RNA–Protein interactions for RNA: ENST00000572787.1

TOPBP1-210, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 4

Gene TOPBP1, Length 402 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-210ENST00000572787 ERVMER34-1Q9H9K5 563 aa5.54□□□□□ -1.52
TOPBP1-210ENST00000572787 ZNF287Q9HBT7 754 aa5.54□□□□□ -1.52
TOPBP1-210ENST00000572787 SAYSD1Q9NPB0 183 aa5.54□□□□□ -1.52
TOPBP1-210ENST00000572787 PAPOLBQ9NRJ5 636 aaKnown RBP5.54□□□□□ -1.52
TOPBP1-210ENST00000572787 RXFP3Q9NSD7 469 aa5.54□□□□□ -1.52
TOPBP1-210ENST00000572787 TBCCD1Q9NVR7 557 aa5.54□□□□□ -1.52
TOPBP1-210ENST00000572787 TMEM160Q9NX00 188 aa5.54□□□□□ -1.52
TOPBP1-210ENST00000572787 ADPRHL2Q9NX46 363 aa5.54□□□□□ -1.52
TOPBP1-210ENST00000572787 C6orf203Q9P0P8 240 aaPredicted RBP5.54□□□□□ -1.52
TOPBP1-210ENST00000572787 SRP68Q9UHB9 627 aaKnown RBP5.54□□□□□ -1.52
TOPBP1-210ENST00000572787 TUBD1Q9UJT1 453 aa5.54□□□□□ -1.52
TOPBP1-210ENST00000572787 DTNAQ9Y4J8 743 aa5.54□□□□□ -1.52
TOPBP1-210ENST00000572787 RAD54L2Q9Y4B4 1467 aa5.53□□□□□ -1.52
TOPBP1-210ENST00000572787 A0A0B4J269 797 aa5.53□□□□□ -1.52
TOPBP1-210ENST00000572787 BTBD11A6QL63 1104 aa5.53□□□□□ -1.52
TOPBP1-210ENST00000572787 F8W031 263 aaPredicted RBP5.53□□□□□ -1.52
TOPBP1-210ENST00000572787 H7C1D1 291 aa5.53□□□□□ -1.52
TOPBP1-210ENST00000572787 ELL2O00472 640 aaPredicted RBP5.53□□□□□ -1.52
TOPBP1-210ENST00000572787 TRIM38O00635 465 aa5.53□□□□□ -1.52
TOPBP1-210ENST00000572787 FSCN2O14926 492 aa5.53□□□□□ -1.52
TOPBP1-210ENST00000572787 GSTA4O15217 222 aa5.53□□□□□ -1.52
TOPBP1-210ENST00000572787 ZBTB43O43298 467 aa5.53□□□□□ -1.52
TOPBP1-210ENST00000572787 TXNL1O43396 289 aa5.53□□□□□ -1.52
TOPBP1-210ENST00000572787 CLEC3AO75596 197 aa5.53□□□□□ -1.52
TOPBP1-210ENST00000572787 PALMO75781 387 aa5.53□□□□□ -1.52
TOPBP1-210ENST00000572787 SLU7O95391 586 aaKnown RBP5.53□□□□□ -1.52
TOPBP1-210ENST00000572787 ADH1CP00326 375 aa5.53□□□□□ -1.52
TOPBP1-210ENST00000572787 ATP5BP06576 529 aaKnown RBP5.53□□□□□ -1.52
TOPBP1-210ENST00000572787 RARAP10276 462 aa5.53□□□□□ -1.52
TOPBP1-210ENST00000572787 PCP11498 1178 aaKnown RBP5.53□□□□□ -1.52
TOPBP1-210ENST00000572787 ALAS1P13196 640 aa5.53□□□□□ -1.52
TOPBP1-210ENST00000572787 YBX3P16989 372 aaKnown RBP eCLIP5.53□□□□□ -1.52
TOPBP1-210ENST00000572787 GAP43P17677 238 aa5.53□□□□□ -1.52
TOPBP1-210ENST00000572787 PTPRAP18433 802 aa5.53□□□□□ -1.52
TOPBP1-210ENST00000572787 TARSP26639 723 aaKnown RBP5.53□□□□□ -1.52
TOPBP1-210ENST00000572787 GPC1P35052 558 aa5.53□□□□□ -1.52
TOPBP1-210ENST00000572787 NNMTP40261 264 aa5.53□□□□□ -1.52
TOPBP1-210ENST00000572787 USP11P51784 963 aa5.53□□□□□ -1.52
TOPBP1-210ENST00000572787 SMAD3P84022 425 aaKnown RBP5.53□□□□□ -1.52
TOPBP1-210ENST00000572787 SRSF2Q01130 221 aaKnown RBP5.53□□□□□ -1.52
TOPBP1-210ENST00000572787 CHAF1BQ13112 559 aa5.53□□□□□ -1.52
TOPBP1-210ENST00000572787 PRPF4BQ13523 1007 aaKnown RBP5.53□□□□□ -1.52
TOPBP1-210ENST00000572787 CCINQ13939 588 aa5.53□□□□□ -1.52
TOPBP1-210ENST00000572787 COG2Q14746 738 aa5.53□□□□□ -1.52
TOPBP1-210ENST00000572787 PDCD1Q15116 288 aa5.53□□□□□ -1.52
TOPBP1-210ENST00000572787 UBE3CQ15386 1083 aa5.53□□□□□ -1.52
TOPBP1-210ENST00000572787 TMEM266Q2M3C6 531 aa5.53□□□□□ -1.52
TOPBP1-210ENST00000572787 ARSJQ5FYB0 599 aaPredicted RBP5.53□□□□□ -1.52
TOPBP1-210ENST00000572787 FAM47CQ5HY64 1035 aa5.53□□□□□ -1.52
TOPBP1-210ENST00000572787 KLHDC7AQ5VTJ3 777 aa5.53□□□□□ -1.52
TOPBP1-210ENST00000572787 LIN54Q6MZP7 749 aa5.53□□□□□ -1.52
TOPBP1-210ENST00000572787 IYDQ6PHW0 289 aa5.53□□□□□ -1.52
TOPBP1-210ENST00000572787 LRFN4Q6PJG9 635 aa5.53□□□□□ -1.52
TOPBP1-210ENST00000572787 KCNT2Q6UVM3 1135 aa5.53□□□□□ -1.52
TOPBP1-210ENST00000572787 MPRIPQ6WCQ1 1025 aa5.53□□□□□ -1.52
TOPBP1-210ENST00000572787 TMTC3Q6ZXV5 915 aa5.53□□□□□ -1.52
TOPBP1-210ENST00000572787 OVCH1Q7RTY7 1134 aa5.53□□□□□ -1.52
TOPBP1-210ENST00000572787 SLFN11Q7Z7L1 901 aa5.53□□□□□ -1.52
TOPBP1-210ENST00000572787 ZER1Q7Z7L7 766 aa5.53□□□□□ -1.52
TOPBP1-210ENST00000572787 DZIP1Q86YF9 867 aaKnown RBP5.53□□□□□ -1.52
TOPBP1-210ENST00000572787 RIOX2Q8IUF8 465 aa5.53□□□□□ -1.52
TOPBP1-210ENST00000572787 HERC6Q8IVU3 1022 aa5.53□□□□□ -1.52
TOPBP1-210ENST00000572787 CEP97Q8IW35 865 aa5.53□□□□□ -1.52
TOPBP1-210ENST00000572787 TXLNBQ8N3L3 684 aa5.53□□□□□ -1.52
TOPBP1-210ENST00000572787 C2orf69Q8N8R5 385 aa5.53□□□□□ -1.52
TOPBP1-210ENST00000572787 EHBP1Q8NDI1 1231 aa5.53□□□□□ -1.52
TOPBP1-210ENST00000572787 PANK1Q8TE04 598 aa5.53□□□□□ -1.52
TOPBP1-210ENST00000572787 ZNF75CPQ92670 426 aaPredicted RBP5.53□□□□□ -1.52
TOPBP1-210ENST00000572787 CDCA5Q96FF9 252 aa5.53□□□□□ -1.52
TOPBP1-210ENST00000572787 ACSBG1Q96GR2 724 aa5.53□□□□□ -1.52
TOPBP1-210ENST00000572787 FNBP1Q96RU3 617 aa5.53□□□□□ -1.52
TOPBP1-210ENST00000572787 PTPN18Q99952 460 aa5.53□□□□□ -1.52
TOPBP1-210ENST00000572787 HEPHQ9BQS7 1158 aa5.53□□□□□ -1.52
TOPBP1-210ENST00000572787 MXD3Q9BW11 206 aa5.53□□□□□ -1.52
TOPBP1-210ENST00000572787 ACAT2Q9BWD1 397 aa5.53□□□□□ -1.52
TOPBP1-210ENST00000572787 NKX2-4Q9H2Z4 354 aa5.53□□□□□ -1.52
TOPBP1-210ENST00000572787 EPS8L2Q9H6S3 715 aa5.53□□□□□ -1.52
TOPBP1-210ENST00000572787 EIF2B3Q9NR50 452 aaKnown RBP5.53□□□□□ -1.52
TOPBP1-210ENST00000572787 AIPL1Q9NZN9 384 aa5.53□□□□□ -1.52
TOPBP1-210ENST00000572787 CHORDC1Q9UHD1 332 aaPredicted RBP5.53□□□□□ -1.52
TOPBP1-210ENST00000572787 PCOLCE2Q9UKZ9 415 aa5.53□□□□□ -1.52
TOPBP1-210ENST00000572787 OGDHLQ9ULD0 1010 aa5.53□□□□□ -1.52
TOPBP1-210ENST00000572787 PCDHGB4Q9UN71 923 aa5.53□□□□□ -1.52
TOPBP1-210ENST00000572787 CLCA2Q9UQC9 943 aa5.53□□□□□ -1.52
TOPBP1-210ENST00000572787 HIF3AQ9Y2N7 669 aa5.53□□□□□ -1.52
TOPBP1-210ENST00000572787 ZNF451Q9Y4E5 1061 aa5.53□□□□□ -1.52
TOPBP1-210ENST00000572787 SPO11Q9Y5K1 396 aa5.53□□□□□ -1.52
TOPBP1-210ENST00000572787 A0A088AWK7 358 aa5.52□□□□□ -1.53
TOPBP1-210ENST00000572787 A0A1W2PPL8 197 aa5.52□□□□□ -1.53
TOPBP1-210ENST00000572787 H0YC42 278 aa5.52□□□□□ -1.53
TOPBP1-210ENST00000572787 PHGDHO43175 533 aaKnown RBP5.52□□□□□ -1.53
TOPBP1-210ENST00000572787 SART1O43290 800 aaKnown RBP5.52□□□□□ -1.53
TOPBP1-210ENST00000572787 GDF9O60383 454 aa5.52□□□□□ -1.53
TOPBP1-210ENST00000572787 KLHL41O60662 606 aa5.52□□□□□ -1.53
TOPBP1-210ENST00000572787 ERAL1O75616 437 aaKnown RBP5.52□□□□□ -1.53
TOPBP1-210ENST00000572787 CHGBP05060 677 aa5.52□□□□□ -1.53
TOPBP1-210ENST00000572787 GSTP1P09211 210 aaKnown RBP5.52□□□□□ -1.53
TOPBP1-210ENST00000572787 SRGAP2CP0DJJ0 459 aa5.52□□□□□ -1.53
TOPBP1-210ENST00000572787 RARBP10826 455 aa5.52□□□□□ -1.53
TOPBP1-210ENST00000572787 ITGA4P13612 1032 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms