RNA–Protein interactions for RNA: ENST00000562542.1

KATNB1-202, Transcript of katanin regulatory subunit B1, humanhuman

TSL 2

Gene KATNB1, Length 512 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KATNB1-202ENST00000562542 FAM170BA6NMN3 283 aa20.64■□□□□ 0.89
KATNB1-202ENST00000562542 MSH4O15457 936 aa20.64■□□□□ 0.89
KATNB1-202ENST00000562542 TGM5O43548 720 aa20.64■□□□□ 0.89
KATNB1-202ENST00000562542 NR1I2O75469 434 aa20.64■□□□□ 0.89
KATNB1-202ENST00000562542 CIITAP33076 1130 aa20.64■□□□□ 0.89
KATNB1-202ENST00000562542 DSG1Q02413 1049 aa20.64■□□□□ 0.89
KATNB1-202ENST00000562542 PFKFB3Q16875 520 aaPredicted RBP20.64■□□□□ 0.89
KATNB1-202ENST00000562542 PARM1Q6UWI2 310 aa20.64■□□□□ 0.89
KATNB1-202ENST00000562542 MIER3Q7Z3K6 550 aa20.64■□□□□ 0.89
KATNB1-202ENST00000562542 CCDC12Q8WUD4 166 aaPredicted RBP20.64■□□□□ 0.89
KATNB1-202ENST00000562542 FGF14Q92915 247 aa20.64■□□□□ 0.89
KATNB1-202ENST00000562542 B3GALT6Q96L58 329 aa20.64■□□□□ 0.89
KATNB1-202ENST00000562542 RIT2Q99578 217 aa20.64■□□□□ 0.89
KATNB1-202ENST00000562542 BRPF3Q9ULD4 1205 aa20.64■□□□□ 0.89
KATNB1-202ENST00000562542 MTF2Q9Y483 593 aaPredicted RBP20.64■□□□□ 0.89
KATNB1-202ENST00000562542 MIA3Q5JRA6 1907 aa20.63■□□□□ 0.89
KATNB1-202ENST00000562542 IGKV6-21A0A0C4DH24 114 aa20.63■□□□□ 0.89
KATNB1-202ENST00000562542 ESYT2A0FGR8 921 aa20.63■□□□□ 0.89
KATNB1-202ENST00000562542 DDX11L8A8MPP1 907 aa20.63■□□□□ 0.89
KATNB1-202ENST00000562542 PRKCQQ04759 706 aa20.63■□□□□ 0.89
KATNB1-202ENST00000562542 SLC44A4Q53GD3 710 aa20.63■□□□□ 0.89
KATNB1-202ENST00000562542 COLGALT2Q8IYK4 626 aa20.63■□□□□ 0.89
KATNB1-202ENST00000562542 GJA10Q969M2 543 aa20.63■□□□□ 0.89
KATNB1-202ENST00000562542 CCDC136Q96JN2 1154 aa20.63■□□□□ 0.89
KATNB1-202ENST00000562542 TCEANC2Q96MN5 208 aa20.63■□□□□ 0.89
KATNB1-202ENST00000562542 ZMYND12Q9H0C1 365 aa20.63■□□□□ 0.89
KATNB1-202ENST00000562542 EPC1Q9H2F5 836 aa20.63■□□□□ 0.89
KATNB1-202ENST00000562542 GMEB2Q9UKD1 530 aa20.63■□□□□ 0.89
KATNB1-202ENST00000562542 WDR81Q562E7 1941 aa20.63■□□□□ 0.89
KATNB1-202ENST00000562542 ZFHX4Q86UP3 3567 aa20.62■□□□□ 0.89
KATNB1-202ENST00000562542 MAFO75444 373 aaPredicted RBP20.62■□□□□ 0.89
KATNB1-202ENST00000562542 ITGA4P13612 1032 aa20.62■□□□□ 0.89
KATNB1-202ENST00000562542 GNA11P29992 359 aa20.62■□□□□ 0.89
KATNB1-202ENST00000562542 MTSS1LQ765P7 747 aa20.62■□□□□ 0.89
KATNB1-202ENST00000562542 GRASPQ7Z6J2 395 aaPredicted RBP20.62■□□□□ 0.89
KATNB1-202ENST00000562542 CEP89Q96ST8 783 aa20.62■□□□□ 0.89
KATNB1-202ENST00000562542 JPH2Q9BR39 696 aaPredicted RBP20.62■□□□□ 0.89
KATNB1-202ENST00000562542 DDX23Q9BUQ8 820 aaKnown RBP20.62■□□□□ 0.89
KATNB1-202ENST00000562542 LSG1Q9H089 658 aaKnown RBP20.62■□□□□ 0.89
KATNB1-202ENST00000562542 UBN1Q9NPG3 1134 aa20.62■□□□□ 0.89
KATNB1-202ENST00000562542 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP20.62■□□□□ 0.89
KATNB1-202ENST00000562542 CDH7Q9ULB5 785 aa20.62■□□□□ 0.89
KATNB1-202ENST00000562542 KLF18A0A0U1RQI7 1052 aa20.61■□□□□ 0.89
KATNB1-202ENST00000562542 F8W810 466 aa20.61■□□□□ 0.89
KATNB1-202ENST00000562542 ADRB1P08588 477 aa20.61■□□□□ 0.89
KATNB1-202ENST00000562542 SRGAP2CP0DJJ0 459 aa20.61■□□□□ 0.89
KATNB1-202ENST00000562542 NCLP19338 710 aaKnown RBP20.61■□□□□ 0.89
KATNB1-202ENST00000562542 CD72P21854 359 aa20.61■□□□□ 0.89
KATNB1-202ENST00000562542 CDC27P30260 824 aa20.61■□□□□ 0.89
KATNB1-202ENST00000562542 MAGEA9P43362 315 aa20.61■□□□□ 0.89
KATNB1-202ENST00000562542 PFKPQ01813 784 aa20.61■□□□□ 0.89
KATNB1-202ENST00000562542 ZBTB41Q5SVQ8 909 aa20.61■□□□□ 0.89
KATNB1-202ENST00000562542 TSSK4Q6SA08 328 aa20.61■□□□□ 0.89
KATNB1-202ENST00000562542 RNF168Q8IYW5 571 aaPredicted RBP20.61■□□□□ 0.89
KATNB1-202ENST00000562542 ZBTB44Q8NCP5 570 aa20.61■□□□□ 0.89
KATNB1-202ENST00000562542 RDM1Q8NG50 284 aa20.61■□□□□ 0.89
KATNB1-202ENST00000562542 SLC5A5Q92911 643 aa20.61■□□□□ 0.89
KATNB1-202ENST00000562542 COLEC11Q9BWP8 271 aa20.61■□□□□ 0.89
KATNB1-202ENST00000562542 OSBPL6Q9BZF3 934 aa20.61■□□□□ 0.89
KATNB1-202ENST00000562542 IFT122Q9HBG6 1241 aa20.61■□□□□ 0.89
KATNB1-202ENST00000562542 LTB4R2Q9NPC1 389 aa20.61■□□□□ 0.89
KATNB1-202ENST00000562542 COL4A3BPQ9Y5P4 624 aa20.61■□□□□ 0.89
KATNB1-202ENST00000562542 COL4A3Q01955 1670 aa20.61■□□□□ 0.89
KATNB1-202ENST00000562542 CACNA1GO43497 2377 aa20.6■□□□□ 0.89
KATNB1-202ENST00000562542 ZMYND10O75800 440 aa20.6■□□□□ 0.89
KATNB1-202ENST00000562542 PAPLNO95428 1278 aa20.6■□□□□ 0.89
KATNB1-202ENST00000562542 RPL17P18621 184 aaKnown RBP20.6■□□□□ 0.89
KATNB1-202ENST00000562542 MLH1P40692 756 aa20.6■□□□□ 0.89
KATNB1-202ENST00000562542 UBXN11Q5T124 520 aa20.6■□□□□ 0.89
KATNB1-202ENST00000562542 CNNM3Q8NE01 707 aa20.6■□□□□ 0.89
KATNB1-202ENST00000562542 BICD2Q8TD16 824 aa20.6■□□□□ 0.89
KATNB1-202ENST00000562542 GAD1Q99259 594 aa20.6■□□□□ 0.89
KATNB1-202ENST00000562542 CHST7Q9NS84 486 aa20.6■□□□□ 0.89
KATNB1-202ENST00000562542 MAP1BP46821 2468 aaKnown RBP20.6■□□□□ 0.89
KATNB1-202ENST00000562542 ARL5CA6NH57 179 aa20.59■□□□□ 0.89
KATNB1-202ENST00000562542 TBC1D4O60343 1298 aa20.59■□□□□ 0.89
KATNB1-202ENST00000562542 STBD1O95210 358 aa20.59■□□□□ 0.89
KATNB1-202ENST00000562542 C1RP00736 705 aa20.59■□□□□ 0.89
KATNB1-202ENST00000562542 SCNN1GP51170 649 aa20.59■□□□□ 0.89
KATNB1-202ENST00000562542 NTHL1P78549 312 aa20.59■□□□□ 0.89
KATNB1-202ENST00000562542 CREMQ03060 361 aa20.59■□□□□ 0.89
KATNB1-202ENST00000562542 USP41Q3LFD5 358 aa20.59■□□□□ 0.89
KATNB1-202ENST00000562542 LIN9Q5TKA1 542 aa20.59■□□□□ 0.89
KATNB1-202ENST00000562542 PLA2G4FQ68DD2 849 aa20.59■□□□□ 0.89
KATNB1-202ENST00000562542 SRGAP1Q7Z6B7 1085 aa20.59■□□□□ 0.89
KATNB1-202ENST00000562542 SLC7A3Q8WY07 619 aa20.59■□□□□ 0.89
KATNB1-202ENST00000562542 FAM217BQ9NTX9 383 aaPredicted RBP20.59■□□□□ 0.89
KATNB1-202ENST00000562542 FNIP2Q9P278 1114 aa20.59■□□□□ 0.89
KATNB1-202ENST00000562542 RAB23Q9ULC3 237 aa20.59■□□□□ 0.89
KATNB1-202ENST00000562542 POLIQ9UNA4 740 aa20.59■□□□□ 0.89
KATNB1-202ENST00000562542 MYH15Q9Y2K3 1946 aa20.59■□□□□ 0.89
KATNB1-202ENST00000562542 PATJQ8NI35 1801 aa20.58■□□□□ 0.89
KATNB1-202ENST00000562542 NCAM2O15394 837 aa20.58■□□□□ 0.89
KATNB1-202ENST00000562542 LILRB5O75023 590 aa20.58■□□□□ 0.89
KATNB1-202ENST00000562542 ERLIN2O94905 339 aa20.58■□□□□ 0.89
KATNB1-202ENST00000562542 EFEMP2O95967 443 aa20.58■□□□□ 0.89
KATNB1-202ENST00000562542 HOXA11P31270 313 aaPredicted RBP20.58■□□□□ 0.89
KATNB1-202ENST00000562542 ADD1P35611 737 aaKnown RBP20.58■□□□□ 0.89
KATNB1-202ENST00000562542 DSC1Q08554 894 aa20.58■□□□□ 0.89
KATNB1-202ENST00000562542 NECTIN1Q15223 517 aa20.58■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms