RNA–Protein interactions for RNA: ENST00000565173.1

CAPN3-213, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-213ENST00000565173 A0A087WWV3 80 aa9.56□□□□□ -0.88
CAPN3-213ENST00000565173 ARL5CA6NH57 179 aa9.56□□□□□ -0.88
CAPN3-213ENST00000565173 MARCH6O60337 910 aa9.56□□□□□ -0.88
CAPN3-213ENST00000565173 BAG4O95429 457 aaKnown RBP9.56□□□□□ -0.88
CAPN3-213ENST00000565173 ASGR2P07307 311 aa9.56□□□□□ -0.88
CAPN3-213ENST00000565173 AXLP30530 894 aa9.56□□□□□ -0.88
CAPN3-213ENST00000565173 RARRES1P49788 294 aa9.56□□□□□ -0.88
CAPN3-213ENST00000565173 PTPN5P54829 565 aa9.56□□□□□ -0.88
CAPN3-213ENST00000565173 MBTD1Q05BQ5 628 aa9.56□□□□□ -0.88
CAPN3-213ENST00000565173 DSC1Q08554 894 aa9.56□□□□□ -0.88
CAPN3-213ENST00000565173 MXD4Q14582 209 aaPredicted RBP9.56□□□□□ -0.88
CAPN3-213ENST00000565173 ANKRD1Q15327 319 aa9.56□□□□□ -0.88
CAPN3-213ENST00000565173 KIAA0319Q5VV43 1072 aa9.56□□□□□ -0.88
CAPN3-213ENST00000565173 GPR149Q86SP6 731 aa9.56□□□□□ -0.88
CAPN3-213ENST00000565173 CABP7Q86V35 215 aa9.56□□□□□ -0.88
CAPN3-213ENST00000565173 PPFIBP1Q86W92 1011 aa9.56□□□□□ -0.88
CAPN3-213ENST00000565173 UBALD2Q8IYN6 164 aa9.56□□□□□ -0.88
CAPN3-213ENST00000565173 CNNM3Q8NE01 707 aa9.56□□□□□ -0.88
CAPN3-213ENST00000565173 NSUN7Q8NE18 718 aaKnown RBP9.56□□□□□ -0.88
CAPN3-213ENST00000565173 GSTCDQ8NEC7 633 aa9.56□□□□□ -0.88
CAPN3-213ENST00000565173 ASAP3Q8TDY4 903 aa9.56□□□□□ -0.88
CAPN3-213ENST00000565173 WASF1Q92558 559 aa9.56□□□□□ -0.88
CAPN3-213ENST00000565173 GTF3C6Q969F1 213 aa9.56□□□□□ -0.88
CAPN3-213ENST00000565173 CPB2Q96IY4 423 aa9.56□□□□□ -0.88
CAPN3-213ENST00000565173 ZFP42Q96MM3 310 aa9.56□□□□□ -0.88
CAPN3-213ENST00000565173 GAD1Q99259 594 aa9.56□□□□□ -0.88
CAPN3-213ENST00000565173 PRRX2Q99811 253 aa9.56□□□□□ -0.88
CAPN3-213ENST00000565173 NFKBIZQ9BYH8 718 aa9.56□□□□□ -0.88
CAPN3-213ENST00000565173 CSRNP2Q9H175 543 aa9.56□□□□□ -0.88
CAPN3-213ENST00000565173 TTC12Q9H892 705 aaPredicted RBP9.56□□□□□ -0.88
CAPN3-213ENST00000565173 UBN1Q9NPG3 1134 aa9.56□□□□□ -0.88
CAPN3-213ENST00000565173 ANKEF1Q9NU02 776 aa9.56□□□□□ -0.88
CAPN3-213ENST00000565173 STK39Q9UEW8 545 aa9.56□□□□□ -0.88
CAPN3-213ENST00000565173 LIMD1Q9UGP4 676 aa9.56□□□□□ -0.88
CAPN3-213ENST00000565173 HES2Q9Y543 173 aa9.56□□□□□ -0.88
CAPN3-213ENST00000565173 ARID2Q68CP9 1835 aa9.56□□□□□ -0.88
CAPN3-213ENST00000565173 FRYLO94915 3013 aa9.56□□□□□ -0.88
CAPN3-213ENST00000565173 F8W810 466 aa9.55□□□□□ -0.88
CAPN3-213ENST00000565173 JAK2O60674 1132 aa9.55□□□□□ -0.88
CAPN3-213ENST00000565173 DGAT1O75907 488 aa9.55□□□□□ -0.88
CAPN3-213ENST00000565173 SOD2P04179 222 aa9.55□□□□□ -0.88
CAPN3-213ENST00000565173 SSBP05455 408 aaKnown RBP eCLIP9.55□□□□□ -0.88
CAPN3-213ENST00000565173 SPATA31C1P0DKV0 1188 aa9.55□□□□□ -0.88
CAPN3-213ENST00000565173 XRCC6P12956 609 aaKnown RBP eCLIP9.55□□□□□ -0.88
CAPN3-213ENST00000565173 ITGA4P13612 1032 aa9.55□□□□□ -0.88
CAPN3-213ENST00000565173 ARF4P18085 180 aaPredicted RBP9.55□□□□□ -0.88
CAPN3-213ENST00000565173 GLRA2P23416 452 aa9.55□□□□□ -0.88
CAPN3-213ENST00000565173 KLRC2P26717 231 aa9.55□□□□□ -0.88
CAPN3-213ENST00000565173 ST3GAL1Q11201 340 aa9.55□□□□□ -0.88
CAPN3-213ENST00000565173 MTMR3Q13615 1198 aa9.55□□□□□ -0.88
CAPN3-213ENST00000565173 CAPSQ13938 189 aa9.55□□□□□ -0.88
CAPN3-213ENST00000565173 CALCRLQ16602 461 aa9.55□□□□□ -0.88
CAPN3-213ENST00000565173 NOTUMQ6P988 496 aa9.55□□□□□ -0.88
CAPN3-213ENST00000565173 ZBTB33Q86T24 672 aa9.55□□□□□ -0.88
CAPN3-213ENST00000565173 PLCD3Q8N3E9 789 aa9.55□□□□□ -0.88
CAPN3-213ENST00000565173 TMEM87AQ8NBN3 555 aa9.55□□□□□ -0.88
CAPN3-213ENST00000565173 PIGOQ8TEQ8 1089 aa9.55□□□□□ -0.88
CAPN3-213ENST00000565173 CCDC51Q96ER9 411 aa9.55□□□□□ -0.88
CAPN3-213ENST00000565173 FAM193BQ96PV7 902 aaPredicted RBP9.55□□□□□ -0.88
CAPN3-213ENST00000565173 RPS6KC1Q96S38 1066 aa9.55□□□□□ -0.88
CAPN3-213ENST00000565173 EMILIN2Q9BXX0 1053 aa9.55□□□□□ -0.88
CAPN3-213ENST00000565173 TMEM60Q9H2L4 133 aa9.55□□□□□ -0.88
CAPN3-213ENST00000565173 SFXN1Q9H9B4 322 aa9.55□□□□□ -0.88
CAPN3-213ENST00000565173 MRPL17Q9NRX2 175 aaKnown RBP9.55□□□□□ -0.88
CAPN3-213ENST00000565173 CHST7Q9NS84 486 aa9.55□□□□□ -0.88
CAPN3-213ENST00000565173 DBR1Q9UK59 544 aaKnown RBP9.55□□□□□ -0.88
CAPN3-213ENST00000565173 ZFHX2Q9C0A1 2572 aaPredicted RBP9.55□□□□□ -0.88
CAPN3-213ENST00000565173 DENND4AQ7Z401 1863 aa9.54□□□□□ -0.88
CAPN3-213ENST00000565173 A0A1B0GUA9 196 aa9.54□□□□□ -0.88
CAPN3-213ENST00000565173 INO80B-WBP1J3KQ70 363 aa9.54□□□□□ -0.88
CAPN3-213ENST00000565173 C2CD2LO14523 706 aa9.54□□□□□ -0.88
CAPN3-213ENST00000565173 TEX28O15482 410 aa9.54□□□□□ -0.88
CAPN3-213ENST00000565173 B4GALT5O43286 388 aa9.54□□□□□ -0.88
CAPN3-213ENST00000565173 NEMFO60524 1076 aa9.54□□□□□ -0.88
CAPN3-213ENST00000565173 ERLIN2O94905 339 aa9.54□□□□□ -0.88
CAPN3-213ENST00000565173 PAPLNO95428 1278 aa9.54□□□□□ -0.88
CAPN3-213ENST00000565173 MLH1P40692 756 aa9.54□□□□□ -0.88
CAPN3-213ENST00000565173 TXKP42681 527 aa9.54□□□□□ -0.88
CAPN3-213ENST00000565173 OR1G1P47890 313 aa9.54□□□□□ -0.88
CAPN3-213ENST00000565173 SCNN1GP51170 649 aa9.54□□□□□ -0.88
CAPN3-213ENST00000565173 C15orf39Q6ZRI6 1047 aa9.54□□□□□ -0.88
CAPN3-213ENST00000565173 CATSPER3Q86XQ3 398 aa9.54□□□□□ -0.88
CAPN3-213ENST00000565173 DIS3L2Q8IYB7 885 aaKnown RBP9.54□□□□□ -0.88
CAPN3-213ENST00000565173 TMEM105Q8N8V8 129 aa9.54□□□□□ -0.88
CAPN3-213ENST00000565173 TDRD5Q8NAT2 981 aaKnown RBP9.54□□□□□ -0.88
CAPN3-213ENST00000565173 HERC2P3Q9BVR0 1158 aa9.54□□□□□ -0.88
CAPN3-213ENST00000565173 NXF3Q9H4D5 531 aaKnown RBP9.54□□□□□ -0.88
CAPN3-213ENST00000565173 RXFP1Q9HBX9 757 aa9.54□□□□□ -0.88
CAPN3-213ENST00000565173 GIT1Q9Y2X7 761 aa9.54□□□□□ -0.88
CAPN3-213ENST00000565173 PRG3Q9Y2Y8 225 aaPredicted RBP9.54□□□□□ -0.88
CAPN3-213ENST00000565173 POTEMA6NI47 508 aa9.53□□□□□ -0.88
CAPN3-213ENST00000565173 N4BP1O75113 896 aaKnown RBP9.53□□□□□ -0.88
CAPN3-213ENST00000565173 SEC24BO95487 1268 aa9.53□□□□□ -0.88
CAPN3-213ENST00000565173 AKAP5P24588 427 aa9.53□□□□□ -0.88
CAPN3-213ENST00000565173 NEK4P51957 841 aa9.53□□□□□ -0.88
CAPN3-213ENST00000565173 NUBP1P53384 320 aa9.53□□□□□ -0.88
CAPN3-213ENST00000565173 DSG1Q02413 1049 aa9.53□□□□□ -0.88
CAPN3-213ENST00000565173 NCBP1Q09161 790 aaKnown RBP9.53□□□□□ -0.88
CAPN3-213ENST00000565173 TFDP1Q14186 410 aa9.53□□□□□ -0.88
CAPN3-213ENST00000565173 CDR2LQ86X02 465 aaPredicted RBP9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms