RNA–Protein interactions for RNA: ENST00000562119.5

PDXDC1-207, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 5

Gene PDXDC1, Length 884 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-207ENST00000562119 PALB2Q86YC2 1186 aa22.52■■□□□ 1.2
PDXDC1-207ENST00000562119 RDM1Q8NG50 284 aa22.52■■□□□ 1.2
PDXDC1-207ENST00000562119 HDAC7Q8WUI4 952 aa22.52■■□□□ 1.2
PDXDC1-207ENST00000562119 B3GALT6Q96L58 329 aa22.52■■□□□ 1.2
PDXDC1-207ENST00000562119 PIDD1Q9HB75 910 aa22.52■■□□□ 1.2
PDXDC1-207ENST00000562119 COL4A3Q01955 1670 aa22.52■■□□□ 1.2
PDXDC1-207ENST00000562119 DDX11L8A8MPP1 907 aa22.51■■□□□ 1.19
PDXDC1-207ENST00000562119 TGM5O43548 720 aa22.51■■□□□ 1.19
PDXDC1-207ENST00000562119 OR1G1P47890 313 aa22.51■■□□□ 1.19
PDXDC1-207ENST00000562119 GPC5P78333 572 aa22.51■■□□□ 1.19
PDXDC1-207ENST00000562119 PLA2G4FQ68DD2 849 aa22.51■■□□□ 1.19
PDXDC1-207ENST00000562119 RASEFQ8IZ41 740 aa22.51■■□□□ 1.19
PDXDC1-207ENST00000562119 SMG8Q8ND04 991 aaKnown RBP22.51■■□□□ 1.19
PDXDC1-207ENST00000562119 PLEKHA4Q9H4M7 779 aa22.51■■□□□ 1.19
PDXDC1-207ENST00000562119 CHST7Q9NS84 486 aa22.51■■□□□ 1.19
PDXDC1-207ENST00000562119 NAP1L2Q9ULW6 460 aaPredicted RBP22.51■■□□□ 1.19
PDXDC1-207ENST00000562119 GAS2O43903 313 aaKnown RBP22.5■■□□□ 1.19
PDXDC1-207ENST00000562119 NCLP19338 710 aaKnown RBP22.5■■□□□ 1.19
PDXDC1-207ENST00000562119 USP11P51784 963 aa22.5■■□□□ 1.19
PDXDC1-207ENST00000562119 DSC1Q08554 894 aa22.5■■□□□ 1.19
PDXDC1-207ENST00000562119 VARS2Q5ST30 1063 aaKnown RBP22.5■■□□□ 1.19
PDXDC1-207ENST00000562119 FGF14Q92915 247 aa22.5■■□□□ 1.19
PDXDC1-207ENST00000562119 PRKD2Q9BZL6 878 aa22.5■■□□□ 1.19
PDXDC1-207ENST00000562119 RNF39Q9H2S5 420 aa22.5■■□□□ 1.19
PDXDC1-207ENST00000562119 ZDHHC7Q9NXF8 308 aa22.5■■□□□ 1.19
PDXDC1-207ENST00000562119 COL4A3BPQ9Y5P4 624 aa22.5■■□□□ 1.19
PDXDC1-207ENST00000562119 PRPF3O43395 683 aaKnown RBP22.49■■□□□ 1.19
PDXDC1-207ENST00000562119 ATXN1P54253 815 aaKnown RBP22.49■■□□□ 1.19
PDXDC1-207ENST00000562119 SNW1Q13573 536 aaKnown RBP22.49■■□□□ 1.19
PDXDC1-207ENST00000562119 ZNF528Q3MIS6 628 aa22.49■■□□□ 1.19
PDXDC1-207ENST00000562119 RNF20Q5VTR2 975 aa22.49■■□□□ 1.19
PDXDC1-207ENST00000562119 LILRA6Q6PI73 481 aa22.49■■□□□ 1.19
PDXDC1-207ENST00000562119 PARM1Q6UWI2 310 aa22.49■■□□□ 1.19
PDXDC1-207ENST00000562119 BICD2Q8TD16 824 aa22.49■■□□□ 1.19
PDXDC1-207ENST00000562119 PHKBQ93100 1093 aa22.49■■□□□ 1.19
PDXDC1-207ENST00000562119 MTF2Q9Y483 593 aaPredicted RBP22.49■■□□□ 1.19
PDXDC1-207ENST00000562119 ARL5CA6NH57 179 aa22.48■■□□□ 1.19
PDXDC1-207ENST00000562119 C1RP00736 705 aa22.48■■□□□ 1.19
PDXDC1-207ENST00000562119 SRGAP2CP0DJJ0 459 aa22.48■■□□□ 1.19
PDXDC1-207ENST00000562119 NPEPPSP55786 919 aa22.48■■□□□ 1.19
PDXDC1-207ENST00000562119 GLYCTKQ8IVS8 523 aa22.48■■□□□ 1.19
PDXDC1-207ENST00000562119 ZNF579Q8NAF0 562 aaKnown RBP22.48■■□□□ 1.19
PDXDC1-207ENST00000562119 PRPF31Q8WWY3 499 aaKnown RBP22.48■■□□□ 1.19
PDXDC1-207ENST00000562119 SHDQ96IW2 340 aa22.48■■□□□ 1.19
PDXDC1-207ENST00000562119 GAD1Q99259 594 aa22.48■■□□□ 1.19
PDXDC1-207ENST00000562119 DDX23Q9BUQ8 820 aaKnown RBP22.48■■□□□ 1.19
PDXDC1-207ENST00000562119 SPATA6Q9NWH7 488 aaPredicted RBP22.48■■□□□ 1.19
PDXDC1-207ENST00000562119 MIOSQ9NXC5 875 aa22.48■■□□□ 1.19
PDXDC1-207ENST00000562119 NCDNQ9UBB6 729 aa22.48■■□□□ 1.19
PDXDC1-207ENST00000562119 IPPQ9Y573 584 aa22.48■■□□□ 1.19
PDXDC1-207ENST00000562119 CCDC196A0A1B0GTZ2 297 aa22.47■■□□□ 1.19
PDXDC1-207ENST00000562119 KANSL1LA0AUZ9 987 aa22.47■■□□□ 1.19
PDXDC1-207ENST00000562119 SPTLC1O15269 473 aa22.47■■□□□ 1.19
PDXDC1-207ENST00000562119 ITGA4P13612 1032 aa22.47■■□□□ 1.19
PDXDC1-207ENST00000562119 MLH1P40692 756 aa22.47■■□□□ 1.19
PDXDC1-207ENST00000562119 Q4G0T1 1027 aa22.47■■□□□ 1.19
PDXDC1-207ENST00000562119 SRGAP1Q7Z6B7 1085 aa22.47■■□□□ 1.19
PDXDC1-207ENST00000562119 JPH2Q9BR39 696 aaPredicted RBP22.47■■□□□ 1.19
PDXDC1-207ENST00000562119 EIF2AQ9BY44 585 aaKnown RBP22.47■■□□□ 1.19
PDXDC1-207ENST00000562119 GPR62Q9BZJ7 368 aa22.47■■□□□ 1.19
PDXDC1-207ENST00000562119 FBXO4Q9UKT5 387 aa22.47■■□□□ 1.19
PDXDC1-207ENST00000562119 CFAP47Q6ZTR5 3102 aa22.46■■□□□ 1.19
PDXDC1-207ENST00000562119 LAMTOR5O43504 91 aa22.46■■□□□ 1.19
PDXDC1-207ENST00000562119 TDP2O95551 362 aa22.46■■□□□ 1.19
PDXDC1-207ENST00000562119 RPL17P18621 184 aaKnown RBP22.46■■□□□ 1.19
PDXDC1-207ENST00000562119 FSHRP23945 695 aa22.46■■□□□ 1.19
PDXDC1-207ENST00000562119 SCNN1GP51170 649 aa22.46■■□□□ 1.19
PDXDC1-207ENST00000562119 TSGA10IPQ3SY00 556 aa22.46■■□□□ 1.19
PDXDC1-207ENST00000562119 TBCKQ8TEA7 893 aa22.46■■□□□ 1.19
PDXDC1-207ENST00000562119 TMEM143Q96AN5 459 aa22.46■■□□□ 1.19
PDXDC1-207ENST00000562119 ZFP42Q96MM3 310 aa22.46■■□□□ 1.19
PDXDC1-207ENST00000562119 BCO2Q9BYV7 579 aa22.46■■□□□ 1.19
PDXDC1-207ENST00000562119 UBN1Q9NPG3 1134 aa22.46■■□□□ 1.19
PDXDC1-207ENST00000562119 VPS54Q9P1Q0 977 aa22.46■■□□□ 1.19
PDXDC1-207ENST00000562119 HES2Q9Y543 173 aa22.46■■□□□ 1.19
PDXDC1-207ENST00000562119 ZMYND10O75800 440 aa22.45■■□□□ 1.18
PDXDC1-207ENST00000562119 PSMC5P62195 406 aa22.45■■□□□ 1.18
PDXDC1-207ENST00000562119 NTHL1P78549 312 aa22.45■■□□□ 1.18
PDXDC1-207ENST00000562119 CSTF1Q05048 431 aaKnown RBP22.45■■□□□ 1.18
PDXDC1-207ENST00000562119 LAMTOR4Q0VGL1 99 aa22.45■■□□□ 1.18
PDXDC1-207ENST00000562119 GRASPQ7Z6J2 395 aaPredicted RBP22.45■■□□□ 1.18
PDXDC1-207ENST00000562119 ETNPPLQ8TBG4 499 aa22.45■■□□□ 1.18
PDXDC1-207ENST00000562119 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP22.45■■□□□ 1.18
PDXDC1-207ENST00000562119 FNIP2Q9P278 1114 aa22.45■■□□□ 1.18
PDXDC1-207ENST00000562119 PCDHGA2Q9Y5H1 932 aa22.45■■□□□ 1.18
PDXDC1-207ENST00000562119 ZFP37Q9Y6Q3 630 aaPredicted RBP22.45■■□□□ 1.18
PDXDC1-207ENST00000562119 CYP3A7-CYP3A51PA0A087WV96 503 aa22.44■■□□□ 1.18
PDXDC1-207ENST00000562119 EML1O00423 815 aa22.44■■□□□ 1.18
PDXDC1-207ENST00000562119 CPA1P15085 419 aa22.44■■□□□ 1.18
PDXDC1-207ENST00000562119 CYP3A7P24462 503 aa22.44■■□□□ 1.18
PDXDC1-207ENST00000562119 UBXN2BQ14CS0 331 aa22.44■■□□□ 1.18
PDXDC1-207ENST00000562119 MLF2Q15773 248 aaPredicted RBP22.44■■□□□ 1.18
PDXDC1-207ENST00000562119 NTRK3Q16288 839 aa22.44■■□□□ 1.18
PDXDC1-207ENST00000562119 SLC44A4Q53GD3 710 aa22.44■■□□□ 1.18
PDXDC1-207ENST00000562119 FUT10Q6P4F1 479 aa22.44■■□□□ 1.18
PDXDC1-207ENST00000562119 ZBTB44Q8NCP5 570 aa22.44■■□□□ 1.18
PDXDC1-207ENST00000562119 CNNM3Q8NE01 707 aa22.44■■□□□ 1.18
PDXDC1-207ENST00000562119 CCDC148Q8NFR7 591 aa22.44■■□□□ 1.18
PDXDC1-207ENST00000562119 PSPC1Q8WXF1 523 aaKnown RBP22.44■■□□□ 1.18
PDXDC1-207ENST00000562119 SLC7A3Q8WY07 619 aa22.44■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms