RNA–Protein interactions for RNA: ENST00000566703.1

RNF40-209, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 808 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-209ENST00000566703 INO80B-WBP1J3KQ70 363 aa16.67■□□□□ 0.26
RNF40-209ENST00000566703 NEMFO60524 1076 aa16.67■□□□□ 0.26
RNF40-209ENST00000566703 DTNBO60941 627 aa16.67■□□□□ 0.26
RNF40-209ENST00000566703 C1RP00736 705 aa16.67■□□□□ 0.26
RNF40-209ENST00000566703 POMCP01189 267 aa16.67■□□□□ 0.26
RNF40-209ENST00000566703 KLRC2P26717 231 aa16.67■□□□□ 0.26
RNF40-209ENST00000566703 AVPR2P30518 371 aa16.67■□□□□ 0.26
RNF40-209ENST00000566703 TXKP42681 527 aa16.67■□□□□ 0.26
RNF40-209ENST00000566703 RARRES1P49788 294 aa16.67■□□□□ 0.26
RNF40-209ENST00000566703 MTMR3Q13615 1198 aa16.67■□□□□ 0.26
RNF40-209ENST00000566703 IER5LQ5T953 404 aa16.67■□□□□ 0.26
RNF40-209ENST00000566703 GPR149Q86SP6 731 aa16.67■□□□□ 0.26
RNF40-209ENST00000566703 COLGALT2Q8IYK4 626 aa16.67■□□□□ 0.26
RNF40-209ENST00000566703 C12orf76Q8N812 135 aaPredicted RBP16.67■□□□□ 0.26
RNF40-209ENST00000566703 SFXN1Q9H9B4 322 aa16.67■□□□□ 0.26
RNF40-209ENST00000566703 DAXXQ9UER7 740 aaPredicted RBP16.67■□□□□ 0.26
RNF40-209ENST00000566703 NR1I2O75469 434 aa16.66■□□□□ 0.26
RNF40-209ENST00000566703 EFEMP2O95967 443 aa16.66■□□□□ 0.26
RNF40-209ENST00000566703 SOD2P04179 222 aa16.66■□□□□ 0.26
RNF40-209ENST00000566703 CNPP09543 421 aaKnown RBP16.66■□□□□ 0.26
RNF40-209ENST00000566703 CLCN4P51793 760 aa16.66■□□□□ 0.26
RNF40-209ENST00000566703 NEK4P51957 841 aa16.66■□□□□ 0.26
RNF40-209ENST00000566703 MBTD1Q05BQ5 628 aa16.66■□□□□ 0.26
RNF40-209ENST00000566703 DSC1Q08554 894 aa16.66■□□□□ 0.26
RNF40-209ENST00000566703 CYP26C1Q6V0L0 522 aa16.66■□□□□ 0.26
RNF40-209ENST00000566703 C15orf39Q6ZRI6 1047 aa16.66■□□□□ 0.26
RNF40-209ENST00000566703 GPR65Q8IYL9 337 aa16.66■□□□□ 0.26
RNF40-209ENST00000566703 TDRD5Q8NAT2 981 aaKnown RBP16.66■□□□□ 0.26
RNF40-209ENST00000566703 PRSS33Q8NF86 280 aa16.66■□□□□ 0.26
RNF40-209ENST00000566703 RPS6KC1Q96S38 1066 aa16.66■□□□□ 0.26
RNF40-209ENST00000566703 GAD1Q99259 594 aa16.66■□□□□ 0.26
RNF40-209ENST00000566703 HERC2P3Q9BVR0 1158 aa16.66■□□□□ 0.26
RNF40-209ENST00000566703 EIF2AQ9BY44 585 aaKnown RBP16.66■□□□□ 0.26
RNF40-209ENST00000566703 DPP7Q9UHL4 492 aa16.66■□□□□ 0.26
RNF40-209ENST00000566703 CDH22Q9UJ99 828 aa16.66■□□□□ 0.26
RNF40-209ENST00000566703 DBR1Q9UK59 544 aaKnown RBP16.66■□□□□ 0.26
RNF40-209ENST00000566703 ZNF318Q5VUA4 2279 aa16.65■□□□□ 0.26
RNF40-209ENST00000566703 ARL5CA6NH57 179 aa16.65■□□□□ 0.26
RNF40-209ENST00000566703 LARGE1O95461 756 aa16.65■□□□□ 0.26
RNF40-209ENST00000566703 URODP06132 367 aa16.65■□□□□ 0.26
RNF40-209ENST00000566703 ARF4P18085 180 aaPredicted RBP16.65■□□□□ 0.26
RNF40-209ENST00000566703 GLRA2P23416 452 aa16.65■□□□□ 0.26
RNF40-209ENST00000566703 SP100P23497 879 aaPredicted RBP16.65■□□□□ 0.26
RNF40-209ENST00000566703 CAPSQ13938 189 aa16.65■□□□□ 0.26
RNF40-209ENST00000566703 AMHR2Q16671 573 aa16.65■□□□□ 0.26
RNF40-209ENST00000566703 ELMSAN1Q6PJG2 1045 aa16.65■□□□□ 0.26
RNF40-209ENST00000566703 RNF168Q8IYW5 571 aaPredicted RBP16.65■□□□□ 0.26
RNF40-209ENST00000566703 CMASQ8NFW8 434 aaPredicted RBP16.65■□□□□ 0.26
RNF40-209ENST00000566703 ASAP3Q8TDY4 903 aa16.65■□□□□ 0.26
RNF40-209ENST00000566703 ACSF2Q96CM8 615 aaPredicted RBP16.65■□□□□ 0.26
RNF40-209ENST00000566703 CPB2Q96IY4 423 aa16.65■□□□□ 0.26
RNF40-209ENST00000566703 CCDC43Q96MW1 224 aaKnown RBP16.65■□□□□ 0.26
RNF40-209ENST00000566703 COLEC11Q9BWP8 271 aa16.65■□□□□ 0.26
RNF40-209ENST00000566703 RHOBTB2Q9BYZ6 727 aa16.65■□□□□ 0.26
RNF40-209ENST00000566703 RNF39Q9H2S5 420 aa16.65■□□□□ 0.26
RNF40-209ENST00000566703 RXFP1Q9HBX9 757 aa16.65■□□□□ 0.26
RNF40-209ENST00000566703 TUFT1Q9NNX1 390 aa16.65■□□□□ 0.26
RNF40-209ENST00000566703 ZMYM2Q9UBW7 1377 aa16.64■□□□□ 0.26
RNF40-209ENST00000566703 A0A1B0GUA9 196 aa16.64■□□□□ 0.25
RNF40-209ENST00000566703 ADH1AP07327 375 aa16.64■□□□□ 0.25
RNF40-209ENST00000566703 WEE2P0C1S8 567 aa16.64■□□□□ 0.25
RNF40-209ENST00000566703 OR1G1P47890 313 aa16.64■□□□□ 0.25
RNF40-209ENST00000566703 TCF15Q12870 199 aa16.64■□□□□ 0.25
RNF40-209ENST00000566703 ORC2Q13416 577 aaPredicted RBP16.64■□□□□ 0.25
RNF40-209ENST00000566703 SAFBQ15424 915 aaKnown RBP eCLIP16.64■□□□□ 0.25
RNF40-209ENST00000566703 KANK3Q6NY19 840 aa16.64■□□□□ 0.25
RNF40-209ENST00000566703 TMC5Q6UXY8 1006 aa16.64■□□□□ 0.25
RNF40-209ENST00000566703 OTOP3Q7RTS5 596 aa16.64■□□□□ 0.25
RNF40-209ENST00000566703 MCPH1Q8NEM0 835 aa16.64■□□□□ 0.25
RNF40-209ENST00000566703 PIGOQ8TEQ8 1089 aa16.64■□□□□ 0.25
RNF40-209ENST00000566703 HDAC7Q8WUI4 952 aa16.64■□□□□ 0.25
RNF40-209ENST00000566703 TRIM6Q9C030 488 aaPredicted RBP16.64■□□□□ 0.25
RNF40-209ENST00000566703 MARCH5Q9NX47 278 aa16.64■□□□□ 0.25
RNF40-209ENST00000566703 MIOSQ9NXC5 875 aa16.64■□□□□ 0.25
RNF40-209ENST00000566703 LIMD1Q9UGP4 676 aa16.64■□□□□ 0.25
RNF40-209ENST00000566703 JAK2O60674 1132 aa16.63■□□□□ 0.25
RNF40-209ENST00000566703 BRD1O95696 1058 aa16.63■□□□□ 0.25
RNF40-209ENST00000566703 SPATA31C1P0DKV0 1188 aa16.63■□□□□ 0.25
RNF40-209ENST00000566703 MLH1P40692 756 aa16.63■□□□□ 0.25
RNF40-209ENST00000566703 VCPP55072 806 aaKnown RBP16.63■□□□□ 0.25
RNF40-209ENST00000566703 DSG1Q02413 1049 aa16.63■□□□□ 0.25
RNF40-209ENST00000566703 FAM187BQ17R55 369 aa16.63■□□□□ 0.25
RNF40-209ENST00000566703 KIAA0319Q5VV43 1072 aa16.63■□□□□ 0.25
RNF40-209ENST00000566703 SLC27A1Q6PCB7 646 aa16.63■□□□□ 0.25
RNF40-209ENST00000566703 PPP4R3CPQ6ZMV5 832 aa16.63■□□□□ 0.25
RNF40-209ENST00000566703 CCDC149Q6ZUS6 474 aa16.63■□□□□ 0.25
RNF40-209ENST00000566703 PRIMPOLQ96LW4 560 aa16.63■□□□□ 0.25
RNF40-209ENST00000566703 NACC1Q96RE7 527 aa16.63■□□□□ 0.25
RNF40-209ENST00000566703 POLR3CQ9BUI4 534 aaPredicted RBP16.63■□□□□ 0.25
RNF40-209ENST00000566703 POLR3FQ9H1D9 316 aaPredicted RBP16.63■□□□□ 0.25
RNF40-209ENST00000566703 CHST7Q9NS84 486 aa16.63■□□□□ 0.25
RNF40-209ENST00000566703 PRG3Q9Y2Y8 225 aaPredicted RBP16.63■□□□□ 0.25
RNF40-209ENST00000566703 HES2Q9Y543 173 aa16.63■□□□□ 0.25
RNF40-209ENST00000566703 SPDYE4A6NLX3 237 aa16.62■□□□□ 0.25
RNF40-209ENST00000566703 WNT7AO00755 349 aa16.62■□□□□ 0.25
RNF40-209ENST00000566703 PAPLNO95428 1278 aa16.62■□□□□ 0.25
RNF40-209ENST00000566703 SSBP05455 408 aaKnown RBP eCLIP16.62■□□□□ 0.25
RNF40-209ENST00000566703 MUTP22033 750 aa16.62■□□□□ 0.25
RNF40-209ENST00000566703 GLUD2P49448 558 aa16.62■□□□□ 0.25
RNF40-209ENST00000566703 SCNN1GP51170 649 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms