RNA–Protein interactions for RNA: ENST00000563919.1

SCAPER-209, Transcript of S-phase cyclin A associated protein in the ER, humanhuman

TSL 4

Gene SCAPER, Length 641 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPER-209ENST00000563919 RDM1Q8NG50 284 aa16.54■□□□□ 0.24
SCAPER-209ENST00000563919 CCDC12Q8WUD4 166 aaPredicted RBP16.54■□□□□ 0.24
SCAPER-209ENST00000563919 HDAC7Q8WUI4 952 aa16.54■□□□□ 0.24
SCAPER-209ENST00000563919 GJA10Q969M2 543 aa16.54■□□□□ 0.24
SCAPER-209ENST00000563919 TEKT3Q9BXF9 490 aa16.54■□□□□ 0.24
SCAPER-209ENST00000563919 FOXQ1Q9C009 403 aa16.54■□□□□ 0.24
SCAPER-209ENST00000563919 RSAD1Q9HA92 442 aa16.54■□□□□ 0.24
SCAPER-209ENST00000563919 IFT122Q9HBG6 1241 aa16.54■□□□□ 0.24
SCAPER-209ENST00000563919 AGPAT5Q9NUQ2 364 aa16.54■□□□□ 0.24
SCAPER-209ENST00000563919 MARCH5Q9NX47 278 aa16.54■□□□□ 0.24
SCAPER-209ENST00000563919 CYP46A1Q9Y6A2 500 aa16.54■□□□□ 0.24
SCAPER-209ENST00000563919 MTCL1Q9Y4B5 1905 aaKnown RBP16.53■□□□□ 0.24
SCAPER-209ENST00000563919 KLF18A0A0U1RQI7 1052 aa16.53■□□□□ 0.24
SCAPER-209ENST00000563919 CCDC196A0A1B0GTZ2 297 aa16.53■□□□□ 0.24
SCAPER-209ENST00000563919 POTEMA6NI47 508 aa16.53■□□□□ 0.24
SCAPER-209ENST00000563919 C1RP00736 705 aa16.53■□□□□ 0.24
SCAPER-209ENST00000563919 SPATA31D3P0C874 917 aa16.53■□□□□ 0.24
SCAPER-209ENST00000563919 HOXA11P31270 313 aaPredicted RBP16.53■□□□□ 0.24
SCAPER-209ENST00000563919 STARD6P59095 220 aa16.53■□□□□ 0.24
SCAPER-209ENST00000563919 HTR4Q13639 388 aa16.53■□□□□ 0.24
SCAPER-209ENST00000563919 SPATA31D4Q6ZUB0 917 aa16.53■□□□□ 0.24
SCAPER-209ENST00000563919 RNF168Q8IYW5 571 aaPredicted RBP16.53■□□□□ 0.24
SCAPER-209ENST00000563919 NLRP4Q96MN2 994 aa16.53■□□□□ 0.24
SCAPER-209ENST00000563919 NT5C3AQ9H0P0 336 aa16.53■□□□□ 0.24
SCAPER-209ENST00000563919 ZSWIM6Q9HCJ5 1215 aa16.53■□□□□ 0.24
SCAPER-209ENST00000563919 ASPMQ8IZT6 3477 aa16.53■□□□□ 0.24
SCAPER-209ENST00000563919 USP24Q9UPU5 2620 aa16.52■□□□□ 0.24
SCAPER-209ENST00000563919 DDX11L8A8MPP1 907 aa16.52■□□□□ 0.24
SCAPER-209ENST00000563919 KINO60870 393 aaKnown RBP16.52■□□□□ 0.24
SCAPER-209ENST00000563919 PSMD10O75832 226 aa16.52■□□□□ 0.24
SCAPER-209ENST00000563919 GLUD2P49448 558 aa16.52■□□□□ 0.24
SCAPER-209ENST00000563919 USP11P51784 963 aa16.52■□□□□ 0.24
SCAPER-209ENST00000563919 DSG1Q02413 1049 aa16.52■□□□□ 0.24
SCAPER-209ENST00000563919 UBXN11Q5T124 520 aa16.52■□□□□ 0.24
SCAPER-209ENST00000563919 Q6ZUG5 572 aa16.52■□□□□ 0.24
SCAPER-209ENST00000563919 RUFY3Q7L099 469 aa16.52■□□□□ 0.24
SCAPER-209ENST00000563919 MIER3Q7Z3K6 550 aa16.52■□□□□ 0.24
SCAPER-209ENST00000563919 COLGALT2Q8IYK4 626 aa16.52■□□□□ 0.24
SCAPER-209ENST00000563919 BICD2Q8TD16 824 aa16.52■□□□□ 0.24
SCAPER-209ENST00000563919 BORCS6Q96GS4 357 aa16.52■□□□□ 0.24
SCAPER-209ENST00000563919 PLEKHA4Q9H4M7 779 aa16.52■□□□□ 0.24
SCAPER-209ENST00000563919 PIDD1Q9HB75 910 aa16.52■□□□□ 0.24
SCAPER-209ENST00000563919 PRG3Q9Y2Y8 225 aaPredicted RBP16.52■□□□□ 0.24
SCAPER-209ENST00000563919 NUMBLQ9Y6R0 609 aa16.52■□□□□ 0.24
SCAPER-209ENST00000563919 DOCK6Q96HP0 2047 aa16.52■□□□□ 0.23
SCAPER-209ENST00000563919 GAS2O43903 313 aaKnown RBP16.51■□□□□ 0.23
SCAPER-209ENST00000563919 LRRN2O75325 713 aa16.51■□□□□ 0.23
SCAPER-209ENST00000563919 OR1G1P47890 313 aa16.51■□□□□ 0.23
SCAPER-209ENST00000563919 ZNF528Q3MIS6 628 aa16.51■□□□□ 0.23
SCAPER-209ENST00000563919 B3GNT9Q6UX72 402 aa16.51■□□□□ 0.23
SCAPER-209ENST00000563919 ANO5Q75V66 913 aa16.51■□□□□ 0.23
SCAPER-209ENST00000563919 PALB2Q86YC2 1186 aa16.51■□□□□ 0.23
SCAPER-209ENST00000563919 ST13P5Q8NFI4 369 aaPredicted RBP16.51■□□□□ 0.23
SCAPER-209ENST00000563919 SHDQ96IW2 340 aa16.51■□□□□ 0.23
SCAPER-209ENST00000563919 JPH2Q9BR39 696 aaPredicted RBP16.51■□□□□ 0.23
SCAPER-209ENST00000563919 PRKD2Q9BZL6 878 aa16.51■□□□□ 0.23
SCAPER-209ENST00000563919 MINDY3Q9H8M7 445 aa16.51■□□□□ 0.23
SCAPER-209ENST00000563919 UBN1Q9NPG3 1134 aa16.51■□□□□ 0.23
SCAPER-209ENST00000563919 CHST7Q9NS84 486 aa16.51■□□□□ 0.23
SCAPER-209ENST00000563919 ZDHHC7Q9NXF8 308 aa16.51■□□□□ 0.23
SCAPER-209ENST00000563919 NAP1L2Q9ULW6 460 aaPredicted RBP16.51■□□□□ 0.23
SCAPER-209ENST00000563919 LAMA1P25391 3075 aa16.51■□□□□ 0.23
SCAPER-209ENST00000563919 FRYQ5TBA9 3013 aa16.5■□□□□ 0.23
SCAPER-209ENST00000563919 PRPF3O43395 683 aaKnown RBP16.5■□□□□ 0.23
SCAPER-209ENST00000563919 TGM5O43548 720 aa16.5■□□□□ 0.23
SCAPER-209ENST00000563919 NCLP19338 710 aaKnown RBP16.5■□□□□ 0.23
SCAPER-209ENST00000563919 VARS2Q5ST30 1063 aaKnown RBP16.5■□□□□ 0.23
SCAPER-209ENST00000563919 LILRA6Q6PI73 481 aa16.5■□□□□ 0.23
SCAPER-209ENST00000563919 GET4Q7L5D6 327 aaPredicted RBP16.5■□□□□ 0.23
SCAPER-209ENST00000563919 BRF1Q92994 677 aa16.5■□□□□ 0.23
SCAPER-209ENST00000563919 RPP25Q9BUL9 199 aaKnown RBP16.5■□□□□ 0.23
SCAPER-209ENST00000563919 COL4A3BPQ9Y5P4 624 aa16.5■□□□□ 0.23
SCAPER-209ENST00000563919 ZFP37Q9Y6Q3 630 aaPredicted RBP16.5■□□□□ 0.23
SCAPER-209ENST00000563919 MIA3Q5JRA6 1907 aa16.49■□□□□ 0.23
SCAPER-209ENST00000563919 ARL5CA6NH57 179 aa16.49■□□□□ 0.23
SCAPER-209ENST00000563919 F8W810 466 aa16.49■□□□□ 0.23
SCAPER-209ENST00000563919 SRGAP2CP0DJJ0 459 aa16.49■□□□□ 0.23
SCAPER-209ENST00000563919 SDHBP21912 280 aa16.49■□□□□ 0.23
SCAPER-209ENST00000563919 ATXN1P54253 815 aaKnown RBP16.49■□□□□ 0.23
SCAPER-209ENST00000563919 GPC5P78333 572 aa16.49■□□□□ 0.23
SCAPER-209ENST00000563919 DSC1Q08554 894 aa16.49■□□□□ 0.23
SCAPER-209ENST00000563919 Q4G0T1 1027 aa16.49■□□□□ 0.23
SCAPER-209ENST00000563919 SRGAP1Q7Z6B7 1085 aa16.49■□□□□ 0.23
SCAPER-209ENST00000563919 SMG8Q8ND04 991 aaKnown RBP16.49■□□□□ 0.23
SCAPER-209ENST00000563919 PRPF31Q8WWY3 499 aaKnown RBP16.49■□□□□ 0.23
SCAPER-209ENST00000563919 PHKBQ93100 1093 aa16.49■□□□□ 0.23
SCAPER-209ENST00000563919 DDX23Q9BUQ8 820 aaKnown RBP16.49■□□□□ 0.23
SCAPER-209ENST00000563919 AGXT2Q9BYV1 514 aa16.49■□□□□ 0.23
SCAPER-209ENST00000563919 UPF2Q9HAU5 1272 aaKnown RBP16.49■□□□□ 0.23
SCAPER-209ENST00000563919 FBXO4Q9UKT5 387 aa16.49■□□□□ 0.23
SCAPER-209ENST00000563919 ZZEF1O43149 2961 aa16.48■□□□□ 0.23
SCAPER-209ENST00000563919 KANSL1LA0AUZ9 987 aa16.48■□□□□ 0.23
SCAPER-209ENST00000563919 SPTLC1O15269 473 aa16.48■□□□□ 0.23
SCAPER-209ENST00000563919 ITGA4P13612 1032 aa16.48■□□□□ 0.23
SCAPER-209ENST00000563919 CPA1P15085 419 aa16.48■□□□□ 0.23
SCAPER-209ENST00000563919 SNW1Q13573 536 aaKnown RBP16.48■□□□□ 0.23
SCAPER-209ENST00000563919 ANKRD1Q15327 319 aa16.48■□□□□ 0.23
SCAPER-209ENST00000563919 PLA2G4FQ68DD2 849 aa16.48■□□□□ 0.23
SCAPER-209ENST00000563919 PARM1Q6UWI2 310 aa16.48■□□□□ 0.23
SCAPER-209ENST00000563919 GPR65Q8IYL9 337 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms