RNA–Protein interactions for RNA: ENST00000582772.1

MSI2-216, Transcript of musashi RNA binding protein 2, human

TSL 3

Gene MSI2, Length 398 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-216	ENST00000582772	RYR3	Q15413	4870 aa		5.89	□□□□□ -1.47
MSI2-216	ENST00000582772	NSD1	Q96L73	2696 aa	Predicted RBP	5.89	□□□□□ -1.47
MSI2-216	ENST00000582772	MBLAC1	A4D2B0	266 aa	Predicted RBP	5.89	□□□□□ -1.47
MSI2-216	ENST00000582772	ARHGAP33	O14559	1287 aa		5.89	□□□□□ -1.47
MSI2-216	ENST00000582772	MGEA5	O60502	916 aa		5.89	□□□□□ -1.47
MSI2-216	ENST00000582772	ATG13	O75143	517 aa		5.89	□□□□□ -1.47
MSI2-216	ENST00000582772	NBPF7	P0C2Y1	421 aa	Predicted RBP	5.89	□□□□□ -1.47
MSI2-216	ENST00000582772	DRD2	P14416	443 aa		5.89	□□□□□ -1.47
MSI2-216	ENST00000582772	FCAR	P24071	287 aa		5.89	□□□□□ -1.47
MSI2-216	ENST00000582772	INHBC	P55103	352 aa		5.89	□□□□□ -1.47
MSI2-216	ENST00000582772	BCAR1	P56945	870 aa		5.89	□□□□□ -1.47
MSI2-216	ENST00000582772	PCBP4	P57723	403 aa	Known RBP	5.89	□□□□□ -1.47
MSI2-216	ENST00000582772	DYNLL1	P63167	89 aa	Known RBP	5.89	□□□□□ -1.47
MSI2-216	ENST00000582772	MRPS6	P82932	125 aa	Known RBP	5.89	□□□□□ -1.47
MSI2-216	ENST00000582772	IGFBP7	Q16270	282 aa		5.89	□□□□□ -1.47
MSI2-216	ENST00000582772	PTPRN	Q16849	979 aa		5.89	□□□□□ -1.47
MSI2-216	ENST00000582772	HSDL1	Q3SXM5	330 aa		5.89	□□□□□ -1.47
MSI2-216	ENST00000582772	LINC00303	Q3SY05	128 aa		5.89	□□□□□ -1.47
MSI2-216	ENST00000582772	MYSM1	Q5VVJ2	828 aa		5.89	□□□□□ -1.47
MSI2-216	ENST00000582772	TMED8	Q6PL24	325 aa	Predicted RBP	5.89	□□□□□ -1.47
MSI2-216	ENST00000582772	CXXC5	Q7LFL8	322 aa	Known RBP	5.89	□□□□□ -1.47
MSI2-216	ENST00000582772	SLC34A3	Q8N130	599 aa		5.89	□□□□□ -1.47
MSI2-216	ENST00000582772	DAGLB	Q8NCG7	672 aa		5.89	□□□□□ -1.47
MSI2-216	ENST00000582772	CDC6	Q99741	560 aa		5.89	□□□□□ -1.47
MSI2-216	ENST00000582772	CLSTN3	Q9BQT9	956 aa		5.89	□□□□□ -1.47
MSI2-216	ENST00000582772	GTPBP2	Q9BX10	602 aa	Known RBP	5.89	□□□□□ -1.47
MSI2-216	ENST00000582772	DPH1	Q9BZG8	443 aa		5.89	□□□□□ -1.47
MSI2-216	ENST00000582772	KDM4C	Q9H3R0	1056 aa		5.89	□□□□□ -1.47
MSI2-216	ENST00000582772	C8orf33	Q9H7E9	229 aa	Predicted RBP	5.89	□□□□□ -1.47
MSI2-216	ENST00000582772	CBX8	Q9HC52	389 aa		5.89	□□□□□ -1.47
MSI2-216	ENST00000582772	KMT2C	Q8NEZ4	4911 aa	Known RBP	5.89	□□□□□ -1.47
MSI2-216	ENST00000582772	BAZ2A	Q9UIF9	1905 aa	Known RBP	5.88	□□□□□ -1.47
MSI2-216	ENST00000582772	PTPDC1	A2A3K4	754 aa		5.88	□□□□□ -1.47
MSI2-216	ENST00000582772	MYBPHL	A2RUH7	354 aa		5.88	□□□□□ -1.47
MSI2-216	ENST00000582772	BRINP1	O60477	761 aa		5.88	□□□□□ -1.47
MSI2-216	ENST00000582772	PLA2G6	O60733	806 aa		5.88	□□□□□ -1.47
MSI2-216	ENST00000582772	ATXN1L	P0C7T5	689 aa	Known RBP	5.88	□□□□□ -1.47
MSI2-216	ENST00000582772	ZNF883	P0CG24	379 aa		5.88	□□□□□ -1.47
MSI2-216	ENST00000582772	HOXA9	P31269	272 aa		5.88	□□□□□ -1.47
MSI2-216	ENST00000582772	HNF1B	P35680	557 aa		5.88	□□□□□ -1.47
MSI2-216	ENST00000582772	METAP2	P50579	478 aa	Known RBP eCLIP	5.88	□□□□□ -1.47
MSI2-216	ENST00000582772	STAT2	P52630	851 aa		5.88	□□□□□ -1.47
MSI2-216	ENST00000582772	DUOXA1	Q1HG43	343 aa		5.88	□□□□□ -1.47
MSI2-216	ENST00000582772	AXDND1	Q5T1B0	1012 aa	Predicted RBP	5.88	□□□□□ -1.47
MSI2-216	ENST00000582772	KIAA1614	Q5VZ46	1190 aa		5.88	□□□□□ -1.47
MSI2-216	ENST00000582772	PKN3	Q6P5Z2	889 aa		5.88	□□□□□ -1.47
MSI2-216	ENST00000582772	SLC30A10	Q6XR72	485 aa		5.88	□□□□□ -1.47
MSI2-216	ENST00000582772	DBX2	Q6ZNG2	339 aa		5.88	□□□□□ -1.47
MSI2-216	ENST00000582772	OXER1	Q8TDS5	423 aa		5.88	□□□□□ -1.47
MSI2-216	ENST00000582772	GNL3	Q9BVP2	549 aa	Known RBP eCLIP	5.88	□□□□□ -1.47
MSI2-216	ENST00000582772	TRMT61B	Q9BVS5	477 aa	Known RBP	5.88	□□□□□ -1.47
MSI2-216	ENST00000582772	MRPL9	Q9BYD2	267 aa	Known RBP	5.88	□□□□□ -1.47
MSI2-216	ENST00000582772	KRTAP17-1	Q9BYP8	105 aa		5.88	□□□□□ -1.47
MSI2-216	ENST00000582772	SNRK	Q9NRH2	765 aa		5.88	□□□□□ -1.47
MSI2-216	ENST00000582772	NYAP2	Q9P242	653 aa		5.88	□□□□□ -1.47
MSI2-216	ENST00000582772	AK5	Q9Y6K8	562 aa		5.88	□□□□□ -1.47
MSI2-216	ENST00000582772	ABCB11	O95342	1321 aa		5.88	□□□□□ -1.47
MSI2-216	ENST00000582772	SDK2	Q58EX2	2172 aa		5.87	□□□□□ -1.47
MSI2-216	ENST00000582772	NBEAL2	Q6ZNJ1	2754 aa		5.87	□□□□□ -1.47
MSI2-216	ENST00000582772	DCHS2	Q6V1P9	2916 aa		5.87	□□□□□ -1.47
MSI2-216	ENST00000582772	NFIB	O00712	420 aa		5.87	□□□□□ -1.47
MSI2-216	ENST00000582772	TEX28	O15482	410 aa		5.87	□□□□□ -1.47
MSI2-216	ENST00000582772	AGFG2	O95081	481 aa		5.87	□□□□□ -1.47
MSI2-216	ENST00000582772	APBB3	O95704	486 aa		5.87	□□□□□ -1.47
MSI2-216	ENST00000582772	LGALS2	P05162	132 aa		5.87	□□□□□ -1.47
MSI2-216	ENST00000582772	ICAM1	P05362	532 aa		5.87	□□□□□ -1.47
MSI2-216	ENST00000582772	SYP	P08247	313 aa		5.87	□□□□□ -1.47
MSI2-216	ENST00000582772	HNRNPA1	P09651	372 aa	Known RBP eCLIP	5.87	□□□□□ -1.47
MSI2-216	ENST00000582772	IBSP	P21815	317 aa	Predicted RBP	5.87	□□□□□ -1.47
MSI2-216	ENST00000582772	BCKDHB	P21953	392 aa		5.87	□□□□□ -1.47
MSI2-216	ENST00000582772	COL8A1	P27658	744 aa		5.87	□□□□□ -1.47
MSI2-216	ENST00000582772	CASR	P41180	1078 aa		5.87	□□□□□ -1.47
MSI2-216	ENST00000582772	DHPS	P49366	369 aa	Predicted RBP	5.87	□□□□□ -1.47
MSI2-216	ENST00000582772	GNAI1	P63096	354 aa		5.87	□□□□□ -1.47
MSI2-216	ENST00000582772	RNASEL	Q05823	741 aa	Known RBP	5.87	□□□□□ -1.47
MSI2-216	ENST00000582772	NOLC1	Q14978	699 aa	Known RBP eCLIP	5.87	□□□□□ -1.47
MSI2-216	ENST00000582772	TANGO2	Q6ICL3	276 aa		5.87	□□□□□ -1.47
MSI2-216	ENST00000582772	GRASP	Q7Z6J2	395 aa	Predicted RBP	5.87	□□□□□ -1.47
MSI2-216	ENST00000582772	FAM160B2	Q86V87	743 aa		5.87	□□□□□ -1.47
MSI2-216	ENST00000582772	RALGPS2	Q86X27	583 aa	Predicted RBP	5.87	□□□□□ -1.47
MSI2-216	ENST00000582772	TSPYL6	Q8N831	410 aa		5.87	□□□□□ -1.47
MSI2-216	ENST00000582772	GMCL1P1	Q8NEA9	526 aa		5.87	□□□□□ -1.47
MSI2-216	ENST00000582772	ITFG1	Q8TB96	612 aa		5.87	□□□□□ -1.47
MSI2-216	ENST00000582772	PIGO	Q8TEQ8	1089 aa		5.87	□□□□□ -1.47
MSI2-216	ENST00000582772	BCL7C	Q8WUZ0	217 aa	Predicted RBP	5.87	□□□□□ -1.47
MSI2-216	ENST00000582772	GAD1	Q99259	594 aa		5.87	□□□□□ -1.47
MSI2-216	ENST00000582772	ADAM2	Q99965	735 aa		5.87	□□□□□ -1.47
MSI2-216	ENST00000582772	MAF1	Q9H063	256 aa		5.87	□□□□□ -1.47
MSI2-216	ENST00000582772	RXFP1	Q9HBX9	757 aa		5.87	□□□□□ -1.47
MSI2-216	ENST00000582772	MRPL17	Q9NRX2	175 aa	Known RBP	5.87	□□□□□ -1.47
MSI2-216	ENST00000582772	DONSON	Q9NYP3	566 aa		5.87	□□□□□ -1.47
MSI2-216	ENST00000582772	SSX2IP	Q9Y2D8	614 aa		5.87	□□□□□ -1.47
MSI2-216	ENST00000582772		A0A087X0B3	334 aa		5.86	□□□□□ -1.47
MSI2-216	ENST00000582772	ESYT2	A0FGR8	921 aa		5.86	□□□□□ -1.47
MSI2-216	ENST00000582772	NT5C1B-RDH14	C9J2C7	533 aa		5.86	□□□□□ -1.47
MSI2-216	ENST00000582772	PPFIA2	O75334	1257 aa		5.86	□□□□□ -1.47
MSI2-216	ENST00000582772	RECQL4	O94761	1208 aa		5.86	□□□□□ -1.47
MSI2-216	ENST00000582772	DDAH2	O95865	285 aa		5.86	□□□□□ -1.47
MSI2-216	ENST00000582772	RNF224	P0DH78	156 aa		5.86	□□□□□ -1.47
MSI2-216	ENST00000582772	CHRM1	P11229	460 aa	Predicted RBP	5.86	□□□□□ -1.47

Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms