RNA–Protein interactions for RNA: ENST00000563226.1

SMPD3-203, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,093 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-203ENST00000563226 STAT5BP51692 787 aa20.71■□□□□ 0.91
SMPD3-203ENST00000563226 KIF22Q14807 665 aa20.71■□□□□ 0.91
SMPD3-203ENST00000563226 TARBP2Q15633 366 aaKnown RBP20.71■□□□□ 0.91
SMPD3-203ENST00000563226 MEI1Q5TIA1 1274 aa20.71■□□□□ 0.91
SMPD3-203ENST00000563226 H2AFVQ71UI9 128 aa20.71■□□□□ 0.91
SMPD3-203ENST00000563226 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.71■□□□□ 0.91
SMPD3-203ENST00000563226 SLC20A1Q8WUM9 679 aa20.71■□□□□ 0.91
SMPD3-203ENST00000563226 RPGRIP1Q96KN7 1286 aa20.71■□□□□ 0.91
SMPD3-203ENST00000563226 FAM213AQ9BRX8 229 aa20.71■□□□□ 0.91
SMPD3-203ENST00000563226 DAAM1Q9Y4D1 1078 aa20.71■□□□□ 0.91
SMPD3-203ENST00000563226 CYP2C8P10632 490 aa20.71■□□□□ 0.91
SMPD3-203ENST00000563226 GARTP22102 1010 aa20.71■□□□□ 0.91
SMPD3-203ENST00000563226 TMEM63BQ5T3F8 832 aa20.71■□□□□ 0.91
SMPD3-203ENST00000563226 TRIM50Q86XT4 487 aa20.71■□□□□ 0.91
SMPD3-203ENST00000563226 FBXO16Q8IX29 292 aaPredicted RBP20.71■□□□□ 0.91
SMPD3-203ENST00000563226 GPD1LQ8N335 351 aa20.71■□□□□ 0.91
SMPD3-203ENST00000563226 SLC7A3Q8WY07 619 aa20.71■□□□□ 0.91
SMPD3-203ENST00000563226 MS4A14Q96JA4 679 aa20.71■□□□□ 0.91
SMPD3-203ENST00000563226 LRRIQ4A6NIV6 560 aa20.7■□□□□ 0.9
SMPD3-203ENST00000563226 EDN1P05305 212 aa20.7■□□□□ 0.9
SMPD3-203ENST00000563226 TGFB3P10600 412 aa20.7■□□□□ 0.9
SMPD3-203ENST00000563226 GALCP54803 685 aa20.7■□□□□ 0.9
SMPD3-203ENST00000563226 DRP2Q13474 957 aa20.7■□□□□ 0.9
SMPD3-203ENST00000563226 KCTD2Q14681 263 aa20.7■□□□□ 0.9
SMPD3-203ENST00000563226 LONRF2Q1L5Z9 754 aa20.7■□□□□ 0.9
SMPD3-203ENST00000563226 HSDL1Q3SXM5 330 aa20.7■□□□□ 0.9
SMPD3-203ENST00000563226 KRT39Q6A163 491 aa20.7■□□□□ 0.9
SMPD3-203ENST00000563226 ZNF572Q7Z3I7 529 aaPredicted RBP20.7■□□□□ 0.9
SMPD3-203ENST00000563226 TAS1R2Q8TE23 839 aa20.7■□□□□ 0.9
SMPD3-203ENST00000563226 AFAP1L1Q8TED9 768 aa20.7■□□□□ 0.9
SMPD3-203ENST00000563226 SEPT1Q8WYJ6 367 aa20.7■□□□□ 0.9
SMPD3-203ENST00000563226 KREMEN1Q96MU8 473 aa20.7■□□□□ 0.9
SMPD3-203ENST00000563226 HAPLN2Q9GZV7 340 aa20.7■□□□□ 0.9
SMPD3-203ENST00000563226 TAS2R14Q9NYV8 317 aa20.7■□□□□ 0.9
SMPD3-203ENST00000563226 ATP8B3O60423 1300 aa20.7■□□□□ 0.9
SMPD3-203ENST00000563226 DLATP10515 647 aaKnown RBP20.69■□□□□ 0.9
SMPD3-203ENST00000563226 NOP2P46087 812 aaKnown RBP20.69■□□□□ 0.9
SMPD3-203ENST00000563226 LIG4P49917 911 aa20.69■□□□□ 0.9
SMPD3-203ENST00000563226 ERVK-9P63128 1117 aa20.69■□□□□ 0.9
SMPD3-203ENST00000563226 PTPROQ16827 1216 aa20.69■□□□□ 0.9
SMPD3-203ENST00000563226 LRRC57Q8N9N7 239 aa20.69■□□□□ 0.9
SMPD3-203ENST00000563226 TMC2Q8TDI7 906 aa20.69■□□□□ 0.9
SMPD3-203ENST00000563226 ZNF408Q9H9D4 720 aa20.69■□□□□ 0.9
SMPD3-203ENST00000563226 TMEM8AQ9HCN3 771 aa20.69■□□□□ 0.9
SMPD3-203ENST00000563226 ABCB6Q9NP58 842 aa20.69■□□□□ 0.9
SMPD3-203ENST00000563226 MARK3P27448 753 aa20.69■□□□□ 0.9
SMPD3-203ENST00000563226 NAMPTP43490 491 aa20.69■□□□□ 0.9
SMPD3-203ENST00000563226 WNT7BP56706 349 aa20.69■□□□□ 0.9
SMPD3-203ENST00000563226 BEND6Q5SZJ8 279 aaPredicted RBP20.69■□□□□ 0.9
SMPD3-203ENST00000563226 FAM160B1Q5W0V3 765 aa20.69■□□□□ 0.9
SMPD3-203ENST00000563226 COPS5Q92905 334 aa20.69■□□□□ 0.9
SMPD3-203ENST00000563226 GPR20Q99678 358 aa20.69■□□□□ 0.9
SMPD3-203ENST00000563226 EFCC1Q9HA90 598 aa20.69■□□□□ 0.9
SMPD3-203ENST00000563226 TSKSQ9UJT2 592 aa20.69■□□□□ 0.9
SMPD3-203ENST00000563226 H0YCG3 227 aa20.68■□□□□ 0.9
SMPD3-203ENST00000563226 PLA2G4AP47712 749 aa20.68■□□□□ 0.9
SMPD3-203ENST00000563226 SNAPC2Q13487 334 aa20.68■□□□□ 0.9
SMPD3-203ENST00000563226 KRT222Q8N1A0 295 aa20.68■□□□□ 0.9
SMPD3-203ENST00000563226 PPM1KQ8N3J5 372 aa20.68■□□□□ 0.9
SMPD3-203ENST00000563226 SPATA4Q8NEY3 305 aa20.68■□□□□ 0.9
SMPD3-203ENST00000563226 TPCN2Q8NHX9 752 aa20.68■□□□□ 0.9
SMPD3-203ENST00000563226 DEPTORQ8TB45 409 aa20.68■□□□□ 0.9
SMPD3-203ENST00000563226 HNRNPLLQ8WVV9 542 aaKnown RBP20.68■□□□□ 0.9
SMPD3-203ENST00000563226 ZBTB45Q96K62 511 aaPredicted RBP20.68■□□□□ 0.9
SMPD3-203ENST00000563226 AGPAT1Q99943 283 aa20.68■□□□□ 0.9
SMPD3-203ENST00000563226 FUT8Q9BYC5 575 aa20.68■□□□□ 0.9
SMPD3-203ENST00000563226 SUGCTQ9HAC7 445 aa20.68■□□□□ 0.9
SMPD3-203ENST00000563226 NRBP2Q9NSY0 501 aa20.68■□□□□ 0.9
SMPD3-203ENST00000563226 SEPT11Q9NVA2 429 aaKnown RBP20.68■□□□□ 0.9
SMPD3-203ENST00000563226 COQ4Q9Y3A0 265 aa20.68■□□□□ 0.9
SMPD3-203ENST00000563226 CCDC172P0C7W6 258 aa20.68■□□□□ 0.9
SMPD3-203ENST00000563226 TNFAIP3P21580 790 aa20.68■□□□□ 0.9
SMPD3-203ENST00000563226 COPB2P35606 906 aa20.68■□□□□ 0.9
SMPD3-203ENST00000563226 NLRP11P59045 1033 aaKnown RBP20.68■□□□□ 0.9
SMPD3-203ENST00000563226 CAPSQ13938 189 aa20.68■□□□□ 0.9
SMPD3-203ENST00000563226 CELF3Q5SZQ8 465 aaKnown RBP20.68■□□□□ 0.9
SMPD3-203ENST00000563226 SV2AQ7L0J3 742 aa20.68■□□□□ 0.9
SMPD3-203ENST00000563226 ACP6Q9NPH0 428 aa20.68■□□□□ 0.9
SMPD3-203ENST00000563226 INTUQ9ULD6 942 aa20.68■□□□□ 0.9
SMPD3-203ENST00000563226 USP8P40818 1118 aa20.67■□□□□ 0.9
SMPD3-203ENST00000563226 RFC5P40937 340 aa20.67■□□□□ 0.9
SMPD3-203ENST00000563226 GPC3P51654 580 aa20.67■□□□□ 0.9
SMPD3-203ENST00000563226 STRN3Q13033 797 aa20.67■□□□□ 0.9
SMPD3-203ENST00000563226 CCDC181Q5TID7 509 aa20.67■□□□□ 0.9
SMPD3-203ENST00000563226 MAP1SQ66K74 1059 aaPredicted RBP20.67■□□□□ 0.9
SMPD3-203ENST00000563226 LMBRD2Q68DH5 695 aaPredicted RBP20.67■□□□□ 0.9
SMPD3-203ENST00000563226 WDR93Q6P2C0 686 aa20.67■□□□□ 0.9
SMPD3-203ENST00000563226 FMNL3Q8IVF7 1028 aa20.67■□□□□ 0.9
SMPD3-203ENST00000563226 HELQQ8TDG4 1101 aa20.67■□□□□ 0.9
SMPD3-203ENST00000563226 SLC10A4Q96EP9 437 aa20.67■□□□□ 0.9
SMPD3-203ENST00000563226 PDGFCQ9NRA1 345 aa20.67■□□□□ 0.9
SMPD3-203ENST00000563226 A0A0A6YYK5 440 aaPredicted RBP20.66■□□□□ 0.9
SMPD3-203ENST00000563226 EXTL3O43909 919 aa20.66■□□□□ 0.9
SMPD3-203ENST00000563226 ZMYND10O75800 440 aa20.66■□□□□ 0.9
SMPD3-203ENST00000563226 SGPL1O95470 568 aa20.66■□□□□ 0.9
SMPD3-203ENST00000563226 ABCB4P21439 1286 aa20.66■□□□□ 0.9
SMPD3-203ENST00000563226 MATR3P43243 847 aaKnown RBP eCLIP20.66■□□□□ 0.9
SMPD3-203ENST00000563226 ZBTB41Q5SVQ8 909 aa20.66■□□□□ 0.9
SMPD3-203ENST00000563226 FBXL13Q8NEE6 735 aa20.66■□□□□ 0.9
SMPD3-203ENST00000563226 ZNF516Q92618 1163 aa20.66■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms