RNA–Protein interactions for RNA: ENST00000571249.1

CHD3-213, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-213ENST00000571249 GNAT2P19087 354 aa7.96□□□□□ -1.14
CHD3-213ENST00000571249 CCND2P30279 289 aa7.96□□□□□ -1.14
CHD3-213ENST00000571249 SEMA3FQ13275 785 aa7.96□□□□□ -1.14
CHD3-213ENST00000571249 MTSS1LQ765P7 747 aa7.96□□□□□ -1.14
CHD3-213ENST00000571249 SND1Q7KZF4 910 aaKnown RBP eCLIP7.96□□□□□ -1.14
CHD3-213ENST00000571249 TAS1R1Q7RTX1 841 aa7.96□□□□□ -1.14
CHD3-213ENST00000571249 PIP4P1Q86T03 277 aa7.96□□□□□ -1.14
CHD3-213ENST00000571249 PALB2Q86YC2 1186 aa7.96□□□□□ -1.14
CHD3-213ENST00000571249 PLEKHM2Q8IWE5 1019 aa7.96□□□□□ -1.14
CHD3-213ENST00000571249 TRMT2AQ8IZ69 625 aaKnown RBP7.96□□□□□ -1.14
CHD3-213ENST00000571249 CLASRPQ8N2M8 674 aaKnown RBP7.96□□□□□ -1.14
CHD3-213ENST00000571249 FAM3CQ92520 227 aa7.96□□□□□ -1.14
CHD3-213ENST00000571249 ZC3H10Q96K80 434 aaKnown RBP7.96□□□□□ -1.14
CHD3-213ENST00000571249 DCBLD2Q96PD2 775 aa7.96□□□□□ -1.14
CHD3-213ENST00000571249 PPP1R16BQ96T49 567 aa7.96□□□□□ -1.14
CHD3-213ENST00000571249 IER2Q9BTL4 223 aa7.96□□□□□ -1.14
CHD3-213ENST00000571249 PRKD2Q9BZL6 878 aa7.96□□□□□ -1.14
CHD3-213ENST00000571249 SEMA4CQ9C0C4 833 aa7.96□□□□□ -1.14
CHD3-213ENST00000571249 DUSP15Q9H1R2 295 aaPredicted RBP7.96□□□□□ -1.14
CHD3-213ENST00000571249 DDX52Q9Y2R4 599 aaKnown RBP eCLIP7.96□□□□□ -1.14
CHD3-213ENST00000571249 PCDHA1Q9Y5I3 950 aa7.96□□□□□ -1.14
CHD3-213ENST00000571249 ABCA7Q8IZY2 2146 aa7.96□□□□□ -1.14
CHD3-213ENST00000571249 DOCK5Q9H7D0 1870 aa7.96□□□□□ -1.14
CHD3-213ENST00000571249 CENPEQ02224 2701 aa7.95□□□□□ -1.14
CHD3-213ENST00000571249 BCLAF3A2AJT9 711 aaKnown RBP7.95□□□□□ -1.14
CHD3-213ENST00000571249 RRN3P2A6NIE6 340 aa7.95□□□□□ -1.14
CHD3-213ENST00000571249 ENO4A6NNW6 628 aa7.95□□□□□ -1.14
CHD3-213ENST00000571249 SPATA31C2B4DYI2 1134 aa7.95□□□□□ -1.14
CHD3-213ENST00000571249 MAN2B1O00754 1011 aa7.95□□□□□ -1.14
CHD3-213ENST00000571249 CAPN9O14815 690 aa7.95□□□□□ -1.14
CHD3-213ENST00000571249 EXTL3O43909 919 aa7.95□□□□□ -1.14
CHD3-213ENST00000571249 GLUD1P00367 558 aa7.95□□□□□ -1.14
CHD3-213ENST00000571249 TRIM27P14373 513 aa7.95□□□□□ -1.14
CHD3-213ENST00000571249 TCF7P36402 384 aaPredicted RBP7.95□□□□□ -1.14
CHD3-213ENST00000571249 ABCG1P45844 678 aa7.95□□□□□ -1.14
CHD3-213ENST00000571249 HSD17B4P51659 736 aa7.95□□□□□ -1.14
CHD3-213ENST00000571249 AK2P54819 239 aa7.95□□□□□ -1.14
CHD3-213ENST00000571249 CTDSPL2Q05D32 466 aa7.95□□□□□ -1.14
CHD3-213ENST00000571249 GRM2Q14416 872 aa7.95□□□□□ -1.14
CHD3-213ENST00000571249 FAM43BQ6ZT52 329 aaPredicted RBP7.95□□□□□ -1.14
CHD3-213ENST00000571249 STOX1Q6ZVD7 989 aa7.95□□□□□ -1.14
CHD3-213ENST00000571249 FAM228AQ86W67 206 aa7.95□□□□□ -1.14
CHD3-213ENST00000571249 ECHDC2Q86YB7 292 aa7.95□□□□□ -1.14
CHD3-213ENST00000571249 NACAP1Q9BZK3 213 aa7.95□□□□□ -1.14
CHD3-213ENST00000571249 NPDC1Q9NQX5 325 aaPredicted RBP7.95□□□□□ -1.14
CHD3-213ENST00000571249 POLR3BQ9NW08 1133 aaPredicted RBP7.95□□□□□ -1.14
CHD3-213ENST00000571249 ERAP1Q9NZ08 941 aa7.95□□□□□ -1.14
CHD3-213ENST00000571249 DNAJB4Q9UDY4 337 aa7.95□□□□□ -1.14
CHD3-213ENST00000571249 PCDHA2Q9Y5H9 948 aa7.95□□□□□ -1.14
CHD3-213ENST00000571249 ZFP37Q9Y6Q3 630 aaPredicted RBP7.95□□□□□ -1.14
CHD3-213ENST00000571249 KDM3AQ9Y4C1 1321 aa7.95□□□□□ -1.14
CHD3-213ENST00000571249 ZMYM2Q9UBW7 1377 aa7.95□□□□□ -1.14
CHD3-213ENST00000571249 CSMD1Q96PZ7 3565 aa7.94□□□□□ -1.14
CHD3-213ENST00000571249 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.94□□□□□ -1.14
CHD3-213ENST00000571249 M0R2C6 588 aa7.94□□□□□ -1.14
CHD3-213ENST00000571249 OPLAHO14841 1288 aa7.94□□□□□ -1.14
CHD3-213ENST00000571249 KHNYNO15037 678 aaKnown RBP7.94□□□□□ -1.14
CHD3-213ENST00000571249 GPR182O15218 404 aa7.94□□□□□ -1.14
CHD3-213ENST00000571249 GAS2O43903 313 aaKnown RBP7.94□□□□□ -1.14
CHD3-213ENST00000571249 MAFO75444 373 aaPredicted RBP7.94□□□□□ -1.14
CHD3-213ENST00000571249 PAPLNO95428 1278 aa7.94□□□□□ -1.14
CHD3-213ENST00000571249 CCNE1P24864 410 aa7.94□□□□□ -1.14
CHD3-213ENST00000571249 HOXA6P31267 233 aa7.94□□□□□ -1.14
CHD3-213ENST00000571249 HOXA13P31271 388 aaPredicted RBP7.94□□□□□ -1.14
CHD3-213ENST00000571249 MAPK8P45983 427 aa7.94□□□□□ -1.14
CHD3-213ENST00000571249 PLCB4Q15147 1175 aa7.94□□□□□ -1.14
CHD3-213ENST00000571249 QRICH1Q2TAL8 776 aa7.94□□□□□ -1.14
CHD3-213ENST00000571249 GNPTABQ3T906 1256 aa7.94□□□□□ -1.14
CHD3-213ENST00000571249 LONRF3Q496Y0 759 aa7.94□□□□□ -1.14
CHD3-213ENST00000571249 ODR4Q5SWX8 454 aa7.94□□□□□ -1.14
CHD3-213ENST00000571249 TANGO2Q6ICL3 276 aa7.94□□□□□ -1.14
CHD3-213ENST00000571249 NME8Q8N427 588 aa7.94□□□□□ -1.14
CHD3-213ENST00000571249 TMEM57Q8N5G2 664 aa7.94□□□□□ -1.14
CHD3-213ENST00000571249 ING5Q8WYH8 240 aa7.94□□□□□ -1.14
CHD3-213ENST00000571249 APPBP2Q92624 585 aa7.94□□□□□ -1.14
CHD3-213ENST00000571249 PHF12Q96QT6 1004 aa7.94□□□□□ -1.14
CHD3-213ENST00000571249 NAPBQ9H115 298 aa7.94□□□□□ -1.14
CHD3-213ENST00000571249 NRDE2Q9H7Z3 1164 aa7.94□□□□□ -1.14
CHD3-213ENST00000571249 MRPL17Q9NRX2 175 aaKnown RBP7.94□□□□□ -1.14
CHD3-213ENST00000571249 TCP11L1Q9NUJ3 509 aa7.94□□□□□ -1.14
CHD3-213ENST00000571249 RTEL1Q9NZ71 1219 aa7.94□□□□□ -1.14
CHD3-213ENST00000571249 DNMT3LQ9UJW3 386 aa7.94□□□□□ -1.14
CHD3-213ENST00000571249 ATG2BQ96BY7 2078 aa7.93□□□□□ -1.14
CHD3-213ENST00000571249 GSTTP1A0A1W2PQM5 241 aa7.93□□□□□ -1.14
CHD3-213ENST00000571249 B8ZZF3 427 aa7.93□□□□□ -1.14
CHD3-213ENST00000571249 IPO8O15397 1037 aaKnown RBP7.93□□□□□ -1.14
CHD3-213ENST00000571249 TGM5O43548 720 aa7.93□□□□□ -1.14
CHD3-213ENST00000571249 SNHG28P0DPA3 235 aa7.93□□□□□ -1.14
CHD3-213ENST00000571249 RDXP35241 583 aaKnown RBP7.93□□□□□ -1.14
CHD3-213ENST00000571249 SLC11A1P49279 550 aa7.93□□□□□ -1.14
CHD3-213ENST00000571249 CSRP3P50461 194 aa7.93□□□□□ -1.14
CHD3-213ENST00000571249 RIPPLY3P57055 190 aa7.93□□□□□ -1.14
CHD3-213ENST00000571249 PKN3Q6P5Z2 889 aa7.93□□□□□ -1.14
CHD3-213ENST00000571249 GLYCTKQ8IVS8 523 aa7.93□□□□□ -1.14
CHD3-213ENST00000571249 SCUBE3Q8IX30 993 aa7.93□□□□□ -1.14
CHD3-213ENST00000571249 ADGRF4Q8IZF3 695 aa7.93□□□□□ -1.14
CHD3-213ENST00000571249 FRAT1Q92837 279 aaPredicted RBP7.93□□□□□ -1.14
CHD3-213ENST00000571249 TRIM4Q9C037 500 aa7.93□□□□□ -1.14
CHD3-213ENST00000571249 GBP3Q9H0R5 595 aa7.93□□□□□ -1.14
CHD3-213ENST00000571249 VAT1LQ9HCJ6 419 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms