RNA–Protein interactions for RNA: ENST00000569454.1

CDH13-213, Transcript of cadherin 13, humanhuman

TSL 3

Gene CDH13, Length 877 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-213ENST00000569454 SRGAP2O75044 1071 aa6.2□□□□□ -1.42
CDH13-213ENST00000569454 SASH3O75995 380 aa6.2□□□□□ -1.42
CDH13-213ENST00000569454 KIF4AO95239 1232 aa6.2□□□□□ -1.42
CDH13-213ENST00000569454 EGFRP00533 1210 aa6.2□□□□□ -1.42
CDH13-213ENST00000569454 ACTN1P12814 892 aa6.2□□□□□ -1.42
CDH13-213ENST00000569454 KCNA2P16389 499 aa6.2□□□□□ -1.42
CDH13-213ENST00000569454 KLRC1P26715 233 aa6.2□□□□□ -1.42
CDH13-213ENST00000569454 RFC5P40937 340 aa6.2□□□□□ -1.42
CDH13-213ENST00000569454 HMGCS2P54868 508 aa6.2□□□□□ -1.42
CDH13-213ENST00000569454 MFAP3P55082 362 aa6.2□□□□□ -1.42
CDH13-213ENST00000569454 PEX3P56589 373 aa6.2□□□□□ -1.42
CDH13-213ENST00000569454 KCNA1Q09470 495 aa6.2□□□□□ -1.42
CDH13-213ENST00000569454 PAK2Q13177 524 aa6.2□□□□□ -1.42
CDH13-213ENST00000569454 DRAP1Q14919 205 aaPredicted RBP6.2□□□□□ -1.42
CDH13-213ENST00000569454 STXBP2Q15833 593 aa6.2□□□□□ -1.42
CDH13-213ENST00000569454 CBWD6Q4V339 395 aa6.2□□□□□ -1.42
CDH13-213ENST00000569454 EPC2Q52LR7 807 aa6.2□□□□□ -1.42
CDH13-213ENST00000569454 CBWD3Q5JTY5 395 aa6.2□□□□□ -1.42
CDH13-213ENST00000569454 CBWD5Q5RIA9 395 aa6.2□□□□□ -1.42
CDH13-213ENST00000569454 KRT39Q6A163 491 aa6.2□□□□□ -1.42
CDH13-213ENST00000569454 C11orf63Q6NUN7 778 aa6.2□□□□□ -1.42
CDH13-213ENST00000569454 NFRKBQ6P4R8 1299 aa6.2□□□□□ -1.42
CDH13-213ENST00000569454 LBX2Q6XYB7 198 aa6.2□□□□□ -1.42
CDH13-213ENST00000569454 SAMD7Q7Z3H4 446 aa6.2□□□□□ -1.42
CDH13-213ENST00000569454 PEX26Q7Z412 305 aa6.2□□□□□ -1.42
CDH13-213ENST00000569454 SLFN11Q7Z7L1 901 aa6.2□□□□□ -1.42
CDH13-213ENST00000569454 IFT20Q8IY31 132 aa6.2□□□□□ -1.42
CDH13-213ENST00000569454 LRRC57Q8N9N7 239 aa6.2□□□□□ -1.42
CDH13-213ENST00000569454 PROCA1Q8NCQ7 364 aaPredicted RBP6.2□□□□□ -1.42
CDH13-213ENST00000569454 TMEM161BQ8NDZ6 487 aa6.2□□□□□ -1.42
CDH13-213ENST00000569454 NLGN2Q8NFZ4 835 aa6.2□□□□□ -1.42
CDH13-213ENST00000569454 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.2□□□□□ -1.42
CDH13-213ENST00000569454 TPCN2Q8NHX9 752 aa6.2□□□□□ -1.42
CDH13-213ENST00000569454 SLC30A5Q8TAD4 765 aa6.2□□□□□ -1.42
CDH13-213ENST00000569454 ACTRT1Q8TDG2 376 aa6.2□□□□□ -1.42
CDH13-213ENST00000569454 CAVIN3Q969G5 261 aa6.2□□□□□ -1.42
CDH13-213ENST00000569454 EXOC4Q96A65 974 aa6.2□□□□□ -1.42
CDH13-213ENST00000569454 FAM167AQ96KS9 214 aa6.2□□□□□ -1.42
CDH13-213ENST00000569454 CEP170P1Q96L14 293 aa6.2□□□□□ -1.42
CDH13-213ENST00000569454 FBXL18Q96ME1 805 aa6.2□□□□□ -1.42
CDH13-213ENST00000569454 SYT11Q9BT88 431 aa6.2□□□□□ -1.42
CDH13-213ENST00000569454 TMEM8AQ9HCN3 771 aa6.2□□□□□ -1.42
CDH13-213ENST00000569454 ABCB6Q9NP58 842 aa6.2□□□□□ -1.42
CDH13-213ENST00000569454 KMT5AQ9NQR1 393 aa6.2□□□□□ -1.42
CDH13-213ENST00000569454 CYP39A1Q9NYL5 469 aa6.2□□□□□ -1.42
CDH13-213ENST00000569454 PKD2L1Q9P0L9 805 aa6.2□□□□□ -1.42
CDH13-213ENST00000569454 TBX20Q9UMR3 447 aa6.2□□□□□ -1.42
CDH13-213ENST00000569454 COQ4Q9Y3A0 265 aa6.2□□□□□ -1.42
CDH13-213ENST00000569454 AFG3L2Q9Y4W6 797 aa6.2□□□□□ -1.42
CDH13-213ENST00000569454 CSADQ9Y600 493 aa6.2□□□□□ -1.42
CDH13-213ENST00000569454 EMSYQ7Z589 1322 aa6.2□□□□□ -1.42
CDH13-213ENST00000569454 ZNF541Q9H0D2 1346 aa6.2□□□□□ -1.42
CDH13-213ENST00000569454 MYH11P35749 1972 aa6.19□□□□□ -1.42
CDH13-213ENST00000569454 GOLGA6L10A0A0M3HER8 536 aa6.19□□□□□ -1.42
CDH13-213ENST00000569454 DENND3A2RUS2 1198 aa6.19□□□□□ -1.42
CDH13-213ENST00000569454 SPDYE16A6NNV3 312 aaPredicted RBP6.19□□□□□ -1.42
CDH13-213ENST00000569454 A6NNZ2 444 aa6.19□□□□□ -1.42
CDH13-213ENST00000569454 PDE2AO00408 941 aaPredicted RBP6.19□□□□□ -1.42
CDH13-213ENST00000569454 DDX3XO00571 662 aaKnown RBP eCLIP6.19□□□□□ -1.42
CDH13-213ENST00000569454 HNRNPDLO14979 420 aaKnown RBP6.19□□□□□ -1.42
CDH13-213ENST00000569454 BUB1O43683 1085 aa6.19□□□□□ -1.42
CDH13-213ENST00000569454 MTA2O94776 668 aa6.19□□□□□ -1.42
CDH13-213ENST00000569454 SLC25A27O95847 323 aa6.19□□□□□ -1.42
CDH13-213ENST00000569454 CCNE2O96020 404 aa6.19□□□□□ -1.42
CDH13-213ENST00000569454 LDHAP00338 332 aaKnown RBP6.19□□□□□ -1.42
CDH13-213ENST00000569454 PIGRP01833 764 aa6.19□□□□□ -1.42
CDH13-213ENST00000569454 SUPT20HL2P0C7V6 817 aa6.19□□□□□ -1.42
CDH13-213ENST00000569454 TRIM49P0CI25 452 aa6.19□□□□□ -1.42
CDH13-213ENST00000569454 TRIM49CP0CI26 452 aa6.19□□□□□ -1.42
CDH13-213ENST00000569454 TGFB3P10600 412 aa6.19□□□□□ -1.42
CDH13-213ENST00000569454 GZMAP12544 262 aa6.19□□□□□ -1.42
CDH13-213ENST00000569454 TNFAIP3P21580 790 aa6.19□□□□□ -1.42
CDH13-213ENST00000569454 GBP1P32455 592 aa6.19□□□□□ -1.42
CDH13-213ENST00000569454 NF2P35240 595 aa6.19□□□□□ -1.42
CDH13-213ENST00000569454 NAMPTP43490 491 aa6.19□□□□□ -1.42
CDH13-213ENST00000569454 TNNT3P45378 269 aaPredicted RBP6.19□□□□□ -1.42
CDH13-213ENST00000569454 NOP2P46087 812 aaKnown RBP6.19□□□□□ -1.42
CDH13-213ENST00000569454 NPTX2P47972 431 aa6.19□□□□□ -1.42
CDH13-213ENST00000569454 GPC3P51654 580 aa6.19□□□□□ -1.42
CDH13-213ENST00000569454 ACTR2P61160 394 aa6.19□□□□□ -1.42
CDH13-213ENST00000569454 PRKCEQ02156 737 aa6.19□□□□□ -1.42
CDH13-213ENST00000569454 C2orf54Q08AI8 447 aa6.19□□□□□ -1.42
CDH13-213ENST00000569454 STRN3Q13033 797 aa6.19□□□□□ -1.42
CDH13-213ENST00000569454 CUL1Q13616 776 aa6.19□□□□□ -1.42
CDH13-213ENST00000569454 NEDD9Q14511 834 aa6.19□□□□□ -1.42
CDH13-213ENST00000569454 TMEM132BQ14DG7 1078 aa6.19□□□□□ -1.42
CDH13-213ENST00000569454 SNRNP35Q16560 246 aaKnown RBP6.19□□□□□ -1.42
CDH13-213ENST00000569454 TUBB8Q3ZCM7 444 aa6.19□□□□□ -1.42
CDH13-213ENST00000569454 FAM102BQ5T8I3 360 aa6.19□□□□□ -1.42
CDH13-213ENST00000569454 TAF3Q5VWG9 929 aa6.19□□□□□ -1.42
CDH13-213ENST00000569454 FAM160B1Q5W0V3 765 aa6.19□□□□□ -1.42
CDH13-213ENST00000569454 SLFN12LQ6IEE8 588 aa6.19□□□□□ -1.42
CDH13-213ENST00000569454 KCNV1Q6PIU1 500 aa6.19□□□□□ -1.42
CDH13-213ENST00000569454 CCNI2Q6ZMN8 369 aaPredicted RBP6.19□□□□□ -1.42
CDH13-213ENST00000569454 ANO5Q75V66 913 aa6.19□□□□□ -1.42
CDH13-213ENST00000569454 RIOX2Q8IUF8 465 aa6.19□□□□□ -1.42
CDH13-213ENST00000569454 GPD1LQ8N335 351 aa6.19□□□□□ -1.42
CDH13-213ENST00000569454 ANKRD13CQ8N6S4 541 aa6.19□□□□□ -1.42
CDH13-213ENST00000569454 USP38Q8NB14 1042 aa6.19□□□□□ -1.42
CDH13-213ENST00000569454 FBXL13Q8NEE6 735 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms