RNA–Protein interactions for RNA: ENST00000575711.1

RPAIN-217, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 732 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-217ENST00000575711 MYH11P35749 1972 aa15.35■□□□□ 0.05
RPAIN-217ENST00000575711 A0A0U1RQF3 1178 aa15.34■□□□□ 0.05
RPAIN-217ENST00000575711 A0A1W2PPC1 479 aa15.34■□□□□ 0.05
RPAIN-217ENST00000575711 TTLL13PA6NNM8 815 aa15.34■□□□□ 0.05
RPAIN-217ENST00000575711 C9IYK1 514 aa15.34■□□□□ 0.05
RPAIN-217ENST00000575711 EIF3DO15371 548 aaKnown RBP eCLIP15.34■□□□□ 0.05
RPAIN-217ENST00000575711 STAG3L1P0CL83 205 aa15.34■□□□□ 0.05
RPAIN-217ENST00000575711 IBSPP21815 317 aaPredicted RBP15.34■□□□□ 0.05
RPAIN-217ENST00000575711 LIG4P49917 911 aa15.34■□□□□ 0.05
RPAIN-217ENST00000575711 CAMK4Q16566 473 aa15.34■□□□□ 0.05
RPAIN-217ENST00000575711 SLC27A1Q6PCB7 646 aa15.34■□□□□ 0.05
RPAIN-217ENST00000575711 ZPBP2Q6X784 338 aa15.34■□□□□ 0.05
RPAIN-217ENST00000575711 ERCC4Q92889 916 aaPredicted RBP15.34■□□□□ 0.05
RPAIN-217ENST00000575711 ACCSQ96QU6 501 aa15.34■□□□□ 0.05
RPAIN-217ENST00000575711 ACO2Q99798 780 aaKnown RBP15.34■□□□□ 0.05
RPAIN-217ENST00000575711 STRA6Q9BX79 667 aa15.34■□□□□ 0.05
RPAIN-217ENST00000575711 FGFBP2Q9BYJ0 223 aa15.34■□□□□ 0.05
RPAIN-217ENST00000575711 NUP62CLQ9H1M0 184 aa15.34■□□□□ 0.05
RPAIN-217ENST00000575711 CLSTN2Q9H4D0 955 aa15.34■□□□□ 0.05
RPAIN-217ENST00000575711 PDZD7Q9H5P4 517 aa15.34■□□□□ 0.05
RPAIN-217ENST00000575711 TMEM206Q9H813 350 aa15.34■□□□□ 0.05
RPAIN-217ENST00000575711 FAM105AQ9NUU6 356 aa15.34■□□□□ 0.05
RPAIN-217ENST00000575711 LRFN2Q9ULH4 789 aa15.34■□□□□ 0.05
RPAIN-217ENST00000575711 COLQQ9Y215 455 aaPredicted RBP15.34■□□□□ 0.05
RPAIN-217ENST00000575711 TNFSF13BQ9Y275 285 aa15.34■□□□□ 0.05
RPAIN-217ENST00000575711 PCDHA5Q9Y5H7 936 aa15.34■□□□□ 0.05
RPAIN-217ENST00000575711 UBE4BO95155 1302 aa15.34■□□□□ 0.05
RPAIN-217ENST00000575711 HNRNPDLO14979 420 aaKnown RBP15.33■□□□□ 0.04
RPAIN-217ENST00000575711 TOM1L1O75674 476 aa15.33■□□□□ 0.04
RPAIN-217ENST00000575711 PRPF6O94906 941 aaKnown RBP15.33■□□□□ 0.04
RPAIN-217ENST00000575711 NPTXRO95502 500 aa15.33■□□□□ 0.04
RPAIN-217ENST00000575711 PIGRP01833 764 aa15.33■□□□□ 0.04
RPAIN-217ENST00000575711 ATP2A2P16615 1042 aaKnown RBP15.33■□□□□ 0.04
RPAIN-217ENST00000575711 MATR3P43243 847 aaKnown RBP eCLIP15.33■□□□□ 0.04
RPAIN-217ENST00000575711 FAM189BP81408 668 aa15.33■□□□□ 0.04
RPAIN-217ENST00000575711 STK4Q13043 487 aa15.33■□□□□ 0.04
RPAIN-217ENST00000575711 DCAF4L1Q3SXM0 396 aa15.33■□□□□ 0.04
RPAIN-217ENST00000575711 UBXN11Q5T124 520 aa15.33■□□□□ 0.04
RPAIN-217ENST00000575711 CDR2LQ86X02 465 aaPredicted RBP15.33■□□□□ 0.04
RPAIN-217ENST00000575711 ECHDC2Q86YB7 292 aa15.33■□□□□ 0.04
RPAIN-217ENST00000575711 NPAS4Q8IUM7 802 aa15.33■□□□□ 0.04
RPAIN-217ENST00000575711 HACE1Q8IYU2 909 aa15.33■□□□□ 0.04
RPAIN-217ENST00000575711 SYCP3Q8IZU3 236 aa15.33■□□□□ 0.04
RPAIN-217ENST00000575711 SPATA20Q8TB22 786 aa15.33■□□□□ 0.04
RPAIN-217ENST00000575711 TOP1MTQ969P6 601 aa15.33■□□□□ 0.04
RPAIN-217ENST00000575711 TCHPQ9BT92 498 aa15.33■□□□□ 0.04
RPAIN-217ENST00000575711 ELAC1Q9H777 363 aaKnown RBP15.33■□□□□ 0.04
RPAIN-217ENST00000575711 PCDHB7Q9Y5E2 793 aa15.33■□□□□ 0.04
RPAIN-217ENST00000575711 PCDHB2Q9Y5E7 798 aa15.33■□□□□ 0.04
RPAIN-217ENST00000575711 ZNF623O75123 536 aa15.32■□□□□ 0.04
RPAIN-217ENST00000575711 UPP2O95045 317 aa15.32■□□□□ 0.04
RPAIN-217ENST00000575711 KIF20AO95235 890 aa15.32■□□□□ 0.04
RPAIN-217ENST00000575711 ZNF568Q3ZCX4 644 aa15.32■□□□□ 0.04
RPAIN-217ENST00000575711 EEF1DP3Q658K8 133 aa15.32■□□□□ 0.04
RPAIN-217ENST00000575711 MPZL3Q6UWV2 235 aa15.32■□□□□ 0.04
RPAIN-217ENST00000575711 EPM2AIP1Q7L775 607 aaPredicted RBP15.32■□□□□ 0.04
RPAIN-217ENST00000575711 KIAA0895Q8NCT3 520 aa15.32■□□□□ 0.04
RPAIN-217ENST00000575711 GLIS3Q8NEA6 775 aa15.32■□□□□ 0.04
RPAIN-217ENST00000575711 ZNF507Q8TCN5 953 aa15.32■□□□□ 0.04
RPAIN-217ENST00000575711 SCFD1Q8WVM8 642 aa15.32■□□□□ 0.04
RPAIN-217ENST00000575711 PGBD4Q96DM1 585 aa15.32■□□□□ 0.04
RPAIN-217ENST00000575711 EIF2AQ9BY44 585 aaKnown RBP15.32■□□□□ 0.04
RPAIN-217ENST00000575711 GTPBP4Q9BZE4 634 aaKnown RBP15.32■□□□□ 0.04
RPAIN-217ENST00000575711 TMEM161AQ9NX61 479 aa15.32■□□□□ 0.04
RPAIN-217ENST00000575711 ANKFY1Q9P2R3 1169 aa15.32■□□□□ 0.04
RPAIN-217ENST00000575711 MICAL3Q7RTP6 2002 aa15.31■□□□□ 0.04
RPAIN-217ENST00000575711 CLDN3O15551 220 aa15.31■□□□□ 0.04
RPAIN-217ENST00000575711 EOMESO95936 686 aa15.31■□□□□ 0.04
RPAIN-217ENST00000575711 PROZP22891 400 aa15.31■□□□□ 0.04
RPAIN-217ENST00000575711 KCNA1Q09470 495 aa15.31■□□□□ 0.04
RPAIN-217ENST00000575711 BMT2Q1RMZ1 405 aa15.31■□□□□ 0.04
RPAIN-217ENST00000575711 ZNF658Q5TYW1 1059 aaPredicted RBP15.31■□□□□ 0.04
RPAIN-217ENST00000575711 SLFN12LQ6IEE8 588 aa15.31■□□□□ 0.04
RPAIN-217ENST00000575711 FAM117BQ6P1L5 589 aa15.31■□□□□ 0.04
RPAIN-217ENST00000575711 HERC6Q8IVU3 1022 aa15.31■□□□□ 0.04
RPAIN-217ENST00000575711 NELFCDQ8IXH7 590 aa15.31■□□□□ 0.04
RPAIN-217ENST00000575711 RNF169Q8NCN4 708 aa15.31■□□□□ 0.04
RPAIN-217ENST00000575711 ZBED2Q9BTP6 218 aa15.31■□□□□ 0.04
RPAIN-217ENST00000575711 CDT1Q9H211 546 aa15.31■□□□□ 0.04
RPAIN-217ENST00000575711 PTPRHQ9HD43 1115 aa15.31■□□□□ 0.04
RPAIN-217ENST00000575711 MAN1B1Q9UKM7 699 aa15.31■□□□□ 0.04
RPAIN-217ENST00000575711 IPPQ9Y573 584 aa15.31■□□□□ 0.04
RPAIN-217ENST00000575711 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.3■□□□□ 0.04
RPAIN-217ENST00000575711 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.3■□□□□ 0.04
RPAIN-217ENST00000575711 HOXA2O43364 376 aa15.3■□□□□ 0.04
RPAIN-217ENST00000575711 GJB5O95377 273 aa15.3■□□□□ 0.04
RPAIN-217ENST00000575711 MCF2P10911 925 aa15.3■□□□□ 0.04
RPAIN-217ENST00000575711 HARSP12081 509 aaKnown RBP15.3■□□□□ 0.04
RPAIN-217ENST00000575711 MCL1Q07820 350 aa15.3■□□□□ 0.04
RPAIN-217ENST00000575711 NOLC1Q14978 699 aaKnown RBP eCLIP15.3■□□□□ 0.04
RPAIN-217ENST00000575711 TMCO2Q7Z6W1 182 aaPredicted RBP15.3■□□□□ 0.04
RPAIN-217ENST00000575711 MRPL10Q7Z7H8 261 aaKnown RBP15.3■□□□□ 0.04
RPAIN-217ENST00000575711 ZBTB33Q86T24 672 aa15.3■□□□□ 0.04
RPAIN-217ENST00000575711 ZNF598Q86UK7 904 aaKnown RBP15.3■□□□□ 0.04
RPAIN-217ENST00000575711 ZBTB45Q96K62 511 aaPredicted RBP15.3■□□□□ 0.04
RPAIN-217ENST00000575711 APOL6Q9BWW8 343 aa15.3■□□□□ 0.04
RPAIN-217ENST00000575711 GBP3Q9H0R5 595 aa15.3■□□□□ 0.04
RPAIN-217ENST00000575711 KIAA1468Q9P260 1216 aa15.3■□□□□ 0.04
RPAIN-217ENST00000575711 GDAQ9Y2T3 454 aa15.3■□□□□ 0.04
RPAIN-217ENST00000575711 ANKRD63C9JTQ0 380 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms