RNA–Protein interactions for RNA: ENST00000573018.1

ERCC4-204, Transcript of ERCC excision repair 4, endonuclease catalytic subunit, humanhuman

TSL 2

Gene ERCC4, Length 523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4-204ENST00000573018 SPDEFO95238 335 aa4.67□□□□□ -1.66
ERCC4-204ENST00000573018 IGLV2-14P01704 120 aa4.67□□□□□ -1.66
ERCC4-204ENST00000573018 GZMKP49863 264 aa4.67□□□□□ -1.66
ERCC4-204ENST00000573018 WNT3AP56704 352 aa4.67□□□□□ -1.66
ERCC4-204ENST00000573018 FOXF2Q12947 444 aa4.67□□□□□ -1.66
ERCC4-204ENST00000573018 KIAA1841Q6NSI8 718 aa4.67□□□□□ -1.66
ERCC4-204ENST00000573018 TIGD7Q6NT04 549 aaPredicted RBP4.67□□□□□ -1.66
ERCC4-204ENST00000573018 MICALCLQ6ZW33 695 aa4.67□□□□□ -1.66
ERCC4-204ENST00000573018 PHYKPLQ8IUZ5 450 aa4.67□□□□□ -1.66
ERCC4-204ENST00000573018 UNC5BQ8IZJ1 945 aa4.67□□□□□ -1.66
ERCC4-204ENST00000573018 ZNF384Q8TF68 577 aa4.67□□□□□ -1.66
ERCC4-204ENST00000573018 KIAA1586Q9HCI6 787 aa4.67□□□□□ -1.66
ERCC4-204ENST00000573018 TRIM39Q9HCM9 518 aa4.67□□□□□ -1.66
ERCC4-204ENST00000573018 SALL3Q9BXA9 1300 aa4.67□□□□□ -1.66
ERCC4-204ENST00000573018 SETD1BQ9UPS6 1966 aaKnown RBP4.66□□□□□ -1.66
ERCC4-204ENST00000573018 PROB1E7EW31 1015 aa4.66□□□□□ -1.66
ERCC4-204ENST00000573018 PCDH8O95206 1070 aa4.66□□□□□ -1.66
ERCC4-204ENST00000573018 MATN4O95460 622 aa4.66□□□□□ -1.66
ERCC4-204ENST00000573018 ESRRBO95718 433 aa4.66□□□□□ -1.66
ERCC4-204ENST00000573018 ITGAMP11215 1152 aa4.66□□□□□ -1.66
ERCC4-204ENST00000573018 HSP90B1P14625 803 aaKnown RBP4.66□□□□□ -1.66
ERCC4-204ENST00000573018 ABCG1P45844 678 aa4.66□□□□□ -1.66
ERCC4-204ENST00000573018 DUSP2Q05923 314 aa4.66□□□□□ -1.66
ERCC4-204ENST00000573018 MPP3Q13368 585 aa4.66□□□□□ -1.66
ERCC4-204ENST00000573018 ZC3H12BQ5HYM0 836 aaKnown RBP4.66□□□□□ -1.66
ERCC4-204ENST00000573018 LCE1AQ5T7P2 110 aa4.66□□□□□ -1.66
ERCC4-204ENST00000573018 ABHD17BQ5VST6 288 aa4.66□□□□□ -1.66
ERCC4-204ENST00000573018 ZCCHC8Q6NZY4 707 aaKnown RBP4.66□□□□□ -1.66
ERCC4-204ENST00000573018 GPRIN1Q7Z2K8 1008 aa4.66□□□□□ -1.66
ERCC4-204ENST00000573018 ARHGEF25Q86VW2 580 aa4.66□□□□□ -1.66
ERCC4-204ENST00000573018 OR10H5Q8NGA6 315 aa4.66□□□□□ -1.66
ERCC4-204ENST00000573018 CAGE1Q8TC20 777 aa4.66□□□□□ -1.66
ERCC4-204ENST00000573018 SCARB1Q8WTV0 552 aa4.66□□□□□ -1.66
ERCC4-204ENST00000573018 RTF1Q92541 710 aaKnown RBP4.66□□□□□ -1.66
ERCC4-204ENST00000573018 ELF4Q99607 663 aaPredicted RBP4.66□□□□□ -1.66
ERCC4-204ENST00000573018 MRPL4Q9BYD3 311 aaKnown RBP4.66□□□□□ -1.66
ERCC4-204ENST00000573018 SLC29A3Q9BZD2 475 aa4.66□□□□□ -1.66
ERCC4-204ENST00000573018 ALG13Q9NP73 1137 aaKnown RBP4.66□□□□□ -1.66
ERCC4-204ENST00000573018 COL3A1P02461 1466 aaPredicted RBP4.65□□□□□ -1.66
ERCC4-204ENST00000573018 DNAJC9-AS1A6NH13 148 aa4.65□□□□□ -1.67
ERCC4-204ENST00000573018 RBMXL2O75526 392 aaKnown RBP4.65□□□□□ -1.67
ERCC4-204ENST00000573018 LY86O95711 162 aa4.65□□□□□ -1.67
ERCC4-204ENST00000573018 EGR2P11161 476 aaPredicted RBP4.65□□□□□ -1.67
ERCC4-204ENST00000573018 MPLP40238 635 aa4.65□□□□□ -1.67
ERCC4-204ENST00000573018 RANGAP1P46060 587 aaPredicted RBP4.65□□□□□ -1.67
ERCC4-204ENST00000573018 ADCY1Q08828 1119 aa4.65□□□□□ -1.67
ERCC4-204ENST00000573018 RESTQ13127 1097 aa4.65□□□□□ -1.67
ERCC4-204ENST00000573018 BTNL9Q6UXG8 535 aa4.65□□□□□ -1.67
ERCC4-204ENST00000573018 SRRM1Q8IYB3 904 aaKnown RBP4.65□□□□□ -1.67
ERCC4-204ENST00000573018 MSL3Q8N5Y2 521 aaKnown RBP4.65□□□□□ -1.67
ERCC4-204ENST00000573018 RNF169Q8NCN4 708 aa4.65□□□□□ -1.67
ERCC4-204ENST00000573018 PPP1R14CQ8TAE6 165 aa4.65□□□□□ -1.67
ERCC4-204ENST00000573018 SMG7Q92540 1137 aaKnown RBP4.65□□□□□ -1.67
ERCC4-204ENST00000573018 C8orf37Q96NL8 207 aa4.65□□□□□ -1.67
ERCC4-204ENST00000573018 DUSP26Q9BV47 211 aa4.65□□□□□ -1.67
ERCC4-204ENST00000573018 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.65□□□□□ -1.67
ERCC4-204ENST00000573018 RNF181Q9P0P0 153 aa4.65□□□□□ -1.67
ERCC4-204ENST00000573018 USP36Q9P275 1121 aaKnown RBP4.65□□□□□ -1.67
ERCC4-204ENST00000573018 FAM221BA6H8Z2 402 aa4.64□□□□□ -1.67
ERCC4-204ENST00000573018 DIRC3C9JPN6 131 aa4.64□□□□□ -1.67
ERCC4-204ENST00000573018 KCNQ2O43526 872 aa4.64□□□□□ -1.67
ERCC4-204ENST00000573018 ANKS6Q68DC2 871 aa4.64□□□□□ -1.67
ERCC4-204ENST00000573018 TANGO6Q9C0B7 1094 aa4.64□□□□□ -1.67
ERCC4-204ENST00000573018 CABP5Q9NP86 173 aa4.64□□□□□ -1.67
ERCC4-204ENST00000573018 TOMM22Q9NS69 142 aa4.64□□□□□ -1.67
ERCC4-204ENST00000573018 POGKQ9P215 609 aa4.64□□□□□ -1.67
ERCC4-204ENST00000573018 USP15Q9Y4E8 981 aaPredicted RBP4.64□□□□□ -1.67
ERCC4-204ENST00000573018 MGST3O14880 152 aa4.63□□□□□ -1.67
ERCC4-204ENST00000573018 HLA-DOAP06340 250 aa4.63□□□□□ -1.67
ERCC4-204ENST00000573018 SPATA31D3P0C874 917 aa4.63□□□□□ -1.67
ERCC4-204ENST00000573018 BLOC1S1P78537 153 aa4.63□□□□□ -1.67
ERCC4-204ENST00000573018 RBL2Q08999 1139 aa4.63□□□□□ -1.67
ERCC4-204ENST00000573018 SPATA31D4Q6ZUB0 917 aa4.63□□□□□ -1.67
ERCC4-204ENST00000573018 FERMT2Q96AC1 680 aa4.63□□□□□ -1.67
ERCC4-204ENST00000573018 SIRPGQ9P1W8 387 aa4.63□□□□□ -1.67
ERCC4-204ENST00000573018 USP18Q9UMW8 372 aa4.63□□□□□ -1.67
ERCC4-204ENST00000573018 CLCA2Q9UQC9 943 aa4.63□□□□□ -1.67
ERCC4-204ENST00000573018 PCDHB6Q9Y5E3 794 aa4.63□□□□□ -1.67
ERCC4-204ENST00000573018 MYPNQ86TC9 1320 aa4.63□□□□□ -1.67
ERCC4-204ENST00000573018 ZMYM3Q14202 1370 aa4.63□□□□□ -1.67
ERCC4-204ENST00000573018 LRRC3CA6NJW4 275 aa4.62□□□□□ -1.67
ERCC4-204ENST00000573018 ELL2O00472 640 aaPredicted RBP4.62□□□□□ -1.67
ERCC4-204ENST00000573018 RAPGEF3O95398 923 aa4.62□□□□□ -1.67
ERCC4-204ENST00000573018 GTF2F1P35269 517 aaKnown RBP eCLIP4.62□□□□□ -1.67
ERCC4-204ENST00000573018 SIM1P81133 766 aaPredicted RBP4.62□□□□□ -1.67
ERCC4-204ENST00000573018 ZNF460Q14592 562 aa4.62□□□□□ -1.67
ERCC4-204ENST00000573018 RASA3Q14644 834 aa4.62□□□□□ -1.67
ERCC4-204ENST00000573018 DDB1Q16531 1140 aa4.62□□□□□ -1.67
ERCC4-204ENST00000573018 PIK3R6Q5UE93 754 aa4.62□□□□□ -1.67
ERCC4-204ENST00000573018 TAS1R1Q7RTX1 841 aa4.62□□□□□ -1.67
ERCC4-204ENST00000573018 DEPDC7Q96QD5 511 aa4.62□□□□□ -1.67
ERCC4-204ENST00000573018 FDXACB1Q9BRP7 624 aaPredicted RBP4.62□□□□□ -1.67
ERCC4-204ENST00000573018 NCOA5Q9HCD5 579 aaKnown RBP4.62□□□□□ -1.67
ERCC4-204ENST00000573018 FPGT-TNNI3KV9GXZ4 949 aa4.62□□□□□ -1.67
ERCC4-204ENST00000573018 MARCH11A6NNE9 402 aa4.61□□□□□ -1.67
ERCC4-204ENST00000573018 B4E1Z4 1266 aa4.61□□□□□ -1.67
ERCC4-204ENST00000573018 RBP3P10745 1247 aa4.61□□□□□ -1.67
ERCC4-204ENST00000573018 ATP2B1P20020 1258 aa4.61□□□□□ -1.67
ERCC4-204ENST00000573018 CTGFP29279 349 aa4.61□□□□□ -1.67
ERCC4-204ENST00000573018 IGFALSP35858 605 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms