Q8NE01 707 aa15.92■□□□□ 0.14
VMP1-206ENST00000587945 CCDC51Q96ER9 411 aa15.92■□□□□ 0.14
VMP1-206ENST00000587945 ZFP42Q96MM3 310 aa15.92■□□□□ 0.14
VMP1-206ENST00000587945 LLPHQ9BRT6 129 aaKnown RBP15.92■□□□□ 0.14
VMP1-206ENST00000587945 NXF3Q9H4D5 531 aaKnown RBP15.92■□□□□ 0.14
VMP1-206ENST00000587945 TUFT1Q9NNX1 390 aa15.92■□□□□ 0.14
VMP1-206ENST00000587945 MARCH5Q9NX47 278 aa15.92■□□□□ 0.14
VMP1-206ENST00000587945 LRRIQ4A6NIV6 560 aa15.91■□□□□ 0.14
VMP1-206ENST00000587945 F8W810 466 aa15.91■□□□□ 0.14
VMP1-206ENST00000587945 C2CD2LO14523 706 aa15.91■□□□□ 0.14
VMP1-206ENST00000587945 NPTXRO95502 500 aa15.91■□□□□ 0.14
VMP1-206ENST00000587945 OR52Z1P0C646 297 aa15.91■□□□□ 0.14
VMP1-206ENST00000587945 AKAP5P24588 427 aa15.91■□□□□ 0.14
VMP1-206ENST00000587945 OR1G1P47890 313 aa15.91■□□□□ 0.14
VMP1-206ENST00000587945 ITIH3Q06033 890 aa15.91■□□□□ 0.14
VMP1-206ENST00000587945 GIT2Q14161 759 aa15.91■□□□□ 0.14
VMP1-206ENST00000587945 COLGALT2Q8IYK4 626 aa15.91■□□□□ 0.14
VMP1-206ENST00000587945 FBXO18Q8NFZ0 1043 aa15.91■□□□□ 0.14
VMP1-206ENST00000587945 MFSD14AQ96MC6 490 aa15.91■□□□□ 0.14
VMP1-206ENST00000587945 FBXL18Q96ME1 805 aa15.91■□□□□ 0.14
VMP1-206ENST00000587945 KLHL5Q96PQ7 755 aa15.91■□□□□ 0.14
VMP1-206ENST00000587945 POLR3CQ9BUI4 534 aaPredicted RBP15.91■□□□□ 0.14
VMP1-206ENST00000587945 NFKBIZQ9BYH8 718 aa15.91■□□□□ 0.14
VMP1-206ENST00000587945 TRIM6Q9C030 488 aaPredicted RBP15.91■□□□□ 0.14
VMP1-206ENST00000587945 FOXP1Q9H334 677 aaPredicted RBP15.91■□□□□ 0.14
VMP1-206ENST00000587945 UBN1Q9NPG3 1134 aa15.91■□□□□ 0.14
VMP1-206ENST00000587945 C2CD4DB7Z1M9 353 aa15.9■□□□□ 0.14
VMP1-206ENST00000587945 INPPL1O15357 1258 aa15.9■□□□□ 0.14
VMP1-206ENST00000587945 LILRB3O75022 631 aa15.9■□□□□ 0.14
VMP1-206ENST00000587945 CNPP09543 421 aaKnown RBP15.9■□□□□ 0.14
VMP1-206ENST00000587945 KLRC2P26717 231 aa15.9■□□□□ 0.14
VMP1-206ENST00000587945 RBM25P49756 843 aaKnown RBP15.9■□□□□ 0.14
VMP1-206ENST00000587945 C8orf34Q49A92 452 aa15.9■□□□□ 0.14
VMP1-206ENST00000587945 TTC38Q5R3I4 469 aa15.9■□□□□ 0.14
VMP1-206ENST00000587945 TMC5Q6UXY8 1006 aa15.9■□□□□ 0.14
VMP1-206ENST00000587945 CABP7Q86V35 215 aa15.9■□□□□ 0.14
VMP1-206ENST00000587945 FAM184AQ8NB25 1140 aa15.9■□□□□ 0.14
VMP1-206ENST00000587945 BSNDQ8WZ55 320 aa15.9■□□□□ 0.14
VMP1-206ENST00000587945 PBXIP1Q96AQ6 731 aa15.9■□□□□ 0.14
VMP1-206ENST00000587945 ZSCAN31Q96LW9 406 aaPredicted RBP15.9■□□□□ 0.14
VMP1-206ENST00000587945 NACC1Q96RE7 527 aa15.9■□□□□ 0.14
VMP1-206ENST00000587945 POLD4Q9HCU8 107 aa15.9■□□□□ 0.14
VMP1-206ENST00000587945 DZANK1Q9NVP4 752 aa15.9■□□□□ 0.14
VMP1-206ENST00000587945 KLK14Q9P0G3 267 aa15.9■□□□□ 0.14
VMP1-206ENST00000587945 DBR1Q9UK59 544 aaKnown RBP15.9■□□□□ 0.14
VMP1-206ENST00000587945 USP20Q9Y2K6 914 aa15.9■□□□□ 0.14
VMP1-206ENST00000587945 GIT1Q9Y2X7 761 aa15.9■□□□□ 0.14
VMP1-206ENST00000587945 NR2E1Q9Y466 385 aa15.9■□□□□ 0.14
VMP1-206ENST00000587945 TTLL13PA6NNM8 815 aa15.89■□□□□ 0.13
VMP1-206ENST00000587945 RPA1P27694 616 aa15.89■□□□□ 0.13
VMP1-206ENST00000587945 HOXD11P31277 338 aaPredicted RBP15.89■□□□□ 0.13
VMP1-206ENST00000587945 MTHFRP42898 656 aa15.89■□□□□ 0.13
VMP1-206ENST00000587945 HMGN5P82970 282 aaKnown RBP15.89■□□□□ 0.13
VMP1-206ENST00000587945 DSC1Q08554 894 aa15.89■□□□□ 0.13
VMP1-206ENST00000587945 GNL2Q13823 731 aaKnown RBP15.89■□□□□ 0.13
VMP1-206ENST00000587945 ECM1Q16610 540 aa15.89■□□□□ 0.13
VMP1-206ENST00000587945 PTPN21Q16825 1174 aa15.89■□□□□ 0.13
VMP1-206ENST00000587945 ZBTB33Q86T24 672 aa15.89■□□□□ 0.13
VMP1-206ENST00000587945 NOSTRINQ8IVI9 506 aa15.89■□□□□ 0.13
VMP1-206ENST00000587945 MCPH1Q8NEM0 835 aa15.89■□□□□ 0.13
VMP1-206ENST00000587945 ERMNQ8TAM6 284 aa15.89■□□□□ 0.13
VMP1-206ENST00000587945 RABGGTAQ92696 567 aa15.89■□□□□ 0.13
VMP1-206ENST00000587945 RIPOR3Q96MK2 946 aa15.89■□□□□ 0.13
VMP1-206ENST00000587945 NECTIN4Q96NY8 510 aa15.89■□□□□ 0.13
VMP1-206ENST00000587945 EMILIN2Q9BXX0 1053 aa15.89■□□□□ 0.13
VMP1-206ENST00000587945 MRPL17Q9NRX2 175 aaKnown RBP15.89■□□□□ 0.13
VMP1-206ENST00000587945 PARP2Q9UGN5 583 aa15.89■□□□□ 0.13
VMP1-206ENST00000587945 TECTAO75443 2155 aa15.88■□□□□ 0.13
VMP1-206ENST00000587945 A0A1B0GUA9 196 aa15.88■□□□□ 0.13
VMP1-206ENST00000587945 ARHGEF35A5YM69 484 aa15.88■□□□□ 0.13
VMP1-206ENST00000587945 SOD2P04179 222 aa15.88■□□□□ 0.13
VMP1-206ENST00000587945 URODP06132 367 aa15.88■□□□□ 0.13
VMP1-206ENST00000587945 MYBP10242 640 aa15.88■□□□□ 0.13
VMP1-206ENST00000587945 LIG1P18858 919 aa15.88■□□□□ 0.13
VMP1-206ENST00000587945 CLCN4P51793 760 aa15.88■□□□□ 0.13
VMP1-206ENST00000587945 SIGLEC14Q08ET2 396 aa15.88■□□□□ 0.13
VMP1-206ENST00000587945 ATAT1Q5SQI0 421 aa15.88■□□□□ 0.13
VMP1-206ENST00000587945 KIAA1841Q6NSI8 718 aa15.88■□□□□ 0.13
VMP1-206ENST00000587945 SLC27A1Q6PCB7 646 aa15.88■□□□□ 0.13
VMP1-206ENST00000587945 PADI6Q6TGC4 694 aa15.88■□□□□ 0.13
VMP1-206ENST00000587945 BMP8AQ7Z5Y6 402 aa15.88■□□□□ 0.13
VMP1-206ENST00000587945 PPFIBP1Q86W92 1011 aa15.88■□□□□ 0.13
VMP1-206ENST00000587945 HACE1Q8IYU2 909 aa15.88■□□□□ 0.13
VMP1-206ENST00000587945 C4orf32Q8N8J7 132 aa15.88■□□□□ 0.13
VMP1-206ENST00000587945 KREMEN2Q8NCW0 462 aa15.88■□□□□ 0.13
VMP1-206ENST00000587945 GSTCDQ8NEC7 633 aa15.88■□□□□ 0.13
VMP1-206ENST00000587945 HERC2P3Q9BVR0 1158 aa15.88■□□□□ 0.13
VMP1-206ENST00000587945 SH2B1Q9NRF2 756 aaPredicted RBP15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms