RNA–Protein interactions for RNA: ENST00000572255.5

LITAF-211, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4 BASIC

Gene LITAF, Length 516 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-211ENST00000572255 FAM122AQ96E09 287 aa19.23■□□□□ 0.67
LITAF-211ENST00000572255 NACC1Q96RE7 527 aa19.23■□□□□ 0.67
LITAF-211ENST00000572255 RNF39Q9H2S5 420 aa19.23■□□□□ 0.67
LITAF-211ENST00000572255 HES2Q9Y543 173 aa19.23■□□□□ 0.67
LITAF-211ENST00000572255 TDRD15B5MCY1 1934 aaKnown RBP19.22■□□□□ 0.67
LITAF-211ENST00000572255 LRRIQ4A6NIV6 560 aa19.22■□□□□ 0.67
LITAF-211ENST00000572255 B4GALT5O43286 388 aa19.22■□□□□ 0.67
LITAF-211ENST00000572255 ALDH2P05091 517 aa19.22■□□□□ 0.67
LITAF-211ENST00000572255 RPA1P27694 616 aa19.22■□□□□ 0.67
LITAF-211ENST00000572255 MCPH1Q8NEM0 835 aa19.22■□□□□ 0.67
LITAF-211ENST00000572255 GAD1Q99259 594 aa19.22■□□□□ 0.67
LITAF-211ENST00000572255 NOL7Q9UMY1 257 aaKnown RBP19.22■□□□□ 0.67
LITAF-211ENST00000572255 FAN1Q9Y2M0 1017 aa19.22■□□□□ 0.67
LITAF-211ENST00000572255 ARL5CA6NH57 179 aa19.21■□□□□ 0.67
LITAF-211ENST00000572255 NRP1O14786 923 aa19.21■□□□□ 0.67
LITAF-211ENST00000572255 INPPL1O15357 1258 aa19.21■□□□□ 0.67
LITAF-211ENST00000572255 TECTAO75443 2155 aa19.21■□□□□ 0.67
LITAF-211ENST00000572255 MLH1P40692 756 aa19.21■□□□□ 0.67
LITAF-211ENST00000572255 TRAPPC10P48553 1259 aa19.21■□□□□ 0.67
LITAF-211ENST00000572255 PTPN14Q15678 1187 aa19.21■□□□□ 0.67
LITAF-211ENST00000572255 EDAQ92838 391 aa19.21■□□□□ 0.67
LITAF-211ENST00000572255 APOL6Q9BWW8 343 aa19.21■□□□□ 0.67
LITAF-211ENST00000572255 TRIM6Q9C030 488 aaPredicted RBP19.21■□□□□ 0.67
LITAF-211ENST00000572255 NXF3Q9H4D5 531 aaKnown RBP19.21■□□□□ 0.67
LITAF-211ENST00000572255 STK39Q9UEW8 545 aa19.21■□□□□ 0.67
LITAF-211ENST00000572255 CDH22Q9UJ99 828 aa19.21■□□□□ 0.67
LITAF-211ENST00000572255 MUC6Q6W4X9 2439 aa19.2■□□□□ 0.66
LITAF-211ENST00000572255 ARHGEF35A5YM69 484 aa19.2■□□□□ 0.66
LITAF-211ENST00000572255 EPCAMP16422 314 aa19.2■□□□□ 0.66
LITAF-211ENST00000572255 SCNN1GP51170 649 aa19.2■□□□□ 0.66
LITAF-211ENST00000572255 ITIH3Q06033 890 aa19.2■□□□□ 0.66
LITAF-211ENST00000572255 NBR1Q14596 966 aa19.2■□□□□ 0.66
LITAF-211ENST00000572255 CES5AQ6NT32 575 aa19.2■□□□□ 0.66
LITAF-211ENST00000572255 SLC27A1Q6PCB7 646 aa19.2■□□□□ 0.66
LITAF-211ENST00000572255 CDR2LQ86X02 465 aaPredicted RBP19.2■□□□□ 0.66
LITAF-211ENST00000572255 COLGALT2Q8IYK4 626 aa19.2■□□□□ 0.66
LITAF-211ENST00000572255 HACE1Q8IYU2 909 aa19.2■□□□□ 0.66
LITAF-211ENST00000572255 C4orf32Q8N8J7 132 aa19.2■□□□□ 0.66
LITAF-211ENST00000572255 SLC22A17Q8WUG5 538 aa19.2■□□□□ 0.66
LITAF-211ENST00000572255 ZFP42Q96MM3 310 aa19.2■□□□□ 0.66
LITAF-211ENST00000572255 ADAM7Q9H2U9 754 aa19.2■□□□□ 0.66
LITAF-211ENST00000572255 DZANK1Q9NVP4 752 aa19.2■□□□□ 0.66
LITAF-211ENST00000572255 GIT1Q9Y2X7 761 aa19.2■□□□□ 0.66
LITAF-211ENST00000572255 PRG3Q9Y2Y8 225 aaPredicted RBP19.2■□□□□ 0.66
LITAF-211ENST00000572255 NPTXRO95502 500 aa19.19■□□□□ 0.66
LITAF-211ENST00000572255 SSBP05455 408 aaKnown RBP eCLIP19.19■□□□□ 0.66
LITAF-211ENST00000572255 U2AF2P26368 475 aaKnown RBP eCLIP19.19■□□□□ 0.66
LITAF-211ENST00000572255 OR1G1P47890 313 aa19.19■□□□□ 0.66
LITAF-211ENST00000572255 FXR2P51116 673 aaKnown RBP eCLIP19.19■□□□□ 0.66
LITAF-211ENST00000572255 DSC1Q08554 894 aa19.19■□□□□ 0.66
LITAF-211ENST00000572255 RARS2Q5T160 578 aaKnown RBP19.19■□□□□ 0.66
LITAF-211ENST00000572255 CDCA2Q69YH5 1023 aaPredicted RBP19.19■□□□□ 0.66
LITAF-211ENST00000572255 PADI6Q6TGC4 694 aa19.19■□□□□ 0.66
LITAF-211ENST00000572255 PPP4R3CPQ6ZMV5 832 aa19.19■□□□□ 0.66
LITAF-211ENST00000572255 HFE2Q6ZVN8 426 aa19.19■□□□□ 0.66
LITAF-211ENST00000572255 ZBTB8OSQ8IWT0 167 aa19.19■□□□□ 0.66
LITAF-211ENST00000572255 C12orf76Q8N812 135 aaPredicted RBP19.19■□□□□ 0.66
LITAF-211ENST00000572255 PRMT7Q9NVM4 692 aaPredicted RBP19.19■□□□□ 0.66
LITAF-211ENST00000572255 MARCH5Q9NX47 278 aa19.19■□□□□ 0.66
LITAF-211ENST00000572255 MIOSQ9NXC5 875 aa19.19■□□□□ 0.66
LITAF-211ENST00000572255 A0A1B0GUA9 196 aa19.18■□□□□ 0.66
LITAF-211ENST00000572255 CYP11B2P19099 503 aa19.18■□□□□ 0.66
LITAF-211ENST00000572255 MUTP22033 750 aa19.18■□□□□ 0.66
LITAF-211ENST00000572255 SP100P23497 879 aaPredicted RBP19.18■□□□□ 0.66
LITAF-211ENST00000572255 AKAP5P24588 427 aa19.18■□□□□ 0.66
LITAF-211ENST00000572255 CCT6AP40227 531 aaKnown RBP19.18■□□□□ 0.66
LITAF-211ENST00000572255 ZXDAP98168 799 aa19.18■□□□□ 0.66
LITAF-211ENST00000572255 RABEP1Q15276 862 aa19.18■□□□□ 0.66
LITAF-211ENST00000572255 HAUS3Q68CZ6 603 aa19.18■□□□□ 0.66
LITAF-211ENST00000572255 PPFIBP1Q86W92 1011 aa19.18■□□□□ 0.66
LITAF-211ENST00000572255 BSNDQ8WZ55 320 aa19.18■□□□□ 0.66
LITAF-211ENST00000572255 PRIMPOLQ96LW4 560 aa19.18■□□□□ 0.66
LITAF-211ENST00000572255 NECTIN4Q96NY8 510 aa19.18■□□□□ 0.66
LITAF-211ENST00000572255 EMILIN2Q9BXX0 1053 aa19.18■□□□□ 0.66
LITAF-211ENST00000572255 POMKQ9H5K3 350 aa19.18■□□□□ 0.66
LITAF-211ENST00000572255 LILRB3O75022 631 aa19.17■□□□□ 0.66
LITAF-211ENST00000572255 CNPP09543 421 aaKnown RBP19.17■□□□□ 0.66
LITAF-211ENST00000572255 WEE2P0C1S8 567 aa19.17■□□□□ 0.66
LITAF-211ENST00000572255 MTHFRP42898 656 aa19.17■□□□□ 0.66
LITAF-211ENST00000572255 TOB1P50616 345 aaPredicted RBP19.17■□□□□ 0.66
LITAF-211ENST00000572255 ECM1Q16610 540 aa19.17■□□□□ 0.66
LITAF-211ENST00000572255 FAM187BQ17R55 369 aa19.17■□□□□ 0.66
LITAF-211ENST00000572255 KANK3Q6NY19 840 aa19.17■□□□□ 0.66
LITAF-211ENST00000572255 TRIM67Q6ZTA4 783 aa19.17■□□□□ 0.66
LITAF-211ENST00000572255 RIPOR3Q96MK2 946 aa19.17■□□□□ 0.66
LITAF-211ENST00000572255 KLHL5Q96PQ7 755 aa19.17■□□□□ 0.66
LITAF-211ENST00000572255 HERC2P3Q9BVR0 1158 aa19.17■□□□□ 0.66
LITAF-211ENST00000572255 C2orf40Q9H1Z8 148 aa19.17■□□□□ 0.66
LITAF-211ENST00000572255 FZD8Q9H461 694 aa19.17■□□□□ 0.66
LITAF-211ENST00000572255 TSHZ2Q9NRE2 1034 aa19.17■□□□□ 0.66
LITAF-211ENST00000572255 MRPL17Q9NRX2 175 aaKnown RBP19.17■□□□□ 0.66
LITAF-211ENST00000572255 LRWD1Q9UFC0 647 aa19.17■□□□□ 0.66
LITAF-211ENST00000572255 NR2E1Q9Y466 385 aa19.17■□□□□ 0.66
LITAF-211ENST00000572255 ZNF318Q5VUA4 2279 aa19.17■□□□□ 0.66
LITAF-211ENST00000572255 ZMYM2Q9UBW7 1377 aa19.17■□□□□ 0.66
LITAF-211ENST00000572255 SOD2P04179 222 aa19.16■□□□□ 0.66
LITAF-211ENST00000572255 URODP06132 367 aa19.16■□□□□ 0.66
LITAF-211ENST00000572255 KLRC2P26717 231 aa19.16■□□□□ 0.66
LITAF-211ENST00000572255 PTGDRQ13258 359 aa19.16■□□□□ 0.66
LITAF-211ENST00000572255 KIAA1841Q6NSI8 718 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms