RNA–Protein interactions for RNA: ENST00000569225.5

CHD9-219, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 1,862 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-219ENST00000569225 RSPH1Q8WYR4 309 aa10□□□□□ -0.81
CHD9-219ENST00000569225 CPB2Q96IY4 423 aa10□□□□□ -0.81
CHD9-219ENST00000569225 GSDMAQ96QA5 445 aa10□□□□□ -0.81
CHD9-219ENST00000569225 ACO2Q99798 780 aaKnown RBP10□□□□□ -0.81
CHD9-219ENST00000569225 TCHPQ9BT92 498 aa10□□□□□ -0.81
CHD9-219ENST00000569225 PDZD7Q9H5P4 517 aa10□□□□□ -0.81
CHD9-219ENST00000569225 ELAC1Q9H777 363 aaKnown RBP10□□□□□ -0.81
CHD9-219ENST00000569225 FAM105AQ9NUU6 356 aa10□□□□□ -0.81
CHD9-219ENST00000569225 TMEM161AQ9NX61 479 aa10□□□□□ -0.81
CHD9-219ENST00000569225 COLQQ9Y215 455 aaPredicted RBP10□□□□□ -0.81
CHD9-219ENST00000569225 PCDHB2Q9Y5E7 798 aa10□□□□□ -0.81
CHD9-219ENST00000569225 HSFX4A0A1B0GTS1 333 aaPredicted RBP10□□□□□ -0.81
CHD9-219ENST00000569225 HSFX3A0A1B0GWH4 333 aaPredicted RBP10□□□□□ -0.81
CHD9-219ENST00000569225 KLRC4O43908 158 aa10□□□□□ -0.81
CHD9-219ENST00000569225 ZNF623O75123 536 aa10□□□□□ -0.81
CHD9-219ENST00000569225 TOM1L1O75674 476 aa10□□□□□ -0.81
CHD9-219ENST00000569225 PPP1R37O75864 691 aa10□□□□□ -0.81
CHD9-219ENST00000569225 RHOBTB3O94955 611 aa10□□□□□ -0.81
CHD9-219ENST00000569225 EOMESO95936 686 aa10□□□□□ -0.81
CHD9-219ENST00000569225 PIGRP01833 764 aa10□□□□□ -0.81
CHD9-219ENST00000569225 IBSPP21815 317 aaPredicted RBP10□□□□□ -0.81
CHD9-219ENST00000569225 DEFB103AP81534 67 aa10□□□□□ -0.81
CHD9-219ENST00000569225 EHHADHQ08426 723 aa10□□□□□ -0.81
CHD9-219ENST00000569225 ZC2HC1CQ53FD0 456 aaPredicted RBP10□□□□□ -0.81
CHD9-219ENST00000569225 NT5DC1Q5TFE4 455 aa10□□□□□ -0.81
CHD9-219ENST00000569225 TAS1R3Q7RTX0 852 aa10□□□□□ -0.81
CHD9-219ENST00000569225 ECHDC2Q86YB7 292 aa10□□□□□ -0.81
CHD9-219ENST00000569225 HERC6Q8IVU3 1022 aa10□□□□□ -0.81
CHD9-219ENST00000569225 RNF169Q8NCN4 708 aa10□□□□□ -0.81
CHD9-219ENST00000569225 TOP1MTQ969P6 601 aa10□□□□□ -0.81
CHD9-219ENST00000569225 TARS2Q9BW92 718 aaKnown RBP10□□□□□ -0.81
CHD9-219ENST00000569225 CLSTN2Q9H4D0 955 aa10□□□□□ -0.81
CHD9-219ENST00000569225 UBN1Q9NPG3 1134 aa10□□□□□ -0.81
CHD9-219ENST00000569225 CLDN3O15551 220 aa9.99□□□□□ -0.81
CHD9-219ENST00000569225 UPP2O95045 317 aa9.99□□□□□ -0.81
CHD9-219ENST00000569225 GJB5O95377 273 aa9.99□□□□□ -0.81
CHD9-219ENST00000569225 NPTXRO95502 500 aa9.99□□□□□ -0.81
CHD9-219ENST00000569225 MYBP10242 640 aa9.99□□□□□ -0.81
CHD9-219ENST00000569225 MCF2P10911 925 aa9.99□□□□□ -0.81
CHD9-219ENST00000569225 MATR3P43243 847 aaKnown RBP eCLIP9.99□□□□□ -0.81
CHD9-219ENST00000569225 RAB30Q15771 203 aa9.99□□□□□ -0.81
CHD9-219ENST00000569225 KYAT1Q16773 422 aa9.99□□□□□ -0.81
CHD9-219ENST00000569225 ZNF568Q3ZCX4 644 aa9.99□□□□□ -0.81
CHD9-219ENST00000569225 UBXN11Q5T124 520 aa9.99□□□□□ -0.81
CHD9-219ENST00000569225 SLFN12LQ6IEE8 588 aa9.99□□□□□ -0.81
CHD9-219ENST00000569225 MPZL3Q6UWV2 235 aa9.99□□□□□ -0.81
CHD9-219ENST00000569225 ABI1Q8IZP0 508 aa9.99□□□□□ -0.81
CHD9-219ENST00000569225 HPS3Q969F9 1004 aa9.99□□□□□ -0.81
CHD9-219ENST00000569225 STRA6Q9BX79 667 aa9.99□□□□□ -0.81
CHD9-219ENST00000569225 NUP62CLQ9H1M0 184 aa9.99□□□□□ -0.81
CHD9-219ENST00000569225 SLC39A2Q9NP94 309 aa9.99□□□□□ -0.81
CHD9-219ENST00000569225 ANKFY1Q9P2R3 1169 aa9.99□□□□□ -0.81
CHD9-219ENST00000569225 EVPLQ92817 2033 aa9.99□□□□□ -0.81
CHD9-219ENST00000569225 TCHHQ07283 1943 aa9.99□□□□□ -0.81
CHD9-219ENST00000569225 ITGA4P13612 1032 aa9.98□□□□□ -0.81
CHD9-219ENST00000569225 CASP5P51878 434 aa9.98□□□□□ -0.81
CHD9-219ENST00000569225 SNRPFP62306 86 aaKnown RBP9.98□□□□□ -0.81
CHD9-219ENST00000569225 HSP90AA2PQ14568 343 aaPredicted RBP9.98□□□□□ -0.81
CHD9-219ENST00000569225 NOLC1Q14978 699 aaKnown RBP eCLIP9.98□□□□□ -0.81
CHD9-219ENST00000569225 BMT2Q1RMZ1 405 aa9.98□□□□□ -0.81
CHD9-219ENST00000569225 LRIT3Q3SXY7 679 aa9.98□□□□□ -0.81
CHD9-219ENST00000569225 GLB1LQ6UWU2 654 aa9.98□□□□□ -0.81
CHD9-219ENST00000569225 EPM2AIP1Q7L775 607 aaPredicted RBP9.98□□□□□ -0.81
CHD9-219ENST00000569225 HS2ST1Q7LGA3 356 aa9.98□□□□□ -0.81
CHD9-219ENST00000569225 MRPL10Q7Z7H8 261 aaKnown RBP9.98□□□□□ -0.81
CHD9-219ENST00000569225 SPATA20Q8TB22 786 aa9.98□□□□□ -0.81
CHD9-219ENST00000569225 GOLGA5Q8TBA6 731 aa9.98□□□□□ -0.81
CHD9-219ENST00000569225 ZNF507Q8TCN5 953 aa9.98□□□□□ -0.81
CHD9-219ENST00000569225 YME1L1Q96TA2 773 aa9.98□□□□□ -0.81
CHD9-219ENST00000569225 RAD9AQ99638 391 aa9.98□□□□□ -0.81
CHD9-219ENST00000569225 EIF2AQ9BY44 585 aaKnown RBP9.98□□□□□ -0.81
CHD9-219ENST00000569225 MSRAQ9UJ68 235 aa9.98□□□□□ -0.81
CHD9-219ENST00000569225 INSL6Q9Y581 213 aa9.98□□□□□ -0.81
CHD9-219ENST00000569225 PCDHA5Q9Y5H7 936 aa9.98□□□□□ -0.81
CHD9-219ENST00000569225 TTLL13PA6NNM8 815 aa9.98□□□□□ -0.81
CHD9-219ENST00000569225 TLL1O43897 1013 aa9.98□□□□□ -0.81
CHD9-219ENST00000569225 PRPF6O94906 941 aaKnown RBP9.98□□□□□ -0.81
CHD9-219ENST00000569225 EDN1P05305 212 aa9.98□□□□□ -0.81
CHD9-219ENST00000569225 PROZP22891 400 aa9.98□□□□□ -0.81
CHD9-219ENST00000569225 SMAD3P84022 425 aaKnown RBP9.98□□□□□ -0.81
CHD9-219ENST00000569225 MCL1Q07820 350 aa9.98□□□□□ -0.81
CHD9-219ENST00000569225 STK4Q13043 487 aa9.98□□□□□ -0.81
CHD9-219ENST00000569225 CAMK4Q16566 473 aa9.98□□□□□ -0.81
CHD9-219ENST00000569225 EEF1DP3Q658K8 133 aa9.98□□□□□ -0.81
CHD9-219ENST00000569225 FAM117BQ6P1L5 589 aa9.98□□□□□ -0.81
CHD9-219ENST00000569225 CDR2LQ86X02 465 aaPredicted RBP9.98□□□□□ -0.81
CHD9-219ENST00000569225 GPT2Q8TD30 523 aa9.98□□□□□ -0.81
CHD9-219ENST00000569225 SCFD1Q8WVM8 642 aa9.98□□□□□ -0.81
CHD9-219ENST00000569225 CCDC94Q9BW85 323 aaPredicted RBP9.98□□□□□ -0.81
CHD9-219ENST00000569225 GBP3Q9H0R5 595 aa9.98□□□□□ -0.81
CHD9-219ENST00000569225 CDT1Q9H211 546 aa9.98□□□□□ -0.81
CHD9-219ENST00000569225 PTPRHQ9HD43 1115 aa9.98□□□□□ -0.81
CHD9-219ENST00000569225 CGNQ9P2M7 1197 aaKnown RBP9.98□□□□□ -0.81
CHD9-219ENST00000569225 USP20Q9Y2K6 914 aa9.98□□□□□ -0.81
CHD9-219ENST00000569225 IPPQ9Y573 584 aa9.98□□□□□ -0.81
CHD9-219ENST00000569225 PCDHA11Q9Y5I1 949 aa9.98□□□□□ -0.81
CHD9-219ENST00000569225 ZMYM2Q9UBW7 1377 aa9.97□□□□□ -0.81
CHD9-219ENST00000569225 KIAA0391O15091 583 aaKnown RBP9.97□□□□□ -0.81
CHD9-219ENST00000569225 HARSP12081 509 aaKnown RBP9.97□□□□□ -0.81
CHD9-219ENST00000569225 PPP1R2P41236 205 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms