RNA–Protein interactions for RNA: ENST00000572579.1

CHD3-214, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 931 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-214ENST00000572579 ZXDAP98168 799 aa20.12■□□□□ 0.81
CHD3-214ENST00000572579 DSC1Q08554 894 aa20.12■□□□□ 0.81
CHD3-214ENST00000572579 NOTUMQ6P988 496 aa20.12■□□□□ 0.81
CHD3-214ENST00000572579 CASP10Q92851 521 aa20.12■□□□□ 0.81
CHD3-214ENST00000572579 NXF3Q9H4D5 531 aaKnown RBP20.12■□□□□ 0.81
CHD3-214ENST00000572579 POMKQ9H5K3 350 aa20.12■□□□□ 0.81
CHD3-214ENST00000572579 POLD4Q9HCU8 107 aa20.12■□□□□ 0.81
CHD3-214ENST00000572579 TUFT1Q9NNX1 390 aa20.12■□□□□ 0.81
CHD3-214ENST00000572579 USP20Q9Y2K6 914 aa20.12■□□□□ 0.81
CHD3-214ENST00000572579 CNTNAP2Q9UHC6 1331 aa20.11■□□□□ 0.81
CHD3-214ENST00000572579 A0A1B0GUA9 196 aa20.11■□□□□ 0.81
CHD3-214ENST00000572579 ERLIN2O94905 339 aa20.11■□□□□ 0.81
CHD3-214ENST00000572579 ALDH2P05091 517 aa20.11■□□□□ 0.81
CHD3-214ENST00000572579 EDN1P05305 212 aa20.11■□□□□ 0.81
CHD3-214ENST00000572579 MLH1P40692 756 aa20.11■□□□□ 0.81
CHD3-214ENST00000572579 PCBP1Q15365 356 aaKnown RBP eCLIP20.11■□□□□ 0.81
CHD3-214ENST00000572579 SAFBQ15424 915 aaKnown RBP eCLIP20.11■□□□□ 0.81
CHD3-214ENST00000572579 TRIM67Q6ZTA4 783 aa20.11■□□□□ 0.81
CHD3-214ENST00000572579 RNF168Q8IYW5 571 aaPredicted RBP20.11■□□□□ 0.81
CHD3-214ENST00000572579 URGCPQ8TCY9 931 aa20.11■□□□□ 0.81
CHD3-214ENST00000572579 KLHL5Q96PQ7 755 aa20.11■□□□□ 0.81
CHD3-214ENST00000572579 TMEM175Q9BSA9 504 aa20.11■□□□□ 0.81
CHD3-214ENST00000572579 CXCL16Q9H2A7 254 aa20.11■□□□□ 0.81
CHD3-214ENST00000572579 KANSL3Q9P2N6 904 aa20.11■□□□□ 0.81
CHD3-214ENST00000572579 DBR1Q9UK59 544 aaKnown RBP20.11■□□□□ 0.81
CHD3-214ENST00000572579 FAN1Q9Y2M0 1017 aa20.11■□□□□ 0.81
CHD3-214ENST00000572579 EIF5BO60841 1220 aaKnown RBP20.1■□□□□ 0.81
CHD3-214ENST00000572579 SSBP05455 408 aaKnown RBP eCLIP20.1■□□□□ 0.81
CHD3-214ENST00000572579 CNPP09543 421 aaKnown RBP20.1■□□□□ 0.81
CHD3-214ENST00000572579 OR52Z1P0C646 297 aa20.1■□□□□ 0.81
CHD3-214ENST00000572579 AKAP5P24588 427 aa20.1■□□□□ 0.81
CHD3-214ENST00000572579 RPA1P27694 616 aa20.1■□□□□ 0.81
CHD3-214ENST00000572579 CA8P35219 290 aa20.1■□□□□ 0.81
CHD3-214ENST00000572579 SCNN1GP51170 649 aa20.1■□□□□ 0.81
CHD3-214ENST00000572579 TFDP1Q14186 410 aa20.1■□□□□ 0.81
CHD3-214ENST00000572579 TTC38Q5R3I4 469 aa20.1■□□□□ 0.81
CHD3-214ENST00000572579 NOSTRINQ8IVI9 506 aa20.1■□□□□ 0.81
CHD3-214ENST00000572579 CCDC51Q96ER9 411 aa20.1■□□□□ 0.81
CHD3-214ENST00000572579 APOL6Q9BWW8 343 aa20.1■□□□□ 0.81
CHD3-214ENST00000572579 FZD8Q9H461 694 aa20.1■□□□□ 0.81
CHD3-214ENST00000572579 PRG3Q9Y2Y8 225 aaPredicted RBP20.1■□□□□ 0.81
CHD3-214ENST00000572579 SRGAP2BP0DMP2 458 aa20.09■□□□□ 0.81
CHD3-214ENST00000572579 IL17AQ16552 155 aa20.09■□□□□ 0.81
CHD3-214ENST00000572579 RARS2Q5T160 578 aaKnown RBP20.09■□□□□ 0.81
CHD3-214ENST00000572579 CDCA2Q69YH5 1023 aaPredicted RBP20.09■□□□□ 0.81
CHD3-214ENST00000572579 PADI6Q6TGC4 694 aa20.09■□□□□ 0.81
CHD3-214ENST00000572579 CNNM3Q8NE01 707 aa20.09■□□□□ 0.81
CHD3-214ENST00000572579 ASIC4Q96FT7 647 aa20.09■□□□□ 0.81
CHD3-214ENST00000572579 ZSCAN31Q96LW9 406 aaPredicted RBP20.09■□□□□ 0.81
CHD3-214ENST00000572579 NACC1Q96RE7 527 aa20.09■□□□□ 0.81
CHD3-214ENST00000572579 CACNG4Q9UBN1 327 aa20.09■□□□□ 0.81
CHD3-214ENST00000572579 TMEM221A6NGB7 291 aa20.08■□□□□ 0.81
CHD3-214ENST00000572579 C2CD4DB7Z1M9 353 aa20.08■□□□□ 0.81
CHD3-214ENST00000572579 M0R296 226 aa20.08■□□□□ 0.81
CHD3-214ENST00000572579 NPTXRO95502 500 aa20.08■□□□□ 0.81
CHD3-214ENST00000572579 CYP11B2P19099 503 aa20.08■□□□□ 0.81
CHD3-214ENST00000572579 U2AF2P26368 475 aaKnown RBP eCLIP20.08■□□□□ 0.81
CHD3-214ENST00000572579 HOXD11P31277 338 aaPredicted RBP20.08■□□□□ 0.81
CHD3-214ENST00000572579 RBM25P49756 843 aaKnown RBP20.08■□□□□ 0.81
CHD3-214ENST00000572579 ITIH3Q06033 890 aa20.08■□□□□ 0.81
CHD3-214ENST00000572579 TPRNQ4KMQ1 711 aa20.08■□□□□ 0.81
CHD3-214ENST00000572579 KIAA0319Q5VV43 1072 aa20.08■□□□□ 0.81
CHD3-214ENST00000572579 PPP4R3CPQ6ZMV5 832 aa20.08■□□□□ 0.81
CHD3-214ENST00000572579 RABGGTAQ92696 567 aa20.08■□□□□ 0.81
CHD3-214ENST00000572579 UBN1Q9NPG3 1134 aa20.08■□□□□ 0.81
CHD3-214ENST00000572579 SH2B1Q9NRF2 756 aaPredicted RBP20.08■□□□□ 0.81
CHD3-214ENST00000572579 KLK14Q9P0G3 267 aa20.08■□□□□ 0.81
CHD3-214ENST00000572579 GIT1Q9Y2X7 761 aa20.08■□□□□ 0.81
CHD3-214ENST00000572579 PCDHB6Q9Y5E3 794 aa20.08■□□□□ 0.81
CHD3-214ENST00000572579 CD2BP2O95400 341 aaKnown RBP20.07■□□□□ 0.8
CHD3-214ENST00000572579 OR1G1P47890 313 aa20.07■□□□□ 0.8
CHD3-214ENST00000572579 CLCN4P51793 760 aa20.07■□□□□ 0.8
CHD3-214ENST00000572579 HMGN5P82970 282 aaKnown RBP20.07■□□□□ 0.8
CHD3-214ENST00000572579 GIT2Q14161 759 aa20.07■□□□□ 0.8
CHD3-214ENST00000572579 IER5LQ5T953 404 aa20.07■□□□□ 0.8
CHD3-214ENST00000572579 BMP8AQ7Z5Y6 402 aa20.07■□□□□ 0.8
CHD3-214ENST00000572579 B3GALT6Q96L58 329 aa20.07■□□□□ 0.8
CHD3-214ENST00000572579 FBXL18Q96ME1 805 aa20.07■□□□□ 0.8
CHD3-214ENST00000572579 FAM193BQ96PV7 902 aaPredicted RBP20.07■□□□□ 0.8
CHD3-214ENST00000572579 CCDC113Q9H0I3 377 aa20.07■□□□□ 0.8
CHD3-214ENST00000572579 SMOC2Q9H3U7 446 aa20.07■□□□□ 0.8
CHD3-214ENST00000572579 ARID2Q68CP9 1835 aa20.06■□□□□ 0.8
CHD3-214ENST00000572579 ZNF318Q5VUA4 2279 aa20.06■□□□□ 0.8
CHD3-214ENST00000572579 LRRIQ4A6NIV6 560 aa20.06■□□□□ 0.8
CHD3-214ENST00000572579 SOD2P04179 222 aa20.06■□□□□ 0.8
CHD3-214ENST00000572579 FXR2P51116 673 aaKnown RBP eCLIP20.06■□□□□ 0.83e-6■□□□□ 8
CHD3-214ENST00000572579 ORC2Q13416 577 aaPredicted RBP20.06■□□□□ 0.8
CHD3-214ENST00000572579 PTPN21Q16825 1174 aa20.06■□□□□ 0.8
CHD3-214ENST00000572579 FAM187BQ17R55 369 aa20.06■□□□□ 0.8
CHD3-214ENST00000572579 SLC27A1Q6PCB7 646 aa20.06■□□□□ 0.8
CHD3-214ENST00000572579 TMC5Q6UXY8 1006 aa20.06■□□□□ 0.8
CHD3-214ENST00000572579 MCPH1Q8NEM0 835 aa20.06■□□□□ 0.8
CHD3-214ENST00000572579 PAAF1Q9BRP4 392 aa20.06■□□□□ 0.8
CHD3-214ENST00000572579 KIFC3Q9BVG8 833 aa20.06■□□□□ 0.8
CHD3-214ENST00000572579 GPR62Q9BZJ7 368 aa20.06■□□□□ 0.8
CHD3-214ENST00000572579 PDZD7Q9H5P4 517 aa20.06■□□□□ 0.8
CHD3-214ENST00000572579 CARNS1A5YM72 827 aa20.05■□□□□ 0.8
CHD3-214ENST00000572579 C2CD2LO14523 706 aa20.05■□□□□ 0.8
CHD3-214ENST00000572579 TEX28O15482 410 aa20.05■□□□□ 0.8
CHD3-214ENST00000572579 IGFBP6P24592 240 aaPredicted RBP20.05■□□□□ 0.8
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